Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0216
         (436 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5Q1M8 Cluster: Signal peptidase; n=4; Plasmodium (Vinc...    35   0.86 
UniRef50_A7T5I0 Cluster: Predicted protein; n=1; Nematostella ve...    33   2.0  
UniRef50_Q22XV6 Cluster: Insect antifreeze protein; n=3; Eukaryo...    33   3.5  
UniRef50_Q23R47 Cluster: Putative uncharacterized protein; n=2; ...    32   6.0  
UniRef50_Q3YN10 Cluster: Putative uncharacterized protein; n=1; ...    31   8.0  
UniRef50_Q1EPA8 Cluster: U-box domain-containing protein; n=1; M...    31   8.0  
UniRef50_Q8IBG1 Cluster: Dynein heavy chain, putative; n=2; Plas...    31   8.0  

>UniRef50_Q5Q1M8 Cluster: Signal peptidase; n=4; Plasmodium
           (Vinckeia)|Rep: Signal peptidase - Plasmodium yoelii
          Length = 346

 Score = 34.7 bits (76), Expect = 0.86
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = -2

Query: 342 NFNLNISSYYFKSRYKTQRTALESFFFSKLAIKFKFERTKN 220
           ++N+N   +Y ++ Y ++    ESFF+SK+ +KF    TKN
Sbjct: 16  DYNMNRYYHYIRNIYSSKCFKNESFFYSKINLKFVSYNTKN 56


>UniRef50_A7T5I0 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 132

 Score = 33.5 bits (73), Expect = 2.0
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +2

Query: 44  CRFSENLPIIMTYNILWDFQN*MCACMGYHMKCSDKRGSSEKLSLNLSC 190
           C  S N+P +M++N+     + M   M ++M C        K+S N+SC
Sbjct: 15  CMMSHNMPYMMSHNMPCIMSHNMPCMMSHNMPCKMSHNMPCKMSHNMSC 63



 Score = 32.7 bits (71), Expect = 3.5
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 44  CRFSENLPIIMTYNILWDFQN*MCACMGYHMKCSDKRGSSEKLSLNLSC 190
           C  S N+P  M++N+     + M   M ++M C        K+S N+SC
Sbjct: 39  CMMSHNMPCKMSHNMPCKMSHNMSCMMSHNMPCKMLHNMPCKMSHNMSC 87



 Score = 31.9 bits (69), Expect = 6.0
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +2

Query: 44  CRFSENLPIIMTYNILWDFQN*MCACMGYHMKCSDKRGSSEKLSLNLSC 190
           C  S N+P +M++N+ +   + M   M ++M C        K+S N+ C
Sbjct: 7   CIMSHNMPCMMSHNMPYMMSHNMPCIMSHNMPCMMSHNMPCKMSHNMPC 55


>UniRef50_Q22XV6 Cluster: Insect antifreeze protein; n=3;
            Eukaryota|Rep: Insect antifreeze protein - Tetrahymena
            thermophila SB210
          Length = 8517

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 11/68 (16%)
 Frame = -2

Query: 339  FNLNISSYYFKSRYK-----TQRTALESFFFSKLAIKFKFERT---KNT---FINSINFV 193
            F+LNI+   FKS YK     TQ   L++   S   I F+++ T   K T   F N+ N  
Sbjct: 1157 FSLNINLPQFKSNYKGFQFNTQLAILDNMTLSYDYILFQYQGTTVQKKTFGIFSNTTNSC 1216

Query: 192  AHDKFSDS 169
            A+ KFSDS
Sbjct: 1217 ANPKFSDS 1224


>UniRef50_Q23R47 Cluster: Putative uncharacterized protein; n=2;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1453

 Score = 31.9 bits (69), Expect = 6.0
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -2

Query: 300  YKTQRTALESFFFSKLAIKFKFERTKNTFINSINFVAHDKFSDSFSE 160
            Y  Q   L+S + +K A+K  F      FIN +N + ++K+   +S+
Sbjct: 968  YDIQVLILDSIYHTKFAVKVNFYYEMLYFINFLNVMMYNKYDGGYSQ 1014


>UniRef50_Q3YN10 Cluster: Putative uncharacterized protein; n=1;
           Bacillus thuringiensis serovar kurstaki|Rep: Putative
           uncharacterized protein - Bacillus thuringiensis subsp.
           kurstaki
          Length = 433

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -2

Query: 333 LNISSYYFKSRYKTQRTALESFFFSKLAIKFKF-ERTKNTFINSINFVAHDKFSDSF 166
           + + S+Y K   K      ES+FF++   +  +  R +N F+NS N++   ++ D F
Sbjct: 320 IKVFSWYSKHE-KRLIVNTESYFFAREIKEMNYPNRVENNFLNSTNYLIEKEYDDRF 375


>UniRef50_Q1EPA8 Cluster: U-box domain-containing protein; n=1; Musa
           acuminata|Rep: U-box domain-containing protein - Musa
           acuminata (Banana)
          Length = 623

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 112 HLILKIPKNVIRHYDGEILTKSAKANWLFVTELID 8
           HL LKI +N+ RH +G      AKA    + EL+D
Sbjct: 471 HLCLKIIQNISRHEEGATTVVKAKACLAAIVELLD 505


>UniRef50_Q8IBG1 Cluster: Dynein heavy chain, putative; n=2;
            Plasmodium|Rep: Dynein heavy chain, putative - Plasmodium
            falciparum (isolate 3D7)
          Length = 4971

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = -2

Query: 396  ILTCFQMPYTSAIQIQ*FNFNLNISSYYFKSRYKTQRTALESF-FFSKLAIKFKFERTKN 220
            IL C Q+ +T+ I+ +  NF+ N         +K+++  L    F +   +K K  RT+ 
Sbjct: 1837 ILLCLQILWTTNIENELINFSKNPPDESNTLFHKSEKICLNLLEFLAVNVVKQKDHRTRQ 1896

Query: 219  TFINSINFVAHDK 181
             F+  I  + H +
Sbjct: 1897 KFVQMITELVHQR 1909


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,945,069
Number of Sequences: 1657284
Number of extensions: 6048076
Number of successful extensions: 15220
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15211
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)