Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0213
(667 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g01160.1 68416.m00020 expressed protein 55 5e-08
At5g53800.1 68418.m06685 expressed protein 33 0.23
At1g23930.1 68414.m03019 hypothetical protein contains Pfam prof... 32 0.39
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 30 1.6
At3g28770.1 68416.m03591 expressed protein 29 2.8
At5g53020.1 68418.m06585 expressed protein 29 3.7
At4g31590.1 68417.m04487 glycosyl transferase family 2 protein s... 29 3.7
At4g10770.1 68417.m01757 oligopeptide transporter OPT family pro... 28 4.9
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 28 4.9
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 28 6.4
At3g53350.3 68416.m05888 myosin heavy chain-related low similari... 28 6.4
At3g53350.2 68416.m05887 myosin heavy chain-related low similari... 28 6.4
At3g53350.1 68416.m05886 myosin heavy chain-related low similari... 28 6.4
At3g02810.1 68416.m00273 protein kinase family protein contains ... 28 6.4
At1g15520.1 68414.m01867 ABC transporter family protein similar ... 28 6.4
At5g60030.1 68418.m07527 expressed protein 27 8.5
At2g22795.1 68415.m02704 expressed protein 27 8.5
>At3g01160.1 68416.m00020 expressed protein
Length = 380
Score = 54.8 bits (126), Expect = 5e-08
Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Frame = +2
Query: 263 FDHEPREVCSKLPDLRKYKPRLFTTTALQQAKVELTWDATNPNRTEIIKNALD-GKIEDL 439
F H PR++ S+ P Y+ F + ALQ +KV L+WD P+R + + + ++ +L
Sbjct: 3 FKHPPRDIASEAP--AGYEGLDFQSRALQMSKVNLSWDEDEPHRIKTLNQKFNPEQLANL 60
Query: 440 DLKEYLASSSDESEDENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKKRKEENKDMK 613
++KE+LA SDES+ + + + NQ+ K + K + Y + + + +KD++
Sbjct: 61 EMKEFLA--SDESDSDEEDDLGNEVINQS---KKKDKKKDKYRALIEAEDVDSDKDLE 113
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 446 KEYLASSSD-ESEDENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKKRKEENKDMKWKL 622
++Y +SSSD ESE E++ E ++ + + K + +KR+ KD K +
Sbjct: 101 RDYSSSSSDSESESESEYSDSEESESEDERRRRKRKRKEREEEEKERKRRRREKDKKKRN 160
Query: 623 RGD*DKEKRRTGQK 664
+ D D +K+R +K
Sbjct: 161 KSDKDGDKKRKEKK 174
>At1g23930.1 68414.m03019 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 649
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 407 KNALDGKIEDLDLKEYLASSSDESEDENQPKKIEAI-FNQTTTMKIRYKNTNYYLMKLIK 583
+N DG +DL + D+ +D+NQP E + F+ TT K+ T L++ ++
Sbjct: 95 QNMQDGD-DDLQPQNMQDDDDDDDDDDNQPLPPEVMYFDPTTYTKVCKIGTRCQLVQTVE 153
Query: 584 KRKEENKDMKW 616
+ + ++KW
Sbjct: 154 FIETLDAELKW 164
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 29.9 bits (64), Expect = 1.6
Identities = 27/98 (27%), Positives = 44/98 (44%)
Frame = +2
Query: 266 DHEPREVCSKLPDLRKYKPRLFTTTALQQAKVELTWDATNPNRTEIIKNALDGKIEDLDL 445
D E EV K K + +L L+ +VE+ TE K L+GK+ED+ +
Sbjct: 235 DVEALEVEPKPETSEKVETQLEKARELE-TEVEVVKAEETAEATEQAKVELEGKLEDVIV 293
Query: 446 KEYLASSSDESEDENQPKKIEAIFNQTTTMKIRYKNTN 559
+E S S+DE + A+ ++ I+ NT+
Sbjct: 294 EE--KDSEINSKDEKTSESGSALCSEEILSTIQESNTD 329
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 29.1 bits (62), Expect = 2.8
Identities = 28/118 (23%), Positives = 56/118 (47%)
Frame = +2
Query: 302 DLRKYKPRLFTTTALQQAKVELTWDATNPNRTEIIKNALDGKIEDLDLKEYLASSSDESE 481
+L+K + TT + +K++ + N+ + K + D ++ + KEY S E
Sbjct: 970 ELKKQEDNKKETTKSENSKLK---EENKDNKEK--KESEDSASKNREKKEYEEKKSKTKE 1024
Query: 482 DENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKKRKEENKDMKWKLRGD*DKEKRRT 655
+ + KK ++ K K++ + KK KEE++D+K K + + KEK+ +
Sbjct: 1025 EAKKEKK------KSQDKKREEKDSEE---RKSKKEKEESRDLKAKKKEEETKEKKES 1073
>At5g53020.1 68418.m06585 expressed protein
Length = 721
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 479 EDENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKKRKEENKDMKWKLRGD*DKEKRRT 655
+D Q +I A+ + + + + K L+K KK+++E + KWK+ K +RR+
Sbjct: 208 KDLEQKDRILAVMMKKSKLDMTEKQMT--LLKEAKKKQDEEEAKKWKMNPKSRKHERRS 264
>At4g31590.1 68417.m04487 glycosyl transferase family 2 protein
similar to cellulose synthase from Agrobacterium
tumeficiens [gi:710492] and Agrobacterium radiobacter
[gi:710493]; contains Pfam glycosyl transferase, group 2
family protein domain PF00535
Length = 692
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 255 YQV*TSYRGELHYFRIPSRHIHYTTYQR*SLYHI 154
+++ +RG HYF+ PS HI +T + SL+H+
Sbjct: 123 FEIVAYFRG-WHYFQSPSLHIPTSTLEIQSLFHL 155
>At4g10770.1 68417.m01757 oligopeptide transporter OPT family
protein similar to oligopeptide transporter Opt1p
[Candida albicans] GI:2367386; contains Pfam profile
PF03169: OPT oligopeptide transporter protein
Length = 766
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 374 DATNPNRTEIIKNALDGKIEDLDLKEYLASSSDESEDENQPKKIEAIFNQTT 529
D TNP+ ++ + + E DL ++ ++E E+EN P + A+ TT
Sbjct: 16 DLTNPSYASSSSSSSEPRDETEDLLLPISDENEEEEEENSPIRQVALTVPTT 67
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +2
Query: 407 KNALDGKIEDLDLKEYLASSSDESEDENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKK 586
K L+ ++E+L L +E + ++IEA+ + T +K++ ++T K I
Sbjct: 890 KTKLENQVEELTSNLELEKQMRMEIEEAKSQEIEALQSVLTDIKLQLRDTQETKSKEISD 949
Query: 587 RKEENKDMKWKLR 625
+ D+K +LR
Sbjct: 950 LQSVLTDIKLQLR 962
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains
Pfam profile PF00004: ATPase, AAA family
Length = 1122
Score = 27.9 bits (59), Expect = 6.4
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 410 NALDGKIEDLDLKEYLASSSDESEDENQP-------KKIEAIFNQTTTMKIRYKNTNYYL 568
N D K+E LD K + S+S ++ + I+A F + M++ +KN YYL
Sbjct: 254 NNQDSKMEILDEKNEVTSNSQQASTSGNGLQSAIFREAIQAGFVRGENMEVSFKNFPYYL 313
Query: 569 MKLIK 583
+ K
Sbjct: 314 SEYTK 318
>At3g53350.3 68416.m05888 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 27.9 bits (59), Expect = 6.4
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +2
Query: 374 DATNPNRTEIIKNALD-GKIEDLDLKEYLASSSDESEDE--NQPKKIEAIFNQTTTMKIR 544
D+++ E +K A++ + E LK + ++ ++E +I + + QT +K R
Sbjct: 203 DSSSSMEVEELKEAMNLSRQEITQLKSAVEAAETRYQEEYIQSTLQIRSAYEQTEAVKSR 262
Query: 545 YKNTNYYLMKLIKKRKEENKDMKWKLRGD*DKEKRRTG 658
Y L + + + K+E + ++ +L + KE TG
Sbjct: 263 YSQREAELTEELNRTKDEIEGLRKELM-EKVKEDESTG 299
>At3g53350.2 68416.m05887 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 27.9 bits (59), Expect = 6.4
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +2
Query: 374 DATNPNRTEIIKNALD-GKIEDLDLKEYLASSSDESEDE--NQPKKIEAIFNQTTTMKIR 544
D+++ E +K A++ + E LK + ++ ++E +I + + QT +K R
Sbjct: 203 DSSSSMEVEELKEAMNLSRQEITQLKSAVEAAETRYQEEYIQSTLQIRSAYEQTEAVKSR 262
Query: 545 YKNTNYYLMKLIKKRKEENKDMKWKLRGD*DKEKRRTG 658
Y L + + + K+E + ++ +L + KE TG
Sbjct: 263 YSQREAELTEELNRTKDEIEGLRKELM-EKVKEDESTG 299
>At3g53350.1 68416.m05886 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 396
Score = 27.9 bits (59), Expect = 6.4
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +2
Query: 374 DATNPNRTEIIKNALD-GKIEDLDLKEYLASSSDESEDE--NQPKKIEAIFNQTTTMKIR 544
D+++ E +K A++ + E LK + ++ ++E +I + + QT +K R
Sbjct: 205 DSSSSMEVEELKEAMNLSRQEITQLKSAVEAAETRYQEEYIQSTLQIRSAYEQTEAVKSR 264
Query: 545 YKNTNYYLMKLIKKRKEENKDMKWKLRGD*DKEKRRTG 658
Y L + + + K+E + ++ +L + KE TG
Sbjct: 265 YSQREAELTEELNRTKDEIEGLRKELM-EKVKEDESTG 301
>At3g02810.1 68416.m00273 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 558
Score = 27.9 bits (59), Expect = 6.4
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 431 EDLDLKEYLASSSDESEDENQPKKIEAIFNQTTTMKIRYK----NTNYYLMKLIKKRKEE 598
ED ++ S S+ +++QP K NQ ++KI+Y+ + + +L K ++
Sbjct: 419 EDSSMESDDESDSNSEHEKDQPPKPIDEKNQAQSLKIKYRYSWