Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0214
(657 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43688| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_58751| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_4812| Best HMM Match : Sulfatase (HMM E-Value=0) 38 0.007
SB_35679| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.067
SB_38453| Best HMM Match : Sulfatase (HMM E-Value=3.1e-06) 35 0.067
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_24966| Best HMM Match : Sulfatase (HMM E-Value=9e-39) 33 0.15
SB_2379| Best HMM Match : Sulfatase (HMM E-Value=0.00017) 31 0.62
SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05) 29 2.5
SB_671| Best HMM Match : Pneumo_matrix (HMM E-Value=3.9) 29 2.5
SB_10468| Best HMM Match : DUF1056 (HMM E-Value=1.1) 29 2.5
SB_45124| Best HMM Match : Sulfatase (HMM E-Value=0.17) 29 3.3
SB_39420| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_13395| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_53393| Best HMM Match : RVT_1 (HMM E-Value=5.8e-30) 28 7.7
SB_59754| Best HMM Match : rve (HMM E-Value=8e-19) 28 7.7
>SB_43688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +1
Query: 55 IMRVTGIKLALIFYFFITETVLS----DKVRNVLLLLADDGGFEIGAYRNKICQTPNIDE 222
+ + T +KL+L+ + + L+ + NVLL++ADD +G Y ++ QTP +D
Sbjct: 715 VNKYTMLKLSLVVSLMCSTSFLTANQESRPPNVLLIIADDLRASLGCYGHRFIQTPYLDS 774
Query: 223 LARNGLLFNNASHQ*AV 273
LA + F ++ Q AV
Sbjct: 775 LAVRSVRFTTSASQIAV 791
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 536 LAREFIASANKENKPFFLYVAFHDPH 613
L R+ + +KPFFL + FH PH
Sbjct: 861 LLRQLANQPHDASKPFFLAIGFHKPH 886
>SB_58751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/40 (50%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = +1
Query: 136 NVLLLLADDGGF-EIGAYRNKICQTPNIDELARNGLLFNN 252
++L +LADD G+ ++G + +KI QTPNID LA NG++ +N
Sbjct: 10 HLLFVLADDLGWSDVGFHGSKI-QTPNIDRLAANGVILDN 48
>SB_4812| Best HMM Match : Sulfatase (HMM E-Value=0)
Length = 1040
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Frame = +1
Query: 73 IKLALIFYFFITETVL--SDKVR-NVLLLLADDGGF-EIGAYRNKICQTPNIDELARNG 237
I++A + + VL S K R N+++LL DD G +IG + N +TP+ID+LAR G
Sbjct: 7 IQIAGLMLILLAVLVLPCSAKQRPNIVILLVDDLGIADIGCFGNDTIRTPHIDKLAREG 65
Score = 35.1 bits (77), Expect = 0.051
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Frame = +3
Query: 267 SSCSPSRAALLTGSPSHQNGMYGLHHG--------VHHXNSFD---NVTSLPNLLRQNGI 413
S C+PSRAALLTG + G+ G + NS N T+ L + G
Sbjct: 527 SICTPSRAALLTGRYPVRTGLVPSRGGLSEYIRVIIFTANSGGLPRNETTFAKALLETGY 586
Query: 414 MTGIIGKKHVGPS--SVYQFDY 473
TG++GK H+G S +V F Y
Sbjct: 587 STGLVGKWHLGLSRDTVDDFHY 608
Score = 31.9 bits (69), Expect = 0.47
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Frame = +3
Query: 273 CSPSRAALLTGSPSHQNGMYGLHHG----VHHXNSF---DNVTSLPNLLRQNGIMTGII 428
C+PSRAA +TG + + GM VH+ S N T+ LL NG MTGI+
Sbjct: 78 CTPSRAAFMTGRYAVRLGMAAKPEECEVFVHNAASGGLPQNETTFAELLSGNGYMTGIV 136
>SB_35679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 34.7 bits (76), Expect = 0.067
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 79 LALIFYFFITETVLS---DKVRNVLLLLADDGGF-EIGAYRNKICQTPNIDELARNGLLF 246
+A+ FY F+ + + K +++ + DD G+ ++G + +TPNID LA G++
Sbjct: 1 MAVFFYVFVASMLTACHAAKPPHIVFIFVDDLGWSDVGYHNITDLKTPNIDRLAGEGVVL 60
Query: 247 NNASHQ*AVAPQVG 288
N Q P G
Sbjct: 61 ENYYVQPICTPARG 74
>SB_38453| Best HMM Match : Sulfatase (HMM E-Value=3.1e-06)
Length = 473
Score = 34.7 bits (76), Expect = 0.067
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 73 IKLALIFYFFITETVLSDKVRNVLLLLADDGGF-EIGAYRNKICQTPNIDELARNGLLFN 249
