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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0213
         (667 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73427-4|CAA97802.3|  601|Caenorhabditis elegans Hypothetical pr...    70   1e-12
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr...    33   0.18 
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr...    33   0.18 
AF016657-12|AAB93656.1|  278|Caenorhabditis elegans Hypothetical...    33   0.18 
Z93383-14|CAB07631.2|  279|Caenorhabditis elegans Hypothetical p...    32   0.32 
U40933-2|AAL27242.1|  158|Caenorhabditis elegans Hypothetical pr...    31   0.73 
Z71262-4|CAA95814.1|  775|Caenorhabditis elegans Hypothetical pr...    31   0.97 
AF068718-7|AAM45356.1|  274|Caenorhabditis elegans Hypothetical ...    29   3.9  
AC006708-24|AAF60413.1|  660|Caenorhabditis elegans Hypothetical...    29   3.9  
U56966-10|AAA98722.1|  686|Caenorhabditis elegans Amyloid precur...    28   5.2  
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p...    28   5.2  
U00240-1|AAC46470.1|  680|Caenorhabditis elegans beta-amyloid pr...    28   5.2  
AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical ...    28   5.2  
Z68222-7|CAA92504.2|  568|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ...    28   6.8  
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical...    28   6.8  
AF016673-4|AAB66125.2|  743|Caenorhabditis elegans Hypothetical ...    28   6.8  
AC024749-2|AAF60435.2|  444|Caenorhabditis elegans Hypothetical ...    28   6.8  
Z79601-5|CAB01882.1|  450|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z68303-7|CAA92642.2|  445|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z36752-7|CAA85329.1|  468|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AF435979-1|AAM46663.1|  445|Caenorhabditis elegans equilibrative...    27   9.1  
AF016657-4|AAB93651.2|  296|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z73427-4|CAA97802.3|  601|Caenorhabditis elegans Hypothetical
           protein F58B3.4 protein.
          Length = 601

 Score = 70.1 bits (164), Expect = 1e-12
 Identities = 32/84 (38%), Positives = 52/84 (61%)
 Frame = +3

Query: 3   EEEVRGPIELTTEKSENLPEDGGNEEGSTYHMEKLRRYQLNRLKYFYAVVECDTVTTADK 182
           +EE  GP+    +  E   ED  ++E  T     +R Y +N+LKY+Y+V+  D++ +A  
Sbjct: 254 KEEKTGPLLKLAKPVEEYKEDEMDDETRT----AVREYLVNKLKYYYSVITFDSIPSAVA 309

Query: 183 LYNECDGMEYESSATRLDMRFIPD 254
           +Y ECDG ++E +  ++DMRFIPD
Sbjct: 310 VYEECDGFQFEETGLKMDMRFIPD 333



 Score = 35.5 bits (78), Expect = 0.034
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = +2

Query: 302 DLRKYKPRLFTTTALQQAKVELTWDATNPNRTEIIKNALDGKIEDLDLKEYLASSSDESE 481
           +L KYK +  + +A+     ++ WD  +P R +    A +G   D D  + L   SDES+
Sbjct: 352 NLTKYKAKKKSKSAIISTGAKILWDEDDPQRKKKFLEAFNG---DEDAGKDLIVDSDESD 408

Query: 482 -DENQPKKIEAIFN 520
            DE   K + A+ N
Sbjct: 409 GDEANRKTLMALLN 422



 Score = 29.9 bits (64), Expect = 1.7
 Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
 Frame = +2

Query: 347 QQAKVELTWDATNPNRTEIIKNA---LDGKIEDLDLKEYLASSSDESEDENQPKKIEAIF 517
           +++K+++ W+    N ++        +D   E++ +K+     SD+ EDE +  + +   
Sbjct: 426 RKSKLDVDWEGEEKNGSDSSDGEYVKVDDDDEEIGVKQKKKKGSDDDEDEKEEVEEKKED 485

Query: 518 NQTTTMKIRYKNTNYYLMKLIKKRKEENKDMKWKLR 625
            + T  K   K     LM+   KRK  +K+ +  ++
Sbjct: 486 VKLTGYKAYKKKQKQKLMENKLKRKGTSKEAETNIK 521


