Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0216
         (436 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   0.54 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   6.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    20   8.9  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    20   8.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    20   8.9  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 0.54
 Identities = 7/33 (21%), Positives = 19/33 (57%)
 Frame = -2

Query: 330 NISSYYFKSRYKTQRTALESFFFSKLAIKFKFE 232
           + + + F + +  QRT   +F+ + + + +KF+
Sbjct: 447 SFTKFEFNTVFNDQRTVFANFYDAMICVAYKFD 479


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 146 QNTSCDNPYTHTFNSENPKECYT 78
           Q TS DNP T  F      +C+T
Sbjct: 685 QWTSSDNPCTTCFCENGNNKCFT 707


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 351 VFVWLRYTASGNTSESL 401
           VF+ LR  + G TSE+L
Sbjct: 321 VFIQLRRPSDGATSEAL 337


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 333 LNISSYYFKSRYKTQRTALES 271
           +NI    FKSRYK     LE+
Sbjct: 189 INILIRSFKSRYKDLNQKLET 209


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 149 YQNTSCDNPYTHTFNSENP 93
           Y N   ++PY +T + E P
Sbjct: 39  YSNYHYEDPYGYTGSEETP 57


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 149 YQNTSCDNPYTHTFNSENP 93
           Y N   ++PY +T + E P
Sbjct: 39  YSNYHYEDPYGYTGSEETP 57


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 149 YQNTSCDNPYTHTFNSENP 93
           Y N   ++PY +T + E P
Sbjct: 39  YSNYHYEDPYGYTGSEETP 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,049
Number of Sequences: 336
Number of extensions: 1835
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)