Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0223
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 125 4e-29
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 125 4e-29
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 125 4e-29
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 125 4e-29
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 113 2e-25
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 113 2e-25
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 56 2e-08
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 31 0.70
Z70205-1|CAA94117.2| 460|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 29 2.8
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr... 29 3.7
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 29 3.7
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 4.9
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 4.9
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 4.9
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 4.9
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 6.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 6.5
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 28 8.6
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 28 8.6
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 28 8.6
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 28 8.6
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 8.6
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 8.6
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 8.6
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 125 bits (301), Expect = 4e-29
Identities = 63/88 (71%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 AGIIAIYGLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGV 430
AGII IYGLVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGV
Sbjct: 65 AGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGV 124
Query: 431 RGTAQQPRLFVGMILILIFAEVLGLYDL 514
RGTAQQPRLFVGMILILIF+EVLGLY +
Sbjct: 125 RGTAQQPRLFVGMILILIFSEVLGLYGM 152
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3
Query: 99 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVM 254
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+M
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIM 64
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 125 bits (301), Expect = 4e-29
Identities = 63/88 (71%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 AGIIAIYGLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGV 430
AGII IYGLVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGV
Sbjct: 65 AGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGV 124
Query: 431 RGTAQQPRLFVGMILILIFAEVLGLYDL 514
RGTAQQPRLFVGMILILIF+EVLGLY +
Sbjct: 125 RGTAQQPRLFVGMILILIFSEVLGLYGM 152
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3
Query: 99 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVM 254
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+M
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIM 64
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 125 bits (301), Expect = 4e-29
Identities = 63/88 (71%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 AGIIAIYGLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGV 430
AGII IYGLVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGV
Sbjct: 65 AGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGV 124
Query: 431 RGTAQQPRLFVGMILILIFAEVLGLYDL 514
RGTAQQPRLFVGMILILIF+EVLGLY +
Sbjct: 125 RGTAQQPRLFVGMILILIFSEVLGLYGM 152
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3
Query: 99 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVM 254
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+M
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIM 64
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 125 bits (301), Expect = 4e-29
Identities = 63/88 (71%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 AGIIAIYGLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGV 430
AGII IYGLVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGV
Sbjct: 65 AGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGV 124
Query: 431 RGTAQQPRLFVGMILILIFAEVLGLYDL 514
RGTAQQPRLFVGMILILIF+EVLGLY +
Sbjct: 125 RGTAQQPRLFVGMILILIFSEVLGLYGM 152
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3
Query: 99 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVM 254
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+M
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIM 64
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 113 bits (271), Expect = 2e-25
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 AGIIAIYGLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGV 430
AGI+AIYGLVVAV+++G ++ ANY + F GL G GL AG+AIGI GDAGV
Sbjct: 73 AGIVAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGV 132
Query: 431 RGTAQQPRLFVGMILILIFAEVLGLYDL 514
R +QQPR+FVGMILILIFAEVLGLY +
Sbjct: 133 RALSQQPRMFVGMILILIFAEVLGLYGM 160
Score = 83.4 bits (197), Expect = 2e-16
Identities = 36/53 (67%), Positives = 47/53 (88%)
Frame = +3
Query: 96 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVM 254
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVM
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVM 72
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 113 bits (271), Expect = 2e-25
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 AGIIAIYGLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGV 430
AGI+AIYGLVVAV+++G ++ ANY + F GL G GL AG+AIGI GDAGV
Sbjct: 73 AGIVAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGV 132
Query: 431 RGTAQQPRLFVGMILILIFAEVLGLYDL 514
R +QQPR+FVGMILILIFAEVLGLY +
Sbjct: 133 RALSQQPRMFVGMILILIFAEVLGLYGM 160
Score = 83.4 bits (197), Expect = 2e-16
Identities = 36/53 (67%), Positives = 47/53 (88%)
Frame = +3
Query: 96 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVM 254
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVM
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVM 72
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Frame = +2
Query: 263 IAIYGLVVAVLIAGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGF 400
+AI+G+++A + G L E + P L G++ G GL VG S L G
Sbjct: 102 VAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGL 161
Query: 401 AIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYDL 514
A+GIVG A P LFV +++I IFA +GL+ +
Sbjct: 162 AVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGM 199
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +2
Query: 350 HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYDL 514
H+ AGL +GFS L AG+ I G + + G + PR+ ++ +IF E + ++ +
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGI 107
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Frame = +2
Query: 263 IAIYGLVVAVLIAGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGF 400
+AI+G+++A + G L E + P L G++ G GL VG S L G
Sbjct: 102 VAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGL 161
Query: 401 AIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYDL 514
A+GIVG A P LFV +++I IFA +GL+ +
Sbjct: 162 AVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGM 199
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +2
Query: 350 HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYDL 514
H+ AGL +GFS L AG+ I G + + G + PR+ ++ +IF E + ++ +
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGI 107
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Frame = +1
Query: 10 SECVQIVITVFGTCKYSHI*QTKWLKIIQS-------TDPSLELWGRRLLSSSAPWELPM 168
SE V ++ F TC + + T + +QS ++ W R +L +PW L M
Sbjct: 283 SEAVPLLGVFFHTCNFISVLATSFTVYVQSFHFRNQHVHERMDFWMRFILLEWSPWLLRM 342
Query: 169 ELPSQE 186
++P +E
Sbjct: 343 KMPDRE 348
>Z70205-1|CAA94117.2| 460|Caenorhabditis elegans Hypothetical
protein C11H1.2 protein.