>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
            R07G3.3a protein.
          Length = 1982

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
 Frame = +2

Query: 302  DLRKYKPRLFTTTALQQAKVELTWDATNPNRTEIIK-------NALDGKIE-DLD-LKEY 454
            DL   + RL  +   Q+ K+  +    N  + EI +       NA     +  LD LK  
Sbjct: 1245 DLENQRSRLSASNEEQKLKIASSDQEANQRKREIEQLKQRVQTNARGAASQPQLDQLKAQ 1304

Query: 455  LASSSDESEDEN-QPKKIEAIFNQTTTMKIRYKNTNYYLMKL 577
            LA++  ES     + K  E  FNQT  + I+Y+N N  L KL
Sbjct: 1305 LATARQESAAATAKAKAAEDKFNQTRQLAIKYRNENTELKKL 1346


>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
            R07G3.3b protein.
          Length = 1987

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
 Frame = +2

Query: 302  DLRKYKPRLFTTTALQQAKVELTWDATNPNRTEIIK-------NALDGKIE-DLD-LKEY 454
            DL   + RL  +   Q+ K+  +    N  + EI +       NA     +  LD LK  
Sbjct: 1245 DLENQRSRLSASNEEQKLKIASSDQEANQRKREIEQLKQRVQTNARGAASQPQLDQLKAQ 1304

Query: 455  LASSSDESEDEN-QPKKIEAIFNQTTTMKIRYKNTNYYLMKL 577
            LA++  ES     + K  E  FNQT  + I+Y+N N  L KL
Sbjct: 1305 LATARQESAAATAKAKAAEDKFNQTRQLAIKYRNENTELKKL 1346


>AF016657-12|AAB93656.1|  278|Caenorhabditis elegans Hypothetical
           protein C16C4.11 protein.
          Length = 278

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = +2

Query: 431 EDLDLKEYLASSSDESEDENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKKRKEENKDM 610
           ++  + E + + S   E+E     IE  FN    M+I  KN  Y+   L +  KEE ++M
Sbjct: 12  KEFKISEVIKNISRFEENEKYSTNIEERFNIPWRMEI-VKNNGYFEFYL-RCEKEERENM 69

Query: 611 KWKLRGD 631
           KW +  D
Sbjct: 70  KWLIHVD 76


>Z93383-14|CAB07631.2|  279|Caenorhabditis elegans Hypothetical
           protein F54B8.12 protein.
          Length = 279

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
 Frame = -1

Query: 493 LILIFAFITTRS*ILFEVKVFYFPVECVFNYFSAVRIGGVP------CKL--DLSLLQRC 338
           + +I AFI   S ILF   VFYF +  +++   + RIG  P      C++  D+      
Sbjct: 1   MFIIIAFIIALS-ILFSQFVFYFNLYLLYSILYSKRIGFKPELLIIYCRIAADICYSFCV 59

Query: 337 SCEQTRLVLAEVGQ--LTAYLTGFMIESYISGMNLISRRVALL 215
           SC +T  ++++  +  +   L+ F++E  I+ M +I   +A L
Sbjct: 60  SCMKTNFLVSQFSKKLIVKNLSFFLLEGSIT-MGIIRATIAFL 101


>U40933-2|AAL27242.1|  158|Caenorhabditis elegans Hypothetical
           protein F20D12.7 protein.
          Length = 158

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
 Frame = +2

Query: 398 EIIKNALDGKIEDLDLKEYLASSSDESEDENQPKKIEAIF--------NQTTTMKIRYKN 553
           ++IK A+D K  D  +K      SDE E+  +P  +  +         N   TMK+ YK 
Sbjct: 60  DVIKAAVDQKFRDAGIKVNSTDGSDEEEEITEPSSVLLVMITMGGRMANVVGTMKL-YKG 118

Query: 554 TNYYLMKLIKKRKE 595
              YL    +KRK+
Sbjct: 119 LGKYLSD--RKRKK 130


>Z71262-4|CAA95814.1|  775|Caenorhabditis elegans Hypothetical
           protein F22D6.5 protein.
          Length = 775

