Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0214
         (657 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53180-8|AAA96290.1|  452|Caenorhabditis elegans Sulfatase domai...    37   0.014
U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domai...    31   0.72 
Z73973-5|CAA98267.2|  882|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z82078-9|CAE11308.1|  949|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z82078-8|CAB04948.2|  947|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AL023844-13|CAE11312.1|  949|Caenorhabditis elegans Hypothetical...    29   3.8  
AL023844-12|CAA19535.2|  947|Caenorhabditis elegans Hypothetical...    29   3.8  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    24   4.4  
Z49128-3|CAA88958.2|  855|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z92782-10|CAE17812.1|  377|Caenorhabditis elegans Hypothetical p...    28   6.7  
AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical ...    28   6.7  

>U53180-8|AAA96290.1|  452|Caenorhabditis elegans Sulfatase domain
           protein protein 2 protein.
          Length = 452

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
 Frame = +3

Query: 249 QCFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHHXNSFD------NVTSLPNLLRQNG 410
           Q +++ S CSPSRA  +TG    + G+ G   G      +D      + T++  +L++ G
Sbjct: 73  QAYSADSMCSPSRAGFITGRLPIRLGIVG---GRRVFVPYDIGGLPKSETTMAEMLQEAG 129

Query: 411 IMTGIIGKKHVG 446
             TG++GK H+G
Sbjct: 130 YATGMVGKWHLG 141


>U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domain
           protein protein3, isoform a protein.
          Length = 488

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +1

Query: 136 NVLLLLADDGGFEIGAYRNKICQTPNIDELA--RNGLLFNNA 255
           NVL ++ADD GF    +++    TPN+  LA  +N  L +N+
Sbjct: 32  NVLFIMADDLGFSDVDWKDSTLHTPNLRHLAFHKNTALLSNS 73


>Z73973-5|CAA98267.2|  882|Caenorhabditis elegans Hypothetical
           protein F25D1.4 protein.
          Length = 882

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +1

Query: 79  LALIFYF--FITETVLSDKVRNVLLLLADDGGFEIGAY 186
           L + FYF  F  ET+L ++  N+ LLLA+ GG  IG Y
Sbjct: 816 LHIKFYFAHFKQETILQERSYNLFLLLAEIGG-TIGLY 852


>Z82078-9|CAE11308.1|  949|Caenorhabditis elegans Hypothetical
           protein Y48A6B.11b protein.
          Length = 949

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/62 (25%), Positives = 26/62 (41%)
 Frame = +1

Query: 454 ACISLIMSRRRRTTTLIRWSQHHPHEAARPGVHRECKQGKQALLLVRGLP*PAPLRTQRP 633
           +C+S  M         +  S H PHEA +  +    +Q +    + R    P P+ T +P
Sbjct: 153 SCLSRKMEENFSRMQELMISGHSPHEARQQTIQESSEQLEPRAKVTRSSSQPPPIDTLKP 212

Query: 634 AV 639
            V
Sbjct: 213 RV 214


>Z82078-8|CAB04948.2|  947|Caenorhabditis elegans Hypothetical
           protein Y48A6B.11a protein.
          Length = 947

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/62 (25%), Positives = 26/62 (41%)
 Frame = +1

Query: 454 ACISLIMSRRRRTTTLIRWSQHHPHEAARPGVHRECKQGKQALLLVRGLP*PAPLRTQRP 633
           +C+S  M         +  S H PHEA +  +    +Q +    + R    P P+ T +P
Sbjct: 151 SCLSRKMEENFSRMQELMISGHSPHEARQQTIQESSEQLEPRAKVTRSSSQPPPIDTLKP 210

Query: 634 AV 639
            V
Sbjct: 211 RV 212


>AL023844-13|CAE11312.1|  949|Caenorhabditis elegans Hypothetical
           protein Y48A6B.11b protein.
          Length = 949

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/62 (25%), Positives = 26/62 (41%)
 Frame = +1

Query: 454 ACISLIMSRRRRTTTLIRWSQHHPHEAARPGVHRECKQGKQALLLVRGLP*PAPLRTQRP 633
           +C+S  M         +  S H PHEA +  +    +Q +    + R    P P+ T +P
Sbjct: 153 SCLSRKMEENFSRMQELMISGHSPHEARQQTIQESSEQLEPRAKVTRSSSQPPPIDTLKP 212

Query: 634 AV 639
            V
Sbjct: 213 RV 214


>AL023844-12|CAA19535.2|  947|Caenorhabditis elegans Hypothetical
           protein Y48A6B.11a protein.
          Length = 947

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/62 (25%), Positives = 26/62 (41%)
 Frame = +1

Query: 454 ACISLIMSRRRRTTTLIRWSQHHPHEAARPGVHRECKQGKQALLLVRGLP*PAPLRTQRP 633
           +C+S  M         +  S H PHEA +  +    +Q +    + R    P P+ T +P
Sbjct: 151 SCLSRKMEENFSRMQELMISGHSPHEARQQTIQESSEQLEPRAKVTRSSSQPPPIDTLKP 210

Query: 634 AV 639
            V
Sbjct: 211 RV 212


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 23.8 bits (49), Expect(2) = 4.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 321 NGMYGLHHGVHH 356
           +G +G HHG HH
Sbjct: 670 HGGHGTHHGAHH 681



 Score = 23.0 bits (47), Expect(2) = 4.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 330 YGLHHGVHHXNSFD 371
           +G HHG HH +  D
Sbjct: 695 HGAHHGAHHGHHDD 708


>Z49128-3|CAA88958.2|  855|Caenorhabditis elegans Hypothetical
           protein M03C11.3 protein.
          Length = 855

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
 Frame = +3

Query: 180 RVSQQNMSNAEYR*ISAKRPVVQQCFTSVSSCSPSRAALLTGSPSHQNGMY------GLH 341
           R S+Q  SN  +   +A++    Q    V+     RA ++ G PS+ N          LH
Sbjct: 152 RDSEQPSSNGSHGGTTARKKPYPQPTIRVAQ----RAPIIMGPPSNTNTQVLLSPAGNLH 207

Query: 342 HGVHHXNSFDNVTSLPNLLRQN 407
           +G    +S D+  S P+L+ +N
Sbjct: 208 NGYQRMSSGDSAPSSPSLMGRN 229


>Z92782-10|CAE17812.1|  377|Caenorhabditis elegans Hypothetical
           protein F14F8.10 protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 448 GPTCFLPIIPVIIPFWRSKFGRLVTLSKEXKWWTP 344
           G T  L + P I+PFW   + +   + K  KW  P
Sbjct: 171 GKTIVLVLAPTILPFWYLDYAQ-TKIRKNFKWVPP 204


>AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical
           protein F40E12.2 protein.
          Length = 1251

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 603 WK-ATYKKKGLFSLFALAMNSRASSFMWVMLRPPD 502
           WK A Y   G+ +L  + + +   ++ W+++R PD
Sbjct: 733 WKLAVYIGAGVLALVLIGVGAAVFAYWWILIRDPD 767


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,882,541
Number of Sequences: 27780
Number of extensions: 298617
Number of successful extensions: 770
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)