+ +AL T ++ S K ++LL++ DD G+ ++G + +TPNID LA G +
Sbjct: 3 VLIALAIALLSTVSIAS-KSPHILLVVVDDLGWSDVGYHNITDLKTPNIDRLAAQGTILE 61
Query: 250 N 252
N
Sbjct: 62 N 62
>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1240
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +1
Query: 127 KVRNVLLLLADDGGFE-IGAYRNKICQTPNIDELARNGLLFNN 252
K ++++++ADD G++ I + + TPN+D LA +G++ NN
Sbjct: 148 KPPHIIMVVADDLGWDDISFHGSPQIPTPNLDALANSGVILNN 190
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 276 SPSRAALLTGS-PSHQNGMYGLHHGVHHXNSFDNVTSLPNLLRQNGIMTGIIGKKHVG 446
+PSRA+ +TG P H + H LP LR+ G T +GK +G
Sbjct: 198 TPSRASFMTGKYPIHMGVQHDTLHNRQPFGVPLTEKFLPEFLREMGYQTHAVGKWQLG 255
>SB_24966| Best HMM Match : Sulfatase (HMM E-Value=9e-39)
Length = 671
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 136 NVLLLLADDGGF-EIGAYRNKICQTPNIDELAR 231
N ++ L DD G +IG + N TPNID+LAR
Sbjct: 194 NFVIFLVDDLGIGDIGCFGNDTINTPNIDKLAR 226
>SB_2379| Best HMM Match : Sulfatase (HMM E-Value=0.00017)
Length = 301
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 273 CSPSRAALLTGS-PSHQNGMYGLHHGVHHXNSFDNVTSLPNLLRQNGIMTGIIGKKHVG 446
C+P+RA+L+TG P + + G T+ P ++ G +T IGK H+G
Sbjct: 141 CTPTRASLMTGKHPMNLGVQHATVFGTQPYGLPLGETTTPQYMKSLGYVTHGIGKWHLG 199
>SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)
Length = 492
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 127 KVRNVLLLLADDGGFEIGAYRN--KICQTPNIDELARNGLLFNNASHQ*AVAPQVG 288
K +++ +L DD G+ Y N +TPNID+LA G+ + Q P G
Sbjct: 9 KPPHIMFILMDDLGWSDVGYHNISHAVKTPNIDKLASQGVKLMSYYSQPMCTPSRG 64
>SB_671| Best HMM Match : Pneumo_matrix (HMM E-Value=3.9)
Length = 907
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 237 PVVQQCFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVH 353
PVV+ + + S+ P T P H G Y + H +H
Sbjct: 141 PVVRTQYNTTSTSHPWYVLNTTRHPHHTRGTYSIQHDIH 179
>SB_10468| Best HMM Match : DUF1056 (HMM E-Value=1.1)
Length = 320
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -2
Query: 257 EALLNNRPFRANSSIFGV*HILLRYAPISKPPSSANSKRTLRTLSDNTVS 108
E LL + +++ +FGV ++ + YAPIS SAN K L S T S
Sbjct: 122 EVLLKTKIWQSRFPVFGVLYMFV-YAPISIKVVSANGKWRLANGSSTTES 170
>SB_45124| Best HMM Match : Sulfatase (HMM E-Value=0.17)
Length = 418
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 539 AREFIASANKENKPFFLYVAFHDPHRCGHSDPQYGP 646
A + I + NK ++P FLY+A PH DP P
Sbjct: 20 ALKVIENHNK-SEPLFLYIAHQAPHSANPHDPLQAP 54
>SB_39420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 993
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 TSLPNLLRQNGIMTGIIGKKHVGPSSVYQFDYEQTE 485
++LP L+Q G T I+GK H+G Y+ D+ T+
Sbjct: 612 STLPEQLKQQGYATHIVGKWHLG---FYKEDFVPTK 644
>SB_13395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 484 SVCS*SN*YTLEGPTCFLPIIPVIIPFWRSK 392
++C Y LEG +P +P++ P+W K
Sbjct: 1040 AICKQEKTYCLEGWPPIMPSLPLLKPYWEKK 1070
>SB_53393| Best HMM Match : RVT_1 (HMM E-Value=5.8e-30)
Length = 1246
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -3
Query: 553 DELPGEQLHVGDVATT*LMWLFSSVCS*SN*YTLEGPTCFLPIIPVIIPFWRSK 392
+ LP +L + D+ ++C Y LEG +P +P++ P+W K
Sbjct: 854 ESLPATELRLKDIQEA---QDCDAICKQVKTYCLEGWPPIMPSLPLLKPYWEKK 904
>SB_59754| Best HMM Match : rve (HMM E-Value=8e-19)
Length = 1065
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 484 SVCS*SN*YTLEGPTCFLPIIPVIIPFWRSK 392
++C Y LEG +P +P++ P+W K
Sbjct: 550 AICKQVKTYCLEGWPPIMPCLPLLKPYWEKK 580
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,348,810
Number of Sequences: 59808
Number of extensions: 402044
Number of successful extensions: 972
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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