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +2

Query: 584 KRKEENKDMKWKLRGD*DKEKRR 652
           KRK+E+KD++W L  D D E+++
Sbjct: 213 KRKDESKDVEWNLDSDSDDEQKK 235


>AF068718-7|AAM45356.1|  274|Caenorhabditis elegans Hypothetical
           protein R01B10.6 protein.
          Length = 274

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
 Frame = +2

Query: 233 RYEVHT*YVTFDHEPREVCS-KLPDLRKYKPRLFTTTALQQAKVELTW-DATNPNRTEII 406
           +Y+++  + T DH+   VCS     L   K  LF+        V L + D  N N+  + 
Sbjct: 41  QYQLNIVFQTCDHDLHSVCSFPAATLEYEKNSLFSPNVAYYLNVRLKFADVINTNKLGLF 100

Query: 407 KNALDGKIEDLD-LKEYLASS 466
           +N +    E+   LK+Y  S+
Sbjct: 101 QNVITITDENQKILKQYTKSA 121


>AC006708-24|AAF60413.1|  660|Caenorhabditis elegans Hypothetical
           protein Y110A7A.19 protein.
          Length = 660

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 4/106 (3%)
 Frame = +2

Query: 317 KPRLFTTTALQQAKVELTWDATNPNRTEIIKNALDGKIEDLDLKEYLASSSDESED---- 484
           KP   T        + + + A N N  E + +  + K  ++ +  +   S   +      
Sbjct: 370 KPITSTCNLFFVEAMGIHYRAANENLAENLVSIYESKANEVKMPAFTIESMFYNRQLQLA 429

Query: 485 ENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKKRKEENKDMKWKL 622
             Q   +  I++  TTM  R    N YL  L+ ++   + D  W L
Sbjct: 430 VEQSASLNRIYDLYTTMVPRLVGVNNYLSSLVFRKLAASSDRHWPL 475


>U56966-10|AAA98722.1|  686|Caenorhabditis elegans Amyloid
           precursor-like protein1, isoform a protein.
          Length = 686

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 21/76 (27%), Positives = 35/76 (46%)
 Frame = +2

Query: 263 FDHEPREVCSKLPDLRKYKPRLFTTTALQQAKVELTWDATNPNRTEIIKNALDGKIEDLD 442
           ++ E  E   K PD++K K ++      ++ KV +  +   P   E      D + +D D
Sbjct: 510 YEDEDDEQVKKTPDMKK-KVKVVDIKP-KEIKVTIEEEKKAPKLVETSVQT-DDEDDDED 566

Query: 443 LKEYLASSSDESEDEN 490
                +S SDE ED+N
Sbjct: 567 SSSSTSSESDEDEDKN 582


>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
            protein C28H8.3 protein.
          Length = 1714

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 23/107 (21%), Positives = 48/107 (44%)
 Frame = +2

Query: 347  QQAKVELTWDATNPNRTEIIKNALDGKIEDLDLKEYLASSSDESEDENQPKKIEAIFNQT 526
            +    +L++ A   N+ +I  + +   ++DL  K  L +     +     K    + N+ 
Sbjct: 1108 EPVNTQLSYRARPFNKEKIANDYIVTLVDDLKEKGELPAICFNDDRHVCEKLAVTLANEL 1167

Query: 527  TTMKIRYKNTNYYLMKLIKKRKEENKDMKWKLRGD*DKEKRRTGQKN 667
               ++ Y  T+ +  K + K  +E+K +K   R   D EK++ G K+
Sbjct: 1168 ERRELEYMETDEFKNKYMIK--DESKLVKLAKRKRDDAEKKKKGDKD 1212


>U00240-1|AAC46470.1|  680|Caenorhabditis elegans beta-amyloid
           protein precursor protein.
          Length = 680

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 21/76 (27%), Positives = 35/76 (46%)
 Frame = +2

