Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0213
(667 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20483| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 4e-22
SB_10800| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_38003| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_22293| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_34167| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00013) 31 0.84
SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05) 31 0.84
SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4) 30 1.5
SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2) 30 1.5
SB_36447| Best HMM Match : Trp_repressor (HMM E-Value=2.5) 29 2.6
SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.4
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 29 3.4
SB_36001| Best HMM Match : CheD (HMM E-Value=3.9) 29 4.5
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 29 4.5
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_28984| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_1025| Best HMM Match : Antistasin (HMM E-Value=3.5) 28 5.9
SB_19802| Best HMM Match : fn3 (HMM E-Value=0) 28 7.9
SB_16519| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_31736| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0) 28 7.9
>SB_20483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 101 bits (243), Expect = 4e-22
Identities = 46/84 (54%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 EEVRGPIEL-TTEKSENLPEDGGNEEGSTYHMEKLRRYQLNRLKYFYAVVECDTVTTADK 182
EE GP EL + +++ ED N+EGS + EKLR+YQLN+LKY+YAVVECD+ TA+
Sbjct: 10 EEALGPTELCASNQAKEDHEDVSNQEGSEFSREKLRQYQLNKLKYYYAVVECDSAETANF 69
Query: 183 LYNECDGMEYESSATRLDMRFIPD 254
+Y ECDG+E+E + LD+RFIPD
Sbjct: 70 IYEECDGVEFEMTGNLLDLRFIPD 93
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 263 FDHEPREVCSKLPDLRKYKP 322
F+HEP +++PDL YKP
Sbjct: 97 FEHEPTSSATEMPDLNTYKP 116
>SB_10800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 943
Score = 32.7 bits (71), Expect = 0.28
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 305 LRKYKPRLFTTTALQQAKVELTWDATNPNRTEIIKNALDGKIEDLDLKEYLASSSDESED 484
LRK +L A Q K E+ WD T + I N L K ++LDL E S + S+D
Sbjct: 869 LRKGAVKL-EVPASQAEKEEMYWDDTGLSGVRITVNPLQ-KFQELDLNEDNDSDNGHSDD 926
Query: 485 EN 490
E+
Sbjct: 927 ED 928
>SB_38003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -3
Query: 131 QSIQLVTS-QFFH-VVC*SLFISTIFREIFRFFCCQFNGASYFFF 3
QSI +T Q FH V C S+ T F ++F CQ NG+ FF+
Sbjct: 80 QSIGSLTFYQVFHRVTCQSIGSLTFFYQVFHRITCQSNGSLTFFY 124
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -3
Query: 212 VFHPVTFIIQLISGSHCITFHHCIEVFQSIQLVTS--QFFH-VVC*SLFISTIFREIFRF 42
VFH VT Q I H + QSI +T Q FH + C S T F ++F
Sbjct: 73 VFHRVT--CQSIGSLTFYQVFHRVTC-QSIGSLTFFYQVFHRITCQSNGSLTFFYQVFHR 129
Query: 41 FCCQFNGASYFFF 3
CQ NG+ FF+
Sbjct: 130 VTCQSNGSLTFFY 142
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -3
Query: 212 VFHPVTFIIQLISGSHCITFHHCIE--VFQSIQLVTS-QFFH-VVC*SLFISTIFREIFR 45
VFH +T + +TF+ QSI +T Q FH + C S T F +F
Sbjct: 266 VFHRIT-----CQSNGSLTFYQVFHRVTCQSIGSLTFYQVFHRITCQSSGSLTFFYHVFH 320
Query: 44 FFCCQFNGASYFFF 3
CQ NG+ FF+
Sbjct: 321 RVTCQSNGSLTFFY 334
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 104 FFHVVC*SLFISTIFREIFRFFCCQFNGASYFFF 3
F V C S T F ++F CQ NG+ FF+
Sbjct: 2 FHRVTCQSNGSLTFFYQVFHRITCQSNGSLTFFY 35
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 107 QFFH-VVC*SLFISTIFREIFRFFCCQFNGASYFFF 3
Q FH + C S+ T F ++F CQ G+ FF+
Sbjct: 143 QVFHRITCQSIGSLTFFYQVFHRVTCQSKGSLTFFY 178
>SB_22293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1239
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -3
Query: 131 QSIQLVTS-QFFH-VVC*SLFISTIFREIFRFFCCQFNGASYFFF 3
QSI +T Q FH + C S+ T F ++F CQ NG+ FF+
Sbjct: 623 QSIGSLTFYQVFHRITCQSIGSLTFFYQVFHRITCQSNGSLTFFY 667
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 107 QFFH-VVC*SLFISTIFREIFRFFCCQFNGASYFFF 3
Q FH + C S+ T F ++F CQ NG+ FF+
Sbjct: 436 QVFHRITCQSICSLTFFYQVFHRVTCQSNGSLTFFY 471
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 107 QFFH-VVC*SLFISTIFREIFRFFCCQFNGASYFFF 3
Q FH V C S+ T F ++F CQ NG+ FF+
Sbjct: 704 QVFHRVTCQSIGSLTFFYQVFHRVTCQSNGSLTFFY 739
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -3
Query: 212 VFHPVTFIIQLISGSHCITFHHCIEVFQSIQLVTS--QFFH-VVC*SLFISTIFREIFRF 42
VFH VT Q I H I QSI +T Q FH + C S T F ++F
Sbjct: 616 VFHRVT--CQSIGSLTFYQVFHRITC-QSIGSLTFFYQVFHRITCQSNGSLTFFYQVFHR 672
Query: 41 FCCQFNGASYFFF 3
CQ NG+ FF+
Sbjct: 673 VTCQSNGSLTFFY 685
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 128 SIQLVTSQFFHVVC*SLFISTIFREIFRFFCCQFNGASYFFF 3
S+ L F V C S T F ++F CQ NG+ FF+
Sbjct: 573 SLTLFYRVFHRVTCQSNGSLTFFYQVFHRITCQSNGSLTFFY 614
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 107 QFFH-VVC*SLFISTIFREIFRFFCCQFNGASYFFF 3
Q FH + C S T F ++F CQ NG+ FF+
Sbjct: 507 QVFHRITCQSSGSLTFFYQVFHRVTCQSNGSLTFFY 542
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 107 QFFH-VVC*SLFISTIFREIFRFFCCQFNGASYFFF 3
Q FH + C S T+F +F CQ NG+ FF+
Sbjct: 561 QVFHRITCQSNGSLTLFYRVFHRVTCQSNGSLTFFY 596
>SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 482 DENQPKKIEAIFNQTTTMKIRYKN-TNYYLMKLIKKRKEENKDMKWKLR 625
D++ PK +E FNQ T + +NY M+L++ + E + KWKLR
Sbjct: 274 DKDGPKNMERTFNQITRLLYSVDQISNYARMRLMQLK--ELRAAKWKLR 320
>SB_34167| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00013)
Length = 477
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 437 LDLKEYLASSSDESED---ENQPKKIEAIFNQTTTMKIRY-KNTNYYLMKLIKKRKEENK 604
L++K + +D +ED E + KI++++N+ I Y KN +L K+ +E K
Sbjct: 296 LEVKNRFQALADNAEDTPVETRWNKIKSVYNEAAVNTIGYKKNIKQWLSPETWKKIDERK 355
Query: 605 DMKWKL 622
++K ++
Sbjct: 356 ELKLRM 361
>SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05)
Length = 666
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = +2
Query: 437 LDLKEYLASSSDESED---ENQPKKIEAIFNQTTTMKIRY--KNTNYYLMKLIKKRKEEN 601
L++K + +D +ED E + KI++++N+ I Y KN+ +L K+ +E
Sbjct: 266 LEVKNRFQALADNAEDTPVETRWNKIKSVYNEAAVNTIGYKKKNSKQWLSPETWKKIDER 325
Query: 602 KDMKWKL 622
K++K ++
Sbjct: 326 KELKLRM 332
>SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 834
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = -2
Query: 312 LRRSGNLLHTSRGS*SKVTYQV*TSYRGELHYFRIPSRHIHYTTYQR*SLYHIPPLHRSI 133
L +S +L +S S Y+ Y+ Y + S + + Y+ SLY PPL++S
Sbjct: 263 LYKSSSLYKSSSLYKSSSLYESPPLYKSSSLY-KSSSLYKSSSLYKSSSLYESPPLYKSS 321
Query: 132 SIY-SAGNVAVFPCGMLIPL 76
+Y S+ + P +LIPL
Sbjct: 322 PLYKSSPPTSTHPSTVLIPL 341
>SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4)
Length = 639
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 467 SDESEDENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKKRKEE-NKDMKWKLRGD*DKE 643
S+ SED N + + F+ T ++ + Y +L ++ KE+ NKD++ +++ D+E
Sbjct: 261 SEISEDFNMSAEEQMYFHPRTVPRVSNREVERYCRELEERVKEQFNKDLEVRMKEQVDRE 320
>SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2)
Length = 2658
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 467 SDESEDENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKKRKEE-NKDMKWKLRGD*DKE 643
S+ SED N + + F+ T ++ + Y +L ++ KE+ NKD++ +++ D+E
Sbjct: 2273 SEISEDFNMSTEEQMYFHPRTVPRVSNREVERYCRELEERVKEQFNKDLEVRMKEQVDRE 2332
>SB_36447| Best HMM Match : Trp_repressor (HMM E-Value=2.5)
Length = 228
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 500 KIEAIFNQTTTMKIRYKNTNYYLMK 574
++EA+ NQT TM +R +N+ Y+ K
Sbjct: 46 QVEALTNQTDTMALRVENSQIYIRK 70
>SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1202
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -3
