Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0228
(713 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 120 5e-27
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 119 9e-27
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 119 9e-27
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 119 9e-27
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 119 9e-27
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 119 9e-27
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 119 9e-27
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 119 9e-27
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 119 9e-27
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 119 9e-27
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 119 9e-27
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 119 9e-27
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 119 9e-27
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 118 2e-26
AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein pr... 37 0.062
AL929472-9|CAH70084.1| 159|Homo sapiens chromosome 1 open readi... 31 3.1
AF044309-1|AAC24031.1| 287|Homo sapiens syntaxin 11 protein. 31 5.4
BC101751-1|AAI01752.1| 535|Homo sapiens hypothetical protein LO... 30 9.5
BC101749-1|AAI01750.1| 535|Homo sapiens hypothetical protein LO... 30 9.5
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 120 bits (289), Expect = 5e-27
Identities = 55/90 (61%), Positives = 58/90 (64%)
Frame = +2
Query: 254 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 433
T AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 434 XXXXXXXXXXXXXXXXQARGHIIEKFSSFP 523
++GH IE+F P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEFPELP 151
Score = 99 bits (238), Expect = 8e-21
Identities = 47/66 (71%), Positives = 57/66 (86%)
Frame = +1
Query: 514 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 693
ELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRN RRIQR+GP
Sbjct: 149 ELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN-RRIQRRGPC 207
Query: 694 IIFNKD 711
II+N+D
Sbjct: 208 IIYNED 213
Score = 84.2 bits (199), Expect = 4e-16
Identities = 40/62 (64%), Positives = 49/62 (79%)
Frame = +3
Query: 69 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 248
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 249 HQ 254
HQ
Sbjct: 60 HQ 61
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 119 bits (287), Expect = 9e-27
Identities = 55/90 (61%), Positives = 58/90 (64%)
Frame = +2
Query: 254 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 433
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 434 XXXXXXXXXXXXXXXXQARGHIIEKFSSFP 523
++GH IE+ P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 107 bits (256), Expect = 5e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 505 KVLELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 684
+V ELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 685 GPLIIFNKD 711
GP II+N+D
Sbjct: 206 GPCIIYNED 214
Score = 82.2 bits (194), Expect = 2e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +3
Query: 69 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 248
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 249 HQ 254
HQ
Sbjct: 60 HQ 61
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 119 bits (287), Expect = 9e-27
Identities = 55/90 (61%), Positives = 58/90 (64%)
Frame = +2
Query: 254 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 433
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 434 XXXXXXXXXXXXXXXXQARGHIIEKFSSFP 523
++GH IE+ P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 107 bits (256), Expect = 5e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 505 KVLELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 684
+V ELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 685 GPLIIFNKD 711
GP II+N+D
Sbjct: 206 GPCIIYNED 214
Score = 82.2 bits (194), Expect = 2e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +3
Query: 69 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 248
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 249 HQ 254
HQ
Sbjct: 60 HQ 61
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 119 bits (287), Expect = 9e-27
Identities = 55/90 (61%), Positives = 58/90 (64%)
Frame = +2
Query: 254 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 433
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 434 XXXXXXXXXXXXXXXXQARGHIIEKFSSFP 523
++GH IE+ P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 107 bits (256), Expect = 5e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 505 KVLELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 684
+V ELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 685 GPLIIFNKD 711
GP II+N+D
Sbjct: 206 GPCIIYNED 214
Score = 82.2 bits (194), Expect = 2e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +3
Query: 69 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 248
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 249 HQ 254
HQ
Sbjct: 60 HQ 61
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 119 bits (287), Expect = 9e-27
Identities = 55/90 (61%), Positives = 58/90 (64%)
Frame = +2
Query: 254 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 433
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 434 XXXXXXXXXXXXXXXXQARGHIIEKFSSFP 523
