Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0221
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50199-3|AAA91263.1| 555|Caenorhabditis elegans Hypothetical pr... 106 2e-23
AM748820-1|CAO72174.1| 555|Caenorhabditis elegans hexosaminidas... 106 2e-23
AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin... 29 4.8
AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cycl... 28 6.3
AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor typ... 28 6.3
>U50199-3|AAA91263.1| 555|Caenorhabditis elegans Hypothetical
protein T14F9.3 protein.
Length = 555
Score = 106 bits (254), Expect = 2e-23
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +2
Query: 2 KMNVFHWHIVDDQSFPYQSERFPDLSRLGAYHETLIYTKENIQTVIDHARNRGIRVIPEF 181
K+NV HWH+VD +SFPY S +FP+L +GAY +Y++E+I VI AR RGIRVIPEF
Sbjct: 200 KLNVLHWHLVDSESFPYTSVKFPELHGVGAYSPRHVYSREDIADVIAFARLRGIRVIPEF 259
Query: 182 DVPGHTRSWGVAKPDLLTHCYDQ 250
D+PGHT SW + LT C+D+
Sbjct: 260 DLPGHTSSWR-GRKGFLTECFDE 281
Score = 55.6 bits (128), Expect = 4e-08
Identities = 19/55 (34%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 MNPIKDSTYTFLQELFHEVQALFPDRYIHIGGDEVD---LDCWESNPEFQRYIQE 432
++P+ ++ + F+ E EV FPD+++H+GGDEV ++CWE N + +++++E
Sbjct: 292 VDPMNEANFDFISEFLEEVTETFPDQFLHLGGDEVSDYIVECWERNKKIRKFMEE 346
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 548 PSEDTIVQVWKENEAPEML----NILRASHQLIYSTGWYLDHLNTGGDWTE 688
P + ++ +WK N E+ NI + +I S WYL+++ G DW +
Sbjct: 389 PDPNAVIHIWKGNTHEEIYEQVKNITSQNFPVIVSACWYLNYIKYGADWRD 439
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 501 KLEPIVWQEVFDEGVPLPKTL 563
K +PI WQEVFD +P P +
Sbjct: 374 KRKPIFWQEVFDNNIPDPNAV 394
>AM748820-1|CAO72174.1| 555|Caenorhabditis elegans hexosaminidase
protein.
Length = 555
Score = 106 bits (254), Expect = 2e-23
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +2
Query: 2 KMNVFHWHIVDDQSFPYQSERFPDLSRLGAYHETLIYTKENIQTVIDHARNRGIRVIPEF 181
K+NV HWH+VD +SFPY S +FP+L +GAY +Y++E+I VI AR RGIRVIPEF
Sbjct: 200 KLNVLHWHLVDSESFPYTSVKFPELHGVGAYSPRHVYSREDIADVIAFARLRGIRVIPEF 259
Query: 182 DVPGHTRSWGVAKPDLLTHCYDQ 250
D+PGHT SW + LT C+D+
Sbjct: 260 DLPGHTSSWR-GRKGFLTECFDE 281
Score = 55.6 bits (128), Expect = 4e-08
Identities = 19/55 (34%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 MNPIKDSTYTFLQELFHEVQALFPDRYIHIGGDEVD---LDCWESNPEFQRYIQE 432
++P+ ++ + F+ E EV FPD+++H+GGDEV ++CWE N + +++++E
Sbjct: 292 VDPMNEANFDFISEFLEEVTETFPDQFLHLGGDEVSDYIVECWERNKKIRKFMEE 346
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 548 PSEDTIVQVWKENEAPEML----NILRASHQLIYSTGWYLDHLNTGGDWTE 688
P + ++ +WK N E+ NI + +I S WYL+++ G DW +
Sbjct: 389 PDPNAVIHIWKGNTHEEIYEQVKNITSQNFPVIVSACWYLNYIKYGADWRD 439
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 501 KLEPIVWQEVFDEGVPLPKTL 563
K +PI WQEVFD +P P +
Sbjct: 374 KRKPIFWQEVFDNNIPDPNAV 394
>AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin
protein 3 protein.
Length = 409
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 563 IVQVWKENEAPEMLNIL--RASHQLIYSTGWYLDHLNTGGDWT 685
+V + NE ++NI RAS ++ W +DH+NT D T
Sbjct: 184 LVSIHSANENRYLMNIASHRASDNVLIGGMWPMDHMNTWVDGT 226
>AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cyclase
protein 23 protein.
Length = 1043
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 277 MNPIKDSTYTFLQELFHEVQALFPDRYIHIGGDEVDLDCWESNPEFQRYIQEHNLTS 447
M+ I+D T TF + H+ + PD + LDCW NPE + I+ L +
Sbjct: 725 MDYIRDGTKTF-RPTVHDRTQIHPDLVALL------LDCWNENPEVRPSIRRVRLNT 774
>AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1073
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 277 MNPIKDSTYTFLQELFHEVQALFPDRYIHIGGDEVDLDCWESNPEFQRYIQEHNLTS 447
M+ I+D T TF + H+ + PD + LDCW NPE + I+ L +
Sbjct: 755 MDYIRDGTKTF-RPTVHDRTQIHPDLVALL------LDCWNENPEVRPSIRRVRLNT 804
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,737,583
Number of Sequences: 27780
Number of extensions: 443005
Number of successful extensions: 1257
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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