Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0227
         (465 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g39050.1 68418.m04725 transferase family protein similar to a...    29   1.2  
At1g08550.1 68414.m00948 violaxanthin de-epoxidase precursor, pu...    29   1.5  
At3g20320.2 68416.m02575 mce-related family protein contains Pfa...    28   2.7  
At3g20320.1 68416.m02574 mce-related family protein contains Pfa...    28   2.7  
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '...    27   6.2  
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '...    27   6.2  

>At5g39050.1 68418.m04725 transferase family protein similar to
           anthocyanin 5-aromatic acyltransferase from Gentiana
           triflora GI:4185599, malonyl CoA:anthocyanin
           5-O-glucoside-6'''-O-malonyltransferase from Perilla
           frutescens GI:17980232, Salvia splendens GI:17980234;
           contains Pfam profile PF02458 transferase family
          Length = 348

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +2

Query: 314 DYFAKTVNLTNEDIELLRTIKKTISRGSAVKINNTEI 424
           D F  T+NLT EDI+ LR   K  S  S+V  +  E+
Sbjct: 252 DVFRYTLNLTREDIQKLRERLKKESSSSSVSSSPKEL 288


>At1g08550.1 68414.m00948 violaxanthin de-epoxidase precursor,
           putative (AVDE1) similar to EST gb|N37612
          Length = 462

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 305 KDFDYFAKTVNLTNEDIELLRTIKKTISRGSAVKINNTEIEPEFVEHD 448
           +DF  F +T N    +  L+  I+KT+  G  + +   E   E VE +
Sbjct: 350 RDFSTFIRTDNTCGPEPALVERIEKTVEEGERIIVKEVEEIEEEVEKE 397


>At3g20320.2 68416.m02575 mce-related family protein contains Pfam
           PF02470: mce related protein
          Length = 282

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 114 DLKHKLNIADI*IMDLKGSLVDTNVRIYPTNGFLEYIKEIKDDKV 248
           +L H   I     + ++G  V T +R+ P+   +E + EI+DDK+
Sbjct: 134 ELSHASGICTGTPVRIRGVTVGTIIRVNPSLKNIEAVAEIEDDKI 178


>At3g20320.1 68416.m02574 mce-related family protein contains Pfam
           PF02470: mce related protein
          Length = 381

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 114 DLKHKLNIADI*IMDLKGSLVDTNVRIYPTNGFLEYIKEIKDDKV 248
           +L H   I     + ++G  V T +R+ P+   +E + EI+DDK+
Sbjct: 134 ELSHASGICTGTPVRIRGVTVGTIIRVNPSLKNIEAVAEIEDDKI 178


>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
            'Morpheus molecule') [Arabidopsis thaliana]
            gi|8132770|gb|AAF73381.1|
          Length = 2001

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 57   QRIDNAFEEKEEELRDLYADLKHKL 131
            Q++    EEK+ EL ++YAD K KL
Sbjct: 1140 QKLVQEHEEKKMELLNMYADKKQKL 1164


>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
            'Morpheus molecule') [Arabidopsis thaliana]
            gi|8132770|gb|AAF73381.1|
          Length = 2001

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 57   QRIDNAFEEKEEELRDLYADLKHKL 131
            Q++    EEK+ EL ++YAD K KL
Sbjct: 1140 QKLVQEHEEKKMELLNMYADKKQKL 1164


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,843,421
Number of Sequences: 28952
Number of extensions: 128063
Number of successful extensions: 420
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 782033640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)