Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0227
(465 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-3128|ABI31195.1| 160|Drosophila melanogaster CG34131-P... 48 6e-06
U06460-1|AAC46481.1| 704|Drosophila melanogaster transcription ... 29 3.1
AY118816-1|AAM50676.1| 661|Drosophila melanogaster GH24245p pro... 29 3.1
AY051960-1|AAK93384.1| 704|Drosophila melanogaster LD42828p pro... 29 3.1
AE013599-3405|AAF46854.1| 661|Drosophila melanogaster CG4610-PA... 29 3.1
AE013599-1190|AAF58737.1| 704|Drosophila melanogaster CG7704-PA... 29 3.1
AY058558-1|AAL13787.1| 759|Drosophila melanogaster LD24894p pro... 28 7.1
AE014296-3426|AAF51646.1| 759|Drosophila melanogaster CG3618-PA... 28 7.1
BT012444-1|AAS93715.1| 1657|Drosophila melanogaster RE75049p pro... 27 9.4
AY047499-1|AAK77231.1| 809|Drosophila melanogaster GH01088p pro... 27 9.4
AE014296-2282|AAN11838.1| 809|Drosophila melanogaster CG10732-P... 27 9.4
AE014296-2281|AAF49814.2| 1657|Drosophila melanogaster CG10732-P... 27 9.4
>AE014297-3128|ABI31195.1| 160|Drosophila melanogaster CG34131-PA,
isoform A protein.
Length = 160
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/44 (47%), Positives = 34/44 (77%)
Frame = +3
Query: 9 RKREWDKFIDDMNFKCQRIDNAFEEKEEELRDLYADLKHKLNIA 140
R++ +F+ ++ +RI+N+FEEKEEE+ +LY+DL+ KLNIA
Sbjct: 116 REQRRAEFLTNLEHGYRRIENSFEEKEEEIAELYSDLQLKLNIA 159
>U06460-1|AAC46481.1| 704|Drosophila melanogaster transcription
initiation factorTFIID 85 kDa subunit protein.
Length = 704
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 18 EWDKFIDDMNFKCQRIDNAFEEKEEELRDLYADLKHKLNI 137
E KFIDD +F Q + A++E + D KH+L++
Sbjct: 101 ELAKFIDDDSFDAQHYEQAYKELRTFVEDSLDIYKHELSM 140
>AY118816-1|AAM50676.1| 661|Drosophila melanogaster GH24245p
protein.
Length = 661
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/34 (38%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +2
Query: 308 DFDYFAKTVNLTNEDIELLRTIK-KTISRGSAVK 406
D DYF+K+++L+NE+ + L I+ +TI+ S ++
Sbjct: 606 DIDYFSKSLSLSNEERQKLTLIQPQTIAAASRIQ 639
>AY051960-1|AAK93384.1| 704|Drosophila melanogaster LD42828p
protein.
Length = 704
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 18 EWDKFIDDMNFKCQRIDNAFEEKEEELRDLYADLKHKLNI 137
E KFIDD +F Q + A++E + D KH+L++
Sbjct: 101 ELAKFIDDDSFDAQHYEQAYKELRTFVEDSLDIYKHELSM 140
>AE013599-3405|AAF46854.1| 661|Drosophila melanogaster CG4610-PA
protein.
Length = 661
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/34 (38%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +2
Query: 308 DFDYFAKTVNLTNEDIELLRTIK-KTISRGSAVK 406
D DYF+K+++L+NE+ + L I+ +TI+ S ++
Sbjct: 606 DIDYFSKSLSLSNEERQKLTLIQPQTIAAASRIQ 639
>AE013599-1190|AAF58737.1| 704|Drosophila melanogaster CG7704-PA
protein.
Length = 704
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 18 EWDKFIDDMNFKCQRIDNAFEEKEEELRDLYADLKHKLNI 137
E KFIDD +F Q + A++E + D KH+L++
Sbjct: 101 ELAKFIDDDSFDAQHYEQAYKELRTFVEDSLDIYKHELSM 140
>AY058558-1|AAL13787.1| 759|Drosophila melanogaster LD24894p
protein.
Length = 759
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/30 (30%), Positives = 22/30 (73%)
Frame = +3
Query: 39 DMNFKCQRIDNAFEEKEEELRDLYADLKHK 128
+++F CQR+++ +++ + L +LYA + +K
Sbjct: 414 NVSFTCQRVNDTEQQRSKSLAELYALITNK 443
>AE014296-3426|AAF51646.1| 759|Drosophila melanogaster CG3618-PA
protein.
Length = 759
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/30 (30%), Positives = 22/30 (73%)
Frame = +3
Query: 39 DMNFKCQRIDNAFEEKEEELRDLYADLKHK 128
+++F CQR+++ +++ + L +LYA + +K
Sbjct: 414 NVSFTCQRVNDTEQQRSKSLAELYALITNK 443
>BT012444-1|AAS93715.1| 1657|Drosophila melanogaster RE75049p
protein.
Length = 1657
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +3
Query: 36 DDMNFKCQRIDNAFEEKEEELRDLYADLKHKLNIAD 143
D++ +C+R+ +E+K+ EL Y + + AD
Sbjct: 680 DELRSQCERLRTEYEQKQRELEQRYVASNNTTSEAD 715
>AY047499-1|AAK77231.1| 809|Drosophila melanogaster GH01088p
protein.
Length = 809
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +3
Query: 36 DDMNFKCQRIDNAFEEKEEELRDLYADLKHKLNIAD 143
D++ +C+R+ +E+K+ EL Y + + AD
Sbjct: 402 DELRSQCERLRTEYEQKQRELEQRYVASNNTTSEAD 437
>AE014296-2282|AAN11838.1| 809|Drosophila melanogaster CG10732-PB,
isoform B protein.
Length = 809
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +3
Query: 36 DDMNFKCQRIDNAFEEKEEELRDLYADLKHKLNIAD 143
D++ +C+R+ +E+K+ EL Y + + AD
Sbjct: 402 DELRSQCERLRTEYEQKQRELEQRYVASNNTTSEAD 437
>AE014296-2281|AAF49814.2| 1657|Drosophila melanogaster CG10732-PA,
isoform A protein.
Length = 1657
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +3
Query: 36 DDMNFKCQRIDNAFEEKEEELRDLYADLKHKLNIAD 143
D++ +C+R+ +E+K+ EL Y + + AD
Sbjct: 680 DELRSQCERLRTEYEQKQRELEQRYVASNNTTSEAD 715
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,661,196
Number of Sequences: 53049
Number of extensions: 256174
Number of successful extensions: 851
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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