++GH IE+ P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 107 bits (256), Expect = 5e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 505 KVLELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 684
+V ELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 685 GPLIIFNKD 711
GP II+N+D
Sbjct: 206 GPCIIYNED 214
Score = 82.2 bits (194), Expect = 2e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +3
Query: 69 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 248
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 249 HQ 254
HQ
Sbjct: 60 HQ 61
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 119 bits (287), Expect = 9e-27
Identities = 55/90 (61%), Positives = 58/90 (64%)
Frame = +2
Query: 254 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 433
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 434 XXXXXXXXXXXXXXXXQARGHIIEKFSSFP 523
++GH IE+ P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 107 bits (256), Expect = 5e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 505 KVLELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 684
+V ELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 685 GPLIIFNKD 711
GP II+N+D
Sbjct: 206 GPCIIYNED 214
Score = 82.2 bits (194), Expect = 2e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +3
Query: 69 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 248
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 249 HQ 254
HQ
Sbjct: 60 HQ 61
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 119 bits (287), Expect = 9e-27
Identities = 55/90 (61%), Positives = 58/90 (64%)
Frame = +2
Query: 254 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 433
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 434 XXXXXXXXXXXXXXXXQARGHIIEKFSSFP 523
++GH IE+ P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 107 bits (256), Expect = 5e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 505 KVLELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 684
+V ELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 685 GPLIIFNKD 711
GP II+N+D
Sbjct: 206 GPCIIYNED 214
Score = 82.2 bits (194), Expect = 2e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +3
Query: 69 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 248
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 249 HQ 254
HQ
Sbjct: 60 HQ 61
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 119 bits (287), Expect = 9e-27
Identities = 55/90 (61%), Positives = 58/90 (64%)
Frame = +2
Query: 254 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 433
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 434 XXXXXXXXXXXXXXXXQARGHIIEKFSSFP 523
++GH IE+ P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 107 bits (256), Expect = 5e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 505 KVLELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 684
+V ELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 685 GPLIIFNKD 711
GP II+N+D
Sbjct: 206 GPCIIYNED 214
Score = 82.2 bits (194), Expect = 2e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +3
Query: 69 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 248
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 249 HQ 254
HQ
Sbjct: 60 HQ 61
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 119 bits (287), Expect = 9e-27
Identities = 55/90 (61%), Positives = 58/90 (64%)
Frame = +2
Query: 254 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 433
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 434 XXXXXXXXXXXXXXXXQARGHIIEKFSSFP 523
++GH IE+ P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 107 bits (256), Expect = 5e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 505 KVLELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 684
+V ELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 685 GPLIIFNKD 711
GP II+N+D
Sbjct: 206 GPCIIYNED 214
Score = 82.2 bits (194), Expect = 2e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +3
Query: 69 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 248
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 249 HQ 254
HQ
Sbjct: 60 HQ 61
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 119 bits (287), Expect = 9e-27
Identities = 55/90 (61%), Positives = 58/90 (64%)
Frame = +2
Query: 254 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 433
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 434 XXXXXXXXXXXXXXXXQARGHIIEKFSSFP 523
++GH IE+ P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 107 bits (256), Expect = 5e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 505 KVLELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 684
+V ELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 685 GPLIIFNKD 711
GP II+N+D
Sbjct: 206 GPCIIYNED 214
Score = 82.2 bits (194), Expect = 2e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +3
Query: 69 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 248
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 249 HQ 254
HQ
Sbjct: 60 HQ 61
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 119 bits (287), Expect = 9e-27
Identities = 55/90 (61%), Positives = 58/90 (64%)
Frame = +2
Query: 254 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 433
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 434 XXXXXXXXXXXXXXXXQARGHIIEKFSSFP 523
++GH IE+ P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 107 bits (256), Expect = 5e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 505 KVLELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 684
+V ELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 685 GPLIIFNKD 711
GP II+N+D
Sbjct: 206 GPCIIYNED 214
Score = 82.2 bits (194), Expect = 2e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +3
Query: 69 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 248
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 249 HQ 254
HQ
Sbjct: 60 HQ 61
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 119 bits (287), Expect = 9e-27
Identities = 55/90 (61%), Positives = 58/90 (64%)
Frame = +2
Query: 254 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 433
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 76 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 135
Query: 434 XXXXXXXXXXXXXXXXQARGHIIEKFSSFP 523
++GH IE+ P
Sbjct: 136 YAICSALAASALPALVMSKGHRIEEVPELP 165
Score = 107 bits (256), Expect = 5e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 505 KVLELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 684
+V ELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 160 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 219
Query: 685 GPLIIFNKD 711
GP II+N+D
Sbjct: 220 GPCIIYNED 228
Score = 82.6 bits (195), Expect = 1e-15
Identities = 39/63 (61%), Positives = 49/63 (77%)
Frame = +3
Query: 66 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 245
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 246 GHQ 254
GHQ
Sbjct: 73 GHQ 75
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 119 bits (287), Expect = 9e-27
Identities = 55/90 (61%), Positives = 58/90 (64%)
Frame = +2
Query: 254 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 433
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 434 XXXXXXXXXXXXXXXXQARGHIIEKFSSFP 523
++GH IE+ P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 107 bits (256), Expect = 5e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 505 KVLELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 684
+V ELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 685 GPLIIFNKD 711
GP II+N+D
Sbjct: 206 GPCIIYNED 214
Score = 82.2 bits (194), Expect = 2e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +3
Query: 69 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 248
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 249 HQ 254
HQ
Sbjct: 60 HQ 61
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 118 bits (285), Expect = 2e-26
Identities = 55/90 (61%), Positives = 57/90 (63%)
Frame = +2
Query: 254 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 433
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 434 XXXXXXXXXXXXXXXXQARGHIIEKFSSFP 523
+GH IE+ P
Sbjct: 122 YAICSALAASALPALVMPKGHRIEEVPELP 151
Score = 107 bits (256), Expect = 5e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 505 KVLELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 684
+V ELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 685 GPLIIFNKD 711
GP II+N+D
Sbjct: 206 GPCIIYNED 214
Score = 82.2 bits (194), Expect = 2e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +3
Query: 69 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 248
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 249 HQ 254
HQ
Sbjct: 60 HQ 61
>AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein
protein.
Length = 158
Score = 37.1 bits (82), Expect = 0.062
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2
Query: 487 SLNERWDASSSNGCCQGRSPLSEVDATVPAPPGL 386
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>AL929472-9|CAH70084.1| 159|Homo sapiens chromosome 1 open reading
frame 122 protein.
Length = 159
Score = 31.5 bits (68), Expect = 3.1
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 REQGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN--MCRGGRMFAPTKPWRRW 403
RE+G W SA A++R R+ R G G+ G R GR AP+ W RW
Sbjct: 18 REEGAWPRASAGPDRLSLALSRAGRLPAWTAGRRGWGSAGGHPHSRPGRS-APSSCWTRW 76
>AF044309-1|AAC24031.1| 287|Homo sapiens syntaxin 11 protein.
Length = 287
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 385 EALAALAPSRQPPTAESGLGSSRCCYWRPSAR 480
E L A R PPT S ++ CC WR + R
Sbjct: 191 ENLLADVKGRGPPTTRSRAATANCCAWRAAIR 222
>BC101751-1|AAI01752.1| 535|Homo sapiens hypothetical protein
LOC162073 protein.
Length = 535
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 308 GHAEFGQQHVRYPMIRHWLVTSLLAHAVGL-PRVLGHRNVNI 186
GHA F +H R P + L+ S H V L P VLGH ++
Sbjct: 83 GHAAFSSRHFREPGL-SILLESYYEHEVRLSPHVLGHSKAHV 123
>BC101749-1|AAI01750.1| 535|Homo sapiens hypothetical protein
LOC162073 protein.
Length = 535
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 308 GHAEFGQQHVRYPMIRHWLVTSLLAHAVGL-PRVLGHRNVNI 186
GHA F +H R P + L+ S H V L P VLGH ++
Sbjct: 83 GHAAFSSRHFREPGL-SILLESYYEHEVRLSPHVLGHSKAHV 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,749,261
Number of Sequences: 237096
Number of extensions: 2402334
Number of successful extensions: 7326
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7276
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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