Query: 263 FDHEPREVCSKLPDLRKYKPRLFTTTALQQAKVELTWDATNPNRTEIIKNALDGKIEDLD 442
           ++ E  E   K PD++K K ++      ++ KV +  +   P   E      D + +D D
Sbjct: 504 YEDEDDEQVKKTPDMKK-KVKVVDIKP-KEIKVTIEEEKKAPKLVETSVQT-DDEDDDED 560

Query: 443 LKEYLASSSDESEDEN 490
                +S SDE ED+N
Sbjct: 561 SSSSTSSESDEDEDKN 576


>AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical
           protein B0511.6 protein.
          Length = 544

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 10/126 (7%)
 Frame = +2

Query: 257 VTFDHEPREVCSKLPDLRKYKPRLFTTTALQQAKVELTWDATNPNRTEIIKNALDGKIED 436
           + F+ E ++V   LP  R+      T +      V+L   + NP R  + + A +  +E 
Sbjct: 230 IGFEIEMQQVLRHLPKQRQSMLFSATHSPKVDELVKLALHS-NPVRVSVHEKAEEATVEG 288

Query: 437 LDLKEYLASSSDESE-------DENQPKKIEAIFNQTTTMKIRYKNTNYY---LMKLIKK 586
           L  + Y+ + SD+          +N+ KK+   F+   ++K  ++  NY     M +  K
Sbjct: 289 LQ-QGYIVAPSDKRLLLLFTFLKKNKTKKVMVFFSSCNSVKFHHELLNYIDIPCMSIHGK 347

Query: 587 RKEENK 604
           +K++ +
Sbjct: 348 QKQQKR 353


>Z68222-7|CAA92504.2|  568|Caenorhabditis elegans Hypothetical
           protein ZK1251.8 protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 141 YAVVECDTVTTADKLYNECDGMEYESSATRLDM--RFIPDM 257
           Y V+  +T  T D L+N  D +  + S  RLD+   ++ DM
Sbjct: 508 YTVIIHETTRTIDTLHNLADAIRRDPSIPRLDLDVHYLTDM 548


>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
            protein Y57A10A.1 protein.
          Length = 1342

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = +2

Query: 266  DHEPREVCSKLPDLRKYKPRLFTTTALQQAKVE--LTWDATNPNRTEIIKNALDGKIEDL 439
            D E R   SK   LRK       T      + E  + + +    + ++ +NA +GK    
Sbjct: 859  DKEERASRSKTKMLRKDDENEKKTNGSVDERDEDDIAFRSITERQLKVAENAENGKKASA 918

Query: 440  DLKEYLASSSDESEDENQ 493
              +  ++SSSDES+ E++
Sbjct: 919  TKRRLVSSSSDESDQESR 936


>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
            protein Y57A10A.1 protein.
          Length = 1342

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = +2

Query: 266  DHEPREVCSKLPDLRKYKPRLFTTTALQQAKVE--LTWDATNPNRTEIIKNALDGKIEDL 439
            D E R   SK   LRK       T      + E  + + +    + ++ +NA +GK    
Sbjct: 859  DKEERASRSKTKMLRKDDENEKKTNGSVDERDEDDIAFRSITERQLKVAENAENGKKASA 918

Query: 440  DLKEYLASSSDESEDENQ 493
              +  ++SSSDES+ E++
Sbjct: 919  TKRRLVSSSSDESDQESR 936


>AF016673-4|AAB66125.2|  743|Caenorhabditis elegans Hypothetical
           protein T06D4.3 protein.
          Length = 743

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 16/71 (22%), Positives = 36/71 (50%)
 Frame = +2

Query: 302 DLRKYKPRLFTTTALQQAKVELTWDATNPNRTEIIKNALDGKIEDLDLKEYLASSSDESE 481
           ++ + +  L TT ++++    L+ DA   +  + + +    ++E LD++       D   
Sbjct: 247 EISQMRKPLLTTDSIEKMLFSLS-DANYHDLDDDLVSDYAKEVEKLDVELKKTIFKDNPV 305

Query: 482 DENQPKKIEAI 514
           DENQPK ++ +
Sbjct: 306 DENQPKTLDTL 316


>AC024749-2|AAF60435.2|  444|Caenorhabditis elegans Hypothetical
           protein Y16E11A.1 protein.
          Length = 444