Query: 290 CIPHGVHDRKLHIRYEPHIEASCTTF--VFHPVTFIIQLISGSHCITFHHC 144
C P+ + DR H+ + H +A+CT F+ + G C+ + C
Sbjct: 241 CFPNAISDRYKHLAHNCHSDANCTNTKGSFYCTCHVGYSGDGVTCVDINEC 291
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 237 YRGELHYFRIPSRHIHYTTYQR*SLYHIP 151
+R L Y PSRH+HY + R S++H P
Sbjct: 372 HRPRLSYHHRPSRHLHYHRF-RLSIHHHP 399
>SB_36001| Best HMM Match : CheD (HMM E-Value=3.9)
Length = 313
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 443 LKEYLASSSDESEDEN-QPKKIEAIFNQTTTMKIRYKNTN 559
LKEY + + ESEDEN QP+ N ++ ++ N
Sbjct: 262 LKEYFSETDTESEDENRQPRTDSLSVNDINDRQVETRSEN 301
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +2
Query: 389 NRTEIIKNALDGKIEDLDLKEYLASSSDESEDENQPKKIEAIFNQTTTMKIRYKNTNYYL 568
++ + +K L KI +L +K + E K I+ FN MK+R ++Y+
Sbjct: 904 SKAKELKAQLKIKIAELKVKAEELKQKAKDMVEKTKKSIKKGFNDFKQMKLREIVEHHYV 963
Query: 569 MKLIKKRKEENKDMK 613
K I+ K ++ +K
Sbjct: 964 FKTIEFTKNTSEKIK 978
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +2
Query: 473 ESEDENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKKRKEENKDMKWKLRGD*DKEKRR 652
E E+E +PK + +T+ + + T +K KK K++ K+ + G+ KEK++
Sbjct: 481 EEEEEKEPKSEKKKRKRTSDNESEKEETTPSKLKKSKKDKKKAKEATEEDDGEEKKEKKK 540
Query: 653 TGQK 664
+K
Sbjct: 541 KKKK 544
>SB_28984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +2
Query: 371 WDAT---NPNRTEIIKNALDGKIEDLDLKEYLASSSDESEDENQPKKIEAIFNQTTTMKI 541
WD+ + T+ I +A + +++D++ + + + D+S N PK F K
Sbjct: 19 WDSQENIDAQATQNIISAFEMRLKDIETQTFYGTIHDDSNRRNNPKNKLRTFR---LFKS 75
Query: 542 RYKNTNYYL-MKLIK 583
YK +Y L K+IK
Sbjct: 76 NYKLEDYLLECKIIK 90
>SB_1025| Best HMM Match : Antistasin (HMM E-Value=3.5)
Length = 136
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 473 ESEDENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKKRKEENKDMKWKLRGD*DKEKRR 652
E + E + KKIE + + K R + + + + I K+K E D + G ++E+
Sbjct: 59 EQKAEAESKKIEQLRRELLEEKAREEMQRHAVQQGISKKKSERLDWMYSAPGQINREEYL 118
Query: 653 TGQ 661
G+
Sbjct: 119 LGK 121
>SB_19802| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1075
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 299 PDLRKYKPRLFTTTALQQAKVELTWDATN-PN 391
P+ + PR FT A+ + + LTW A PN
Sbjct: 673 PEAQPSSPRNFTALAINSSTIRLTWSAPEYPN 704
>SB_16519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 27.9 bits (59), Expect = 7.9
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
Frame = +3
Query: 27 ELTTEKSENLPE-DGGNEEGSTYHMEKLRRYQLNRLKYFYAVVECDTVTTADKLY--NEC 197
++ E+ ENL +G N H+++ R + + C V + +Y N C
Sbjct: 97 QILKEQMENLSAMEGVNAAAERRHIDREARITQTYMTVLIVFLAC-YVPSCIMIYLMNMC 155
Query: 198 DGMEYESSATRLDMRFIPDM*LSIMNPVRYAVSCPTSASTSLVCSQLQRC 347
E D+++I + S++NP+ YA+ P L ++ C
Sbjct: 156 STCSCELIHWFRDLQYILVVVNSLINPLVYAIRMPNFRRAILAMLKVSMC 205
>SB_31736| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 114 NVAVFPCGMLIPLHFHHL 61
N+ PC M +P H HH+
Sbjct: 635 NICWMPCAMAVPYHVHHV 652
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +2
Query: 461 SSSDESEDENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKKRKEENKDMKWKLRGD*DK 640
S S SE + K I T +K ++TN K KK+K++ KD K D K
Sbjct: 171 SESLGSESLAEKKCARKINITPTCLKFSSQSTNTTGNKQHKKKKDKGKDESSKPLKDSKK 230
Query: 641 EKRRT 655
EK+++
Sbjct: 231 EKKKS 235
>SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1705
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -3
Query: 290 CIPHGVHDRKLHIRYEPHIEASCTTF--VFHPVTFIIQLISGSHCITFHHC 144
C P+ + +R H+ ++ H +A+CT FH G C+ + C
Sbjct: 1179 CFPNAISNRYKHLAHKCHSDANCTNTKGSFHCTCHTGYSGDGVICVDINEC 1229
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,645,331
Number of Sequences: 59808
Number of extensions: 379813
Number of successful extensions: 1440
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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