Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0218
(807 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328... 46 4e-05
07_01_1036 + 9021395-9021658,9024214-9024690 44 1e-04
08_02_1304 - 26008105-26009070 36 0.050
08_02_1310 - 26037025-26038074 35 0.088
08_01_0027 - 195321-195932,197206-197415 35 0.088
07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644 35 0.088
08_02_1251 - 25592537-25593380,25593589-25593893 34 0.12
06_01_1008 - 7853089-7854147 34 0.12
08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546 33 0.35
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 32 0.47
10_08_0082 + 14713989-14714046,14714109-14714953 31 1.1
08_02_1254 + 25607827-25607865,25608066-25608770 31 1.1
08_01_0797 + 7711772-7712869 31 1.4
04_04_1223 + 31851545-31852609,31854314-31854773,31856201-318562... 31 1.4
08_01_0801 - 7750548-7751708 30 2.5
07_03_0351 + 17082571-17083087,17083135-17083148 29 3.3
10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886 29 5.8
10_08_0129 - 15025076-15025858,15025951-15026283 28 7.6
10_08_0122 - 14982676-14983043,14983957-14985145 28 7.6
10_08_0065 + 14596257-14597417 28 7.6
04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072 28 7.6
>05_03_0604 -
16132173-16132391,16132488-16132556,16132824-16132898,
16132981-16133113,16133188-16133297,16133360-16133407,
16133657-16133983,16135006-16135233,16135360-16135689,
16135780-16136586
Length = 781
Score = 46.0 bits (104), Expect = 4e-05
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 256 VLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 429
V AHKL+LS+ S F +MF M + VF +DV A L+QFMY GE+ V EE
Sbjct: 362 VTHAHKLILSLWSMTFDKMFTNGMKESSASNVFFEDVPVEAFFLLIQFMYSGELKVDIEE 421
Query: 430 L 432
+
Sbjct: 422 I 422
>07_01_1036 + 9021395-9021658,9024214-9024690
Length = 246
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +1
Query: 265 AHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 438
AH+++L+ SP F+ M + M ++ I+ + DVS+ LR + +MY E + ++ +
Sbjct: 83 AHRVILASRSPVFRAMLENEMEESRSGIIKIYDVSYDVLRAFVHYMYTAEALLDEQMASD 142
Query: 439 FISTAEQLQVKGL 477
+ AE+ +VK L
Sbjct: 143 LLVLAEKYEVKNL 155
>08_02_1304 - 26008105-26009070
Length = 321
Score = 35.5 bits (78), Expect = 0.050
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 265 AHKLVLSVCSPYFQE--MFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 438
AH+ VL+ SP F+ + M P V L+D+ + R LL F+Y +V Q E +S
Sbjct: 167 AHRAVLAARSPVFRAELLGSMAEATMPCVTLRDIEPATFRALLHFVY---TDVLQIEGSS 223
Query: 439 FISTAEQLQ 465
ST + LQ
Sbjct: 224 STSTTDLLQ 232
>08_02_1310 - 26037025-26038074
Length = 349
Score = 34.7 bits (76), Expect = 0.088
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 262 QAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 435
+AH+ VL+ SP F+ M P V L+D+ +A R +L F+Y + +ELA
Sbjct: 191 RAHRAVLAARSPVFKAALFGSMAEATAPSVALRDMDPAAFRAVLHFIYTDALPDDIDELA 250
Query: 436 SF 441
F
Sbjct: 251 GF 252
>08_01_0027 - 195321-195932,197206-197415
Length = 273
Score = 34.7 bits (76), Expect = 0.088
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 256 VLQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ 423
VL+AHK +L+ CSP F+ MF + + + + D+ + L+ F+Y G + + Q
Sbjct: 118 VLKAHKAILASCSPVFESMFLHDLKEKESSTININDMCLESCSALIGFIY-GTIKLDQ 174
>07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644
Length = 395
Score = 34.7 bits (76), Expect = 0.088
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 259 LQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 429
+QAHK +L+ SP F+ F NP H ++ ++DV + ++ F+Y E+ E
Sbjct: 197 VQAHKWILAARSPVFKAQFFGPIGNPDLHTVI-VEDVEPLVFKAMVNFIYSDEL-PSIHE 254
Query: 430 LASFIST 450
LA +ST
Sbjct: 255 LAGSVST 261
>08_02_1251 - 25592537-25593380,25593589-25593893
Length = 382
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 265 AHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRDLLQFMYQGE 408
AH+ +L+VCSP F+ + + + + L D+ + LL FMY G+
Sbjct: 237 AHRALLAVCSPVFKALLLSSTAEAAACSITLNDIKPAMFEALLHFMYTGD 286
>06_01_1008 - 7853089-7854147
Length = 352
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 265 AHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQG 405
AHK++L+ SP F F M + V +KD+ S + +L F+Y G
Sbjct: 190 AHKIILAARSPVFMAEFFGPMKESSSQCVEIKDIEASVFKAMLHFIYTG 238
>08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546
Length = 290
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 241 WLPKSVLQAHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN 414
++ + AHK+VL++ SP F+ E+F M ++ +KD+ + LL F+Y ++