Length = 460
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Frame = +2
Query: 398 FAIGIVGDAGVRGTA-QQPRLFVGM-------ILILIFAEVLGLYDLSSPSTCTQNKRPE 553
F +G++ VRG + FV + I++L FA+++G+Y +SS N PE
Sbjct: 352 FLVGVIAITSVRGLLITMAKFFVSISNVRSSNIIVLGFAQIMGMYFVSSVLLMRMNVPPE 411
Query: 554 HTPLPSPVL 580
+ + + +L
Sbjct: 412 YRKILTRIL 420
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 686 TRVEGCSETLCKVDPLPATTIPVRVFRLR 600
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3603 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3631
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 686 TRVEGCSETLCKVDPLPATTIPVRVFRLR 600
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 686 TRVEGCSETLCKVDPLPATTIPVRVFRLR 600
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 686 TRVEGCSETLCKVDPLPATTIPVRVFRLR 600
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3603 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3631
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 686 TRVEGCSETLCKVDPLPATTIPVRVFRLR 600
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 686 TRVEGCSETLCKVDPLPATTIPVRVFRLR 600
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 432 RTPASPTMPMAKPAARPENPTAKPAPK 352
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 432 RTPASPTMPMAKPAARPENPTAKPAPK 352
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
protein M18.5 protein.
Length = 1134
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 622 GMVVAGSGSTLHRVSEHPSTLVYYICSLL 708
G++V GS S L++ +++ +V Y CSLL
Sbjct: 223 GVIVLGSNSVLYKPNDNLGEVVPYTCSLL 251
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -3
Query: 504 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP 361
RP T A R+R P L PR P T A P +RP T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -3
Query: 504 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP 361
RP T A R+R P L PR P T A P +RP T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 262 YCHLRSGRGCPDCWCPPGASQ 324
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 438 VPRTPASPTMPMAKPAARPENPTAKPAPK 352
VP P PT P +P RPE P +P P+
Sbjct: 96 VPPPPPPPTQPEPEPEPRPE-PQPEPQPE 123
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 262 YCHLRSGRGCPDCWCPPGASQ 324
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 262 YCHLRSGRGCPDCWCPPGASQ 324
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAPK 352
P P +P P AKP RP + PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAPK 352
P P +P P AKP RP + PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +1
Query: 265 CHLRSGR-GCPDCWCPPGASQLPP 333
C L + R GCP C CPP PP
Sbjct: 933 CQLVNDRSGCPFCSCPPVKQASPP 956
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAP 355
P P P P + AA PE+P P P
Sbjct: 187 PAGPPGPAGPAGEDAAAPESPPGPPGP 213
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 755 EQPQQQAAPVWRYVKTSREQM*YTRVEGCSETLCKVDPLPATTIP 621
E+P QQAAP + K ++ + V SET V+P+ TT P
Sbjct: 246 EEPHQQAAPQEKKNKKNKRKSESENVPAASET--PVEPVVETTPP 288
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 755 EQPQQQAAPVWRYVKTSREQM*YTRVEGCSETLCKVDPLPATTIP 621
E+P QQAAP + K ++ + V SET V+P+ TT P
Sbjct: 246 EEPHQQAAPQEKKNKKNKRKSESENVPAASET--PVEPVVETTPP 288
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 755 EQPQQQAAPVWRYVKTSREQM*YTRVEGCSETLCKVDPLPATTIP 621
E+P QQAAP + K ++ + V SET V+P+ TT P
Sbjct: 246 EEPHQQAAPQEKKNKKNKRKSESENVPAASET--PVEPVVETTPP 288
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 755 EQPQQQAAPVWRYVKTSREQM*YTRVEGCSETLCKVDPLPATTIP 621
E+P QQAAP + K ++ + V SET V+P+ TT P
Sbjct: 246 EEPHQQAAPQEKKNKKNKRKSESENVPAASET--PVEPVVETTPP 288
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 755 EQPQQQAAPVWRYVKTSREQM*YTRVEGCSETLCKVDPLPATTIP 621
E+P QQAAP + K ++ + V SET V+P+ TT P
Sbjct: 246 EEPHQQAAPQEKKNKKNKRKSESENVPAASET--PVEPVVETTPP 288
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 755 EQPQQQAAPVWRYVKTSREQM*YTRVEGCSETLCKVDPLPATTIP 621
E+P QQAAP + K ++ + V SET V+P+ TT P
Sbjct: 246 EEPHQQAAPQEKKNKKNKRKSESENVPAASET--PVEPVVETTPP 288
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 755 EQPQQQAAPVWRYVKTSREQM*YTRVEGCSETLCKVDPLPATTIP 621
E+P QQAAP + K ++ + V SET V+P+ TT P
Sbjct: 246 EEPHQQAAPQEKKNKKNKRKSESENVPAASET--PVEPVVETTPP 288
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 755 EQPQQQAAPVWRYVKTSREQM*YTRVEGCSETLCKVDPLPATTIP 621
E+P QQAAP + K ++ + V SET V+P+ TT P
Sbjct: 246 EEPHQQAAPQEKKNKKNKRKSESENVPAASET--PVEPVVETTPP 288
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -2
Query: 439 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 263
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 570 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 629
Query: 262 N 260
N
Sbjct: 630 N 630
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -2
Query: 439 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 263
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 570 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 629
Query: 262 N 260
N
Sbjct: 630 N 630
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -2
Query: 439 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 263
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 609 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 668
Query: 262 N 260
N
Sbjct: 669 N 669
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 435 PRTPASPTM--PMAKPAARPENPTAKPAPK 352
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 435 PRTPASPTM--PMAKPAARPENPTAKPAPK 352
PRTP +P + P +P A P A+P P+
Sbjct: 434 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 463
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 435 PRTPASPTM--PMAKPAARPENPTAKPAPK 352
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 435 PRTPASPTM--PMAKPAARPENPTAKPAPK 352
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,665,780
Number of Sequences: 27780
Number of extensions: 458438
Number of successful extensions: 1594
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1572
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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