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = +2

Query: 431 EDLDLKEYLASSSDESEDENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKKRKEENKDM 610
           ++  + E + + S   + E     IE  FN    M+I+ KN   Y    +K  KEE ++ 
Sbjct: 6   KEFKISEAVKNVSRFEDGEQYSTDIEERFNIPWRMEIKKKNG--YFEFYLKCEKEECENR 63

Query: 611 KWKL 622
           KW +
Sbjct: 64  KWSI 67


>Z79601-5|CAB01882.1|  450|Caenorhabditis elegans Hypothetical
           protein K09A9.3 protein.
          Length = 450

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = -1

Query: 502 FFGLILIFAFITTRS*ILFEVKVFYFPVECVFNYFSAVRIGGVPCKLDLSLLQRCSCEQT 323
           FF L +I   +   +  +++  +F    E  F Y +AV IG   C   ++LL   +   T
Sbjct: 151 FFTLTIITIIVLNGANGVYQNSIFGLASELPFKYTNAVIIGNNLCGTFVTLLSMSTKAVT 210

Query: 322 RLVL 311
           R +L
Sbjct: 211 RNIL 214


>Z68303-7|CAA92642.2|  445|Caenorhabditis elegans Hypothetical
           protein ZK809.4 protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = -1

Query: 502 FFGLILIFAFITTRS*ILFEVKVFYFPVECVFNYFSAVRIGGVPCKLDLSLLQRCSCEQT 323
           FF L +I   +   +  +++  +F    E  F Y +AV IG   C   ++LL   +   T
Sbjct: 146 FFTLTIITIIVLNGANGVYQNSIFGLASELPFKYTNAVIIGNNLCGTFVTLLSMSTKAVT 205

Query: 322 RLVL 311
           R +L
Sbjct: 206 RNIL 209


>Z36752-7|CAA85329.1|  468|Caenorhabditis elegans Hypothetical
           protein F35H8.7 protein.
          Length = 468

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
 Frame = +2

Query: 410 NALDGKIEDLDL-----KEYLASSSDESEDENQPKKIEAIF--NQTTTMKIRYKNTNYYL 568
           N++   IE LD       EY+A S DE    N  +K+E     NQ+   K R    N   
Sbjct: 2   NSVLSNIEKLDTYILRRNEYVAESKDEPNKLNTSRKLEVTTKKNQSNNKK-RPPPINKAR 60

Query: 569 MKL--IKKRKEENKD 607
             L  I +R EENKD
Sbjct: 61  KSLPSIFRRAEENKD 75


>AF435979-1|AAM46663.1|  445|Caenorhabditis elegans equilibrative
           nucleoside transporter1 protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = -1

Query: 502 FFGLILIFAFITTRS*ILFEVKVFYFPVECVFNYFSAVRIGGVPCKLDLSLLQRCSCEQT 323
           FF L +I   +   +  +++  +F    E  F Y +AV IG   C   ++LL   +   T
Sbjct: 146 FFTLTIITIIVLNGANGVYQNSIFGLASELPFKYTNAVIIGNNLCGTFVTLLSMSTKAVT 205

Query: 322 RLVL 311
           R +L
Sbjct: 206 RNIL 209


>AF016657-4|AAB93651.2|  296|Caenorhabditis elegans Hypothetical
           protein C16C4.5 protein.
          Length = 296

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 17/64 (26%), Positives = 34/64 (53%)
 Frame = +2

Query: 431 EDLDLKEYLASSSDESEDENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKKRKEENKDM 610
           ++  + E + + S   +DE+     E  FN    ++I+ K+ N+ L   +K +KEE ++ 
Sbjct: 6   KEFRINETVKNISRFVDDESYFTDTEERFNIPWRIEIKKKDGNFEL--FLKCQKEECENR 63

Query: 611 KWKL 622
           KW +
Sbjct: 64  KWSI 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,113,274
Number of Sequences: 27780
Number of extensions: 292530
Number of successful extensions: 1293
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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