Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0214
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    41   4e-05
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   4.9  
AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding pr...    23   8.5  

>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 40.7 bits (91), Expect = 4e-05
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +3

Query: 246 QQCFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHHXNSFDNVTSLPNLLRQNGIMTGI 425
           Q  F   + C+PSR ++LTG       +Y  +   +   +  N T+LP   +Q+G  T  
Sbjct: 70  QNAFAQQALCAPSRNSMLTGRRPDTVRLYDFYS--YWRQTSGNYTTLPQYFKQHGYRTHS 127

Query: 426 IGKK-HVGPSSVYQFDY 473
           +GK  H G SS +  D+
Sbjct: 128 VGKVFHPGASSNFTDDF 144



 Score = 32.7 bits (71), Expect = 0.010
 Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
 Frame = +1

Query: 79  LALIFYFFITETVLSDKVRNVLLLLADDGGFEIG-AYRNKICQTPNIDELARNGLLFNNA 255
           L L F    T T       NVLL++ DD    I   Y +    T NID L + G  F NA
Sbjct: 13  LCLTFLISTTATQRPPDQPNVLLIILDDFRPVINYGYGDGNAITVNIDRLVQQGFFFQNA 72

Query: 256 SHQ*AVAPQVGQHS*LGRR 312
             Q A+          GRR
Sbjct: 73  FAQQALCAPSRNSMLTGRR 91


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 194 LLRYAPISK-PPSSANSKRTLRTLSDNTVSVMKK*KIRAS 78
           LL   PI + PP+   S RTLR L  + +  +++ ++  S
Sbjct: 320 LLSCTPIFRSPPNPPWSNRTLRNLKKDRMKYLRRYRLNRS 359


>AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP24 protein.
          Length = 176

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 494 PH*SGGRNITHMKLLAREFI 553
           PH  GGRN  + KL +  F+
Sbjct: 19  PHTEGGRNADNFKLYSSLFV 38


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,976
Number of Sequences: 2352
Number of extensions: 13294
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)