Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0216
         (436 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0473 - 18168147-18169396,18169756-18169878,18170002-18170065     28   2.9  
04_04_1574 - 34536744-34537136,34541247-34541405,34541497-345424...    28   3.8  
12_02_0456 - 19222153-19222311,19223005-19223379,19223926-192240...    27   5.0  
07_03_1418 - 26421341-26421527,26421618-26423157,26424293-26424524     27   8.7  

>10_08_0473 - 18168147-18169396,18169756-18169878,18170002-18170065
          Length = 478

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 282 ALESFFFSKLAIKFKFERTKNTFINSINFVAHDK 181
           AL++ +  K  ++    R KNTF+ ++  + HDK
Sbjct: 441 ALKTTYLDKQNVRPHLGRLKNTFLQALKLLPHDK 474


>04_04_1574 - 34536744-34537136,34541247-34541405,34541497-34542411,
            34543642-34543731,34544324-34544390,34544483-34544676,
            34544770-34545510,34545596-34545661,34545783-34545908,
            34545978-34546073,34546153-34546521,34546602-34546724,
            34546802-34546906,34547394-34547531,34547665-34547760,
            34548018-34548275
          Length = 1311

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 12/22 (54%), Positives = 19/22 (86%), Gaps = 3/22 (13%)
 Frame = -3

Query: 209  IPLI---SSRMTNLAIVFLNYR 153
            +PLI   +SR+TN++IVF+NY+
Sbjct: 1079 VPLIFASTSRLTNISIVFINYQ 1100


>12_02_0456 -
           19222153-19222311,19223005-19223379,19223926-19224047,
           19224119-19224162,19224296-19224354,19224431-19224498,
           19224707-19224851,19225243-19225440
          Length = 389

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 15/58 (25%), Positives = 28/58 (48%)
 Frame = +2

Query: 116 ACMGYHMKCSDKRGSSEKLSLNLSCATKLMELINVFFVRSNLNFIASLEKKKLSNAVL 289
           AC+G  +  S+   + EKLS  + C     E++ +     N  +I   E ++L+  +L
Sbjct: 115 ACLGSLVHSSNAADNQEKLSSAMFCLNSTSEILKIL---KNNTYIRDTENEELTKHLL 169


>07_03_1418 - 26421341-26421527,26421618-26423157,26424293-26424524
          Length = 652

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -1

Query: 151 FIRTLHVITHTRTHLILKIPKNVIRHYDGEILTKSAKANWLF 26
           F   LH +T  R +++L  P NV      + LT +AK+ WL+
Sbjct: 113 FSNALHKLTMRRYNILLAQPPNV-----SQALTAAAKSVWLW 149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,185,916
Number of Sequences: 37544
Number of extensions: 144883
Number of successful extensions: 255
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)