Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0214
         (657 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   3.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.9  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 15/51 (29%), Positives = 19/51 (37%)
 Frame = +3

Query: 309 PSHQNGMYGLHHGVHHXNSFDNVTSLPNLLRQNGIMTGIIGKKHVGPSSVY 461
           P HQN   G H G +  N   +       L       G  GKK   P ++Y
Sbjct: 78  PMHQNSYTGYHLGSYAANCPPSPKDDEKCLSLERPSGGGKGKKMRKPRTIY 128


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 286 RLGEQLLTDVKHC*TTGRFALIHLY 212
           +LGE L+T   H    G    +H+Y
Sbjct: 384 KLGEDLVTHSGHKLAKGSIVNLHIY 408


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -3

Query: 343 WCSPYI 326
           WCSPYI
Sbjct: 488 WCSPYI 493


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,265
Number of Sequences: 336
Number of extensions: 3336
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)