Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0225
         (822 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.53 
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        26   1.6  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.5 bits (58), Expect = 0.53
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = -2

Query: 200 CEPAHLSKFFEWF*AYNSCTFYPHNSNLILFHKAWSRFRLLSSLFVNQTN 51
           CEP HL  +  +   Y     YPHN +L        +F  L  L   Q N
Sbjct: 817 CEPGHLKLWDGYSLLYVDGNDYPHNQDLGSAGSCVRKFSTLPILACGQNN 866


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +3

Query: 69  KTGEKSKTRPRFVKQDQVAIMRIECAGVICLEPFKKFAQMGRFTLRDEN 215
           +  E  +TR R   + + A+++I C G   +  FK+   + +  LRD +
Sbjct: 312 RMAEDRRTRLRRESEIEDALLQIYCEGQQNIASFKQAIHVNKHRLRDNS 360


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,168
Number of Sequences: 2352
Number of extensions: 15506
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)