Sbjct: 124 YVGEDTFAAHKVVLAMRSPVFKAELFGPMREAGAQVLPIKDIQPDVFKALLHFIYTDSLS 183
Query: 415 V 417
+
Sbjct: 184 I 184
>07_03_1529 +
27491963-27492465,27493045-27493154,27493384-27493510,
27494082-27494430,27494975-27495251,27496236-27496333,
27498090-27498214,27498270-27498326,27498328-27498370,
27498581-27498667,27498802-27498882,27499735-27499901,
27499987-27500098,27500188-27500390,27500473-27500607,
27501106-27501205
Length = 857
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 256 VLQAHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 411
V AHK+VL+ SP F+ ++F M + ++D+ S + LL FMY E+
Sbjct: 321 VFPAHKVVLAARSPVFRAQLFGPMKDKNMKRITIEDMEASVFKALLHFMYWDEL 374
>10_08_0082 + 14713989-14714046,14714109-14714953
Length = 300
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +1
Query: 259 LQAHKLVLSVCSPYFQE----MFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQE 426
L AH+ VL+ SP F+ + K T V ++D+ + LL+FMY + +E
Sbjct: 141 LAAHRCVLAARSPVFKAELYGLMKEGGTAAGAVHIEDIEPRVFKVLLRFMYTDSLPEMEE 200
Query: 427 E 429
E
Sbjct: 201 E 201
>08_02_1254 + 25607827-25607865,25608066-25608770
Length = 247
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 250 KSVLQAHKLVLSVCSPYF--QEMFKMNPTQHPIVFLKDVSHSALRDLLQFMY 399
+++++AH+ VL+ SP F + + M P V L D+ + R LL F+Y
Sbjct: 91 ETLIRAHRAVLAARSPVFSAELLGSMAEGTMPCVTLHDIEPATFRALLHFVY 142
>08_01_0797 + 7711772-7712869
Length = 365
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 265 AHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMY 399
AHKLVL+ SP F+ F +M + +KD+ S R LL F+Y
Sbjct: 205 AHKLVLAARSPVFKAEFYGEMIERGTFSIDIKDMQPSVFRALLHFIY 251
>04_04_1223 +
31851545-31852609,31854314-31854773,31856201-31856250,
31856333-31856463,31856569-31856665,31856759-31856950,
31857121-31857123
Length = 665
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 256 VLQAHKLVLSVCSPYF--QEMFKMNPTQHPIVFLKDVSHSALRDLLQFMY 399
VL+AH+ VL+ SP F + + M T P + + V +A LL+F+Y
Sbjct: 204 VLRAHRCVLAARSPVFDAELLGPMMETTAPCIEIHGVEPAAFEALLRFVY 253
>08_01_0801 - 7750548-7751708
Length = 386
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +1
Query: 268 HKLVLSVCSPYFQ-EMFKM--NPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 417
HKLVL++ SP F+ E+ + P PI + D+ + R LLQF+Y + V
Sbjct: 215 HKLVLAMRSPVFKAELCGLLREPGTQPITIV-DMQPAVFRALLQFIYTDQFPV 266
>07_03_0351 + 17082571-17083087,17083135-17083148
Length = 176
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -3
Query: 289 ILIELIYVLAIHSSAANVTSTRSPRDSRP*KPADIFAWKLFQHSENCSS 143
+L+ L+++LA ++ A T P + +P + D+F +LF + N S+
Sbjct: 9 LLLLLLFLLAAATATATATGNALPPEPKPARWPDVFHARLFTNLTNHSA 57
>10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886
Length = 334
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 265 AHKLVLSVCSPYFQ-EMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 429
AH+ VL+ SP F E+F + + +V + D+ + LL+FMY + +EE
Sbjct: 174 AHRCVLAAQSPVFSAELFGPMKDSDRAGVVRIDDMEAQVFKALLRFMYTDSLPEMEEE 231
>10_08_0129 - 15025076-15025858,15025951-15026283
Length = 371
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +1
Query: 265 AHKLVLSVCSPYF-QEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGE-VNVKQEE 429
AH+LVL+V SP F E F K + ++ + D+ + LL F+Y + + QEE
Sbjct: 180 AHRLVLAVRSPVFVAEHFGPMKEGVNVNDVIEINDMDAQVFKALLNFIYTDTLLEMDQEE 239
Query: 430 LAS 438
A+
Sbjct: 240 DAT 242
>10_08_0122 - 14982676-14983043,14983957-14985145
Length = 518
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +1
Query: 265 AHKLVLSVCSPYF-QEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGE-VNVKQEE 429
AH+LVL+V SP F E F K + ++ + D+ + LL F+Y + + QEE
Sbjct: 208 AHRLVLAVRSPVFVAEHFGPMKEGVNVNDVIEINDMDAQVFKALLNFIYTDTLLEMDQEE 267
Query: 430 LAS 438
A+
Sbjct: 268 DAT 270
>10_08_0065 + 14596257-14597417
Length = 386
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 250 KSVLQAHKLVLSVCSPYFQ-EMF--KMNPTQHPIVFLKDVSHSALRDLLQFMY 399
K V AH+LVL+ SP F+ E++ T + + D+ +L F+Y
Sbjct: 199 KKVFDAHRLVLAARSPVFKAELYGRMKESTTKSAIAIDDMEEEVFEAMLTFIY 251
>04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072
Length = 414
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 289 CSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN-VKQEEL 432
C P + F T++P+VFL+ + + DLLQ + V+ K+ EL
Sbjct: 253 CEPRKEIFFTERNTENPLVFLRFLVSTPWGDLLQIKFSRRVHRTKRLEL 301
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,293,575
Number of Sequences: 37544
Number of extensions: 395483
Number of successful extensions: 1192
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -