Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0230
         (785 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0785 - 31985455-31988463                                         30   1.8  
08_01_0944 - 9368901-9369158,9369460-9369839,9370072-9370314,937...    28   9.7  

>01_06_0785 - 31985455-31988463
          Length = 1002

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 575 STTGSETRPTEKIRRETQWAVSRVSSLVEPFSQATGSTR 459
           S T +  R T+K + + QW + R SS  +P + AT   R
Sbjct: 129 SATSTGVRSTQKEKHKRQWGLYRKSSSSQPTTSATSVNR 167


>08_01_0944 -
           9368901-9369158,9369460-9369839,9370072-9370314,
           9370607-9370655
          Length = 309

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 166 VTDVFSRLGYPSASSHKELRSKNY 237
           +T VF RL +PS+SS   +  KN+
Sbjct: 70  ITTVFQRLEFPSSSSSPAITGKNF 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,261,428
Number of Sequences: 37544
Number of extensions: 409303
Number of successful extensions: 843
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)