Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0223
(776 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipi... 114 5e-26
At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipi... 114 5e-26
At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipi... 114 5e-26
At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipi... 114 5e-26
At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipi... 114 5e-26
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 58 5e-09
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 58 5e-09
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 31 0.64
At5g65910.1 68418.m08296 BSD domain-containing protein contains ... 30 1.5
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 30 1.5
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 30 2.0
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 29 2.6
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 29 2.6
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 29 2.6
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 3.4
At5g42720.1 68418.m05203 glycosyl hydrolase family 17 protein si... 29 4.5
At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 4.5
At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family... 29 4.5
At1g11840.2 68414.m01362 lactoylglutathione lyase, putative / gl... 29 4.5
At1g11840.1 68414.m01361 lactoylglutathione lyase, putative / gl... 29 4.5
At2g31040.1 68415.m03786 ATP synthase protein I -related contain... 28 6.0
At1g54490.1 68414.m06215 5'-3' exoribonuclease (XRN4) identical ... 28 6.0
At4g36550.1 68417.m05190 U-box domain-containing protein low sim... 28 7.9
>At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipid
subunit 3 / V-ATPase 16 kDa proteolipid subunit 3
(AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 114 bits (275), Expect = 5e-26
Identities = 55/88 (62%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 AGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGV 430
AG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGV
Sbjct: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120
Query: 431 RGTAQQPRLFVGMILILIFAEVLGLYDL 514
R AQQP+LFVGMILILIFAE L LY L
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGL 148
Score = 87.4 bits (207), Expect = 9e-18
Identities = 38/54 (70%), Positives = 48/54 (88%)
Frame = +3
Query: 105 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMRVLL 266
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVM +L
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVL 64
>At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipid
subunit 1 / V-ATPase 16 kDa proteolipid subunit 1
(AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 114 bits (275), Expect = 5e-26
Identities = 55/88 (62%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 AGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGV 430
AG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGV
Sbjct: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120
Query: 431 RGTAQQPRLFVGMILILIFAEVLGLYDL 514
R AQQP+LFVGMILILIFAE L LY L
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGL 148
Score = 87.4 bits (207), Expect = 9e-18
Identities = 38/54 (70%), Positives = 48/54 (88%)
Frame = +3
Query: 105 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMRVLL 266
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVM +L
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVL 64
>At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipid
subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
(AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16
kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16
kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}
GI:926929; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 114 bits (275), Expect = 5e-26
Identities = 55/88 (62%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 AGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGV 430
AG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGV
Sbjct: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120
Query: 431 RGTAQQPRLFVGMILILIFAEVLGLYDL 514
R AQQP+LFVGMILILIFAE L LY L
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGL 148
Score = 87.4 bits (207), Expect = 9e-18
Identities = 38/54 (70%), Positives = 48/54 (88%)
Frame = +3
Query: 105 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMRVLL 266
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVM +L
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVL 64
>At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipid
subunit 4 / V-ATPase 16 kDa proteolipid subunit 4
(AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP
synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 166
Score = 114 bits (275), Expect = 5e-26
Identities = 55/88 (62%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 AGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGV 430
AG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGV
Sbjct: 63 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 122
Query: 431 RGTAQQPRLFVGMILILIFAEVLGLYDL 514
R AQQP+LFVGMILILIFAE L LY L
Sbjct: 123 RANAQQPKLFVGMILILIFAEALALYGL 150
Score = 87.4 bits (207), Expect = 9e-18
Identities = 38/54 (70%), Positives = 48/54 (88%)
Frame = +3
Query: 105 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMRVLL 266
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVM +L
Sbjct: 13 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVL 66
>At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipid
subunit 2 / V-ATPase 16 kDa proteolipid subunit 2
(AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP
synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis
thaliana}, nearly identical to vacuolar H+-ATPase
proteolipid (16 kDa) subunit GI:755147 from [Gossypium
hirsutum]
Length = 165
Score = 114 bits (275), Expect = 5e-26
Identities = 55/88 (62%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 AGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGV 430
AG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGV
Sbjct: 62 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 121
Query: 431 RGTAQQPRLFVGMILILIFAEVLGLYDL 514
R AQQP+LFVGMILILIFAE L LY L
Sbjct: 122 RANAQQPKLFVGMILILIFAEALALYGL 149
Score = 87.4 bits (207), Expect = 9e-18
Identities = 38/54 (70%), Positives = 48/54 (88%)
Frame = +3
Query: 105 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMRVLL 266
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVM +L
Sbjct: 12 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVL 65
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Frame = +2
Query: 263 IAIYGLVVAVLIAGALQEPANYPLYK------GFIHLGAGLAVGFSGLAAGFAIGIVGDA 424
+AIYG++VA+++ L+ + +Y G+ +G+ VGF+ L G +GI+G +
Sbjct: 76 VAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIGSS 135
Query: 425 GVRGTAQQPRLFVGMILILIFAEVLGLY 508
AQ LFV +++I IF LGL+
Sbjct: 136 CALSDAQNSTLFVKILVIEIFGSALGLF 163
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 111 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVV 251
F +G A +I S LGAA+G +G+ + ++ P + K++I V+
Sbjct: 25 FSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVI 71
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Frame = +2
Query: 263 IAIYGLVVAVLIAGALQEPANYPLYK------GFIHLGAGLAVGFSGLAAGFAIGIVGDA 424
+AIYG++VA+++ L+ + +Y G+ +G+ VGF+ L G +GI+G +
Sbjct: 74 VAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIGSS 133
Query: 425 GVRGTAQQPRLFVGMILILIFAEVLGLY 508
AQ LFV +++I IF LGL+
Sbjct: 134 CALSDAQNSTLFVKILVIEIFGSALGLF 161
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 111 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVV 251
F +G A +I S LGAA+G +G+ + ++ P + K++I V+
Sbjct: 23 FSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVI 69
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAP 355
P+ +PT P KPA P P KPAP
Sbjct: 53 PKPKPAPTPPKPKPAPAPTPPKPKPAP 79
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAP 355
P+ +PT P KP P P KPAP
Sbjct: 42 PKPTPAPTPPKPKPKPAPTPPKPKPAP 68
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAP 355
P+ +PT P KPA P P KP P
Sbjct: 64 PKPAPAPTPPKPKPAPAPTPPKPKPKP 90
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAP 355
P+ +PT P KP P P KPAP
Sbjct: 86 PKPKPAPTPPNPKPTPAPTPPKPKPAP 112
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAP 355
P +P P KPA P NP PAP
Sbjct: 77 PAPAPTPPKPKPKPAPTPPNPKPTPAP 103
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAP 355
P+ +PT P KP P P KP P
Sbjct: 75 PKPAPAPTPPKPKPKPAPTPPNPKPTP 101
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAP 355
P+ +PT P KP P P KP P
Sbjct: 31 PKPAPAPTPPKPKPTPAPTPPKPKPKP 57
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAPK 352
P+ +PT P KPA P PT P PK
Sbjct: 97 PKPTPAPTPPKPKPAPAPA-PTPAPKPK 123
>At5g65910.1 68418.m08296 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 432
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -3
Query: 663 NPMQGGPATGDDHPCARLQTQIMS---IEARSTGDGSGVCSGRLFCVQVDGDD 514
NP++ D HP + QI+ IE RST S S R VQVD +D
Sbjct: 289 NPVESSDVETDKHPIESKEIQIVDKSVIEERSTSTAS---SSRFINVQVDDED 338
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAP 355
P A P MPMA P P P+ P+P
Sbjct: 78 PMPMAPPPMPMASPPMMPMTPSTSPSP 104
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAPKWMNP 340
P TP PT P P + P+ PT KP P P
Sbjct: 125 PSTPKPPTKP---PPSTPKPPTTKPPPSTPKP 153
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 473 LILIFAEVLGLYDLSSPSTCTQNKRPEHTPLPSP 574
+ L FA + + L++ + C N P+H P+PSP
Sbjct: 9 IALFFALNIIFFTLTAATDCGCNPSPKHKPVPSP 42
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAP 355
P+TPAS + P+A RP P P P
Sbjct: 108 PQTPASVSAPVAPAPTRPPPPAPTPTP 134
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 435 PRTPASPTMPMAKPAARPENPTAKPAP 355
P+TPAS + P+A RP P P P
Sbjct: 108 PQTPASVSAPVAPAPTRPPPPAPTPTP 134
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -3
Query: 438 VPRTPAS-----PTMPMAKPAARPENPTAKPAPKWMNPL 337
VP TP PT P+ KP+ P P KP+P P+
Sbjct: 431 VPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPV 469
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -3
Query: 438 VPRTPAS-----PTMPMAKPAARPENPTAKPAPKWMNPL 337
VP TP PT P+ KP+ P P +P+P P+
Sbjct: 442 VPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPV 480
>At5g42720.1 68418.m05203 glycosyl hydrolase family 17 protein
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 438
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -3
Query: 504 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAPKWMNP 340
RP+ + I + T N P SPT P PAA P T P+ + P
Sbjct: 335 RPDLTMTYDIGLTKTTNYN--QTSMAPLSPTRPRLPPAAAPTRQTLPSPPQMILP 387
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 441 AVPRTPASPTMPMAKPAARPENPTAKPAP 355
A P TP + P P PE+P + PAP
Sbjct: 132 APPTTPITSPSPPTNPPPPPESPPSLPAP 160
>At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1696
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 708 EQGTNVIYKSGRVLRNPMQGGPATGDDHPCARLQTQIMSIEARSTGDGSGV 556
+ + + K +LR P G P P + +Q ++E +STG + V
Sbjct: 1455 QSNNSYVRKGNSLLRKPSHGSPGAALGIPPSAIQLNHFTVEDKSTGSSNMV 1505
>At1g11840.2 68414.m01362 lactoylglutathione lyase, putative /
glyoxalase I, putative highly similar to putative
lactoylglutathione lyase SP:Q39366 from [Brassica
oleracea]
Length = 283
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -3
Query: 702 GTNVIYKSGRVLR--NPMQGGPATGDDHPCARLQTQIMS 592
GT+ +YKSG V++ N GG T + P L T+I+S
Sbjct: 223 GTDDVYKSGEVIKIVNQELGGKITREAGPLPGLGTKIVS 261
>At1g11840.1 68414.m01361 lactoylglutathione lyase, putative /
glyoxalase I, putative highly similar to putative
lactoylglutathione lyase SP:Q39366 from [Brassica
oleracea]
Length = 283
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -3
Query: 702 GTNVIYKSGRVLR--NPMQGGPATGDDHPCARLQTQIMS 592
GT+ +YKSG V++ N GG T + P L T+I+S
Sbjct: 223 GTDDVYKSGEVIKIVNQELGGKITREAGPLPGLGTKIVS 261
>At2g31040.1 68415.m03786 ATP synthase protein I -related contains
weaks similarity to Swiss-Prot:P08443 ATP synthase
protein I [Synechococcus sp.]
Length = 350
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2
Query: 416 GDAGV-RGTAQQPRLFVGMILILIF 487
G GV +G A QPRL V ++L++IF
Sbjct: 267 GARGVAKGAANQPRLLVPVVLVMIF 291
>At1g54490.1 68414.m06215 5'-3' exoribonuclease (XRN4) identical to
XRN4 [Arabidopsis thaliana] GI:11875626; contains Pfam
domain PF03159: Putative 5'-3' exonuclease domain
Length = 947
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 632 SPVAGPPCIGFRSTLPLLYITFVPCSFSHISRP 730
SPV G PCI L + Y+ P SHIS P
Sbjct: 671 SPVNGLPCIEQNRALNVTYL--CPAKHSHISEP 701
>At4g36550.1 68417.m05190 U-box domain-containing protein low
similarity to immediate-early fungal elicitor protein
CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 577
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 432 RTPASPTMPMAKPAARPENPTAKPAPK 352
RT ASPT + P PE P+PK
Sbjct: 534 RTTASPTSQVVTPVTHPEPVKITPSPK 560
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,739,869
Number of Sequences: 28952
Number of extensions: 432316
Number of successful extensions: 1370
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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