Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0219
         (717 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83116-4|CAB05562.1|  287|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z77657-4|CAB01148.2|  376|Caenorhabditis elegans Hypothetical pr...    28   5.8  

>Z83116-4|CAB05562.1|  287|Caenorhabditis elegans Hypothetical
           protein M01B2.4 protein.
          Length = 287

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -1

Query: 300 IYQIIMSMINGIYFSLEEANCSDNDFNIRHQYFYFFIWHY*PKIQ 166
           I+  + S  N  YFS E      N       +F FFIW+Y  K+Q
Sbjct: 160 IFCAVNSCYNSFYFSSELGVYFVNGAFSATLFFRFFIWNYFSKMQ 204


>Z77657-4|CAB01148.2|  376|Caenorhabditis elegans Hypothetical
           protein F08H9.6 protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -1

Query: 243 NCSDNDF-NIRHQYFYFFIW 187
           N ++N F NI H YFY F+W
Sbjct: 88  NTTNNQFYNIDHSYFYSFMW 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,480,108
Number of Sequences: 27780
Number of extensions: 188125
Number of successful extensions: 323
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 323
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)