Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0213
         (667 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    30   0.057
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    29   0.13 
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    27   0.40 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   1.6  
AJ000038-1|CAA03874.1|   73|Anopheles gambiae F1 protein protein.      25   2.1  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   2.8  
Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.       23   8.7  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 30.3 bits (65), Expect = 0.057
 Identities = 23/70 (32%), Positives = 35/70 (50%)
 Frame = +3

Query: 96  MEKLRRYQLNRLKYFYAVVECDTVTTADKLYNECDGMEYESSATRLDMRFIPDM*LSIMN 275
           M+ LRRY+LNR  + + + +     +A +LYN      +E+ ++RL  RF  D   S   
Sbjct: 348 MKYLRRYRLNRSAFNFRLFK--YAASAHRLYNRA---RFEAYSSRLQSRFRSDP-ASFWQ 401

Query: 276 PVRYAVSCPT 305
            VR    C T
Sbjct: 402 FVRIRRGCNT 411


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 29.1 bits (62), Expect = 0.13
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 560 YYLMKLIKKRKEENKDMKWKLRGD*DKEKRR 652
           YYL+ L    +E N+D+K +LR +  +E+R+
Sbjct: 677 YYLISLTGSLREANQDLKLQLRKERTEERRK 707


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 27.5 bits (58), Expect = 0.40
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 54  LPEDGGNEEGSTYHMEKLRRYQLNRLKYFYAVVE 155
           + ++G NE     H++ ++R  L   KYFY  ++
Sbjct: 610 MQKEGENELTVLTHLDSMKRVSLRFQKYFYGAID 643


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +3

Query: 24   IELTTEKSENLPEDGGNEEGSTYHMEKLRRYQLNRLKYFYAVVE 155
            ++L   K   +PE+   E    Y  E+L  Y+L  L+Y  +++E
Sbjct: 1033 LQLKPLKLHEIPEEPPQEPLKEYTEEELDSYKLPDLQYQISILE 1076


>AJ000038-1|CAA03874.1|   73|Anopheles gambiae F1 protein protein.
          Length = 73

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = +2

Query: 431 EDLD---LKEYLASSSDESEDENQPKKIE 508
           ED D   LK + +SSSD+ E+E  P  +E
Sbjct: 36  EDFDEESLKPHSSSSSDDGEEEFDPSLLE 64


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 275 PREVCSKLPDLRKYKPR 325
           PR+ C   P L KYKPR
Sbjct: 483 PRDRCQSEPVLFKYKPR 499


>Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.
          Length = 101

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = +2

Query: 431 EDLD---LKEYLASSSDESEDENQPKKIE 508
           ED D   LK + +S SD+ E+E  P  +E
Sbjct: 36  EDFDEESLKPHSSSPSDDGEEEFDPSLLE 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,607
Number of Sequences: 2352
Number of extensions: 12980
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)