Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0225
         (822 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.2  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   6.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -2

Query: 101 AWSRFRLLSSLFVNQTNQSLNSNFFSSTVY-VHN 3
           AW +F  +   F      S +SN+F++  Y  HN
Sbjct: 547 AWDKFTNMQQQFAYIDESSNSSNYFANKTYDFHN 580


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -1

Query: 567 NIYFTVV*SLLRMFVILHMF*LKLLQVTINN 475
           ++YF+V+ SLLR+  ++  +   L  +T NN
Sbjct: 20  SLYFSVIYSLLRVKRMMRSWYYLLTNLTYNN 50


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 402 YIFCIFSCLLLLYSVRSFQIFLITC 476
           Y    F+C+ + Y+  S   F  TC
Sbjct: 168 YFILAFACISIAYTNVSTDAFFYTC 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,177
Number of Sequences: 336
Number of extensions: 4028
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)