Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0220
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.1  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   6.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = -1

Query: 455  TNNWNSK--VATTTRDEQVASASVD 387
            TN+W +K   +TTTR     S  +D
Sbjct: 1180 TNHWQTKTTTSTTTRPTTTVSQLID 1204


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 268 HHHEHMMKLLPADS 227
           HHH H+    P DS
Sbjct: 53  HHHHHLQARPPQDS 66


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 137 HAPLNLTAPSRPIVL 181
           H PLNLT    PI +
Sbjct: 263 HKPLNLTIKKMPIAI 277


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 137 HAPLNLTAPSRPIVL 181
           H PLNLT    PI +
Sbjct: 155 HKPLNLTIKKMPIAI 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,623
Number of Sequences: 336
Number of extensions: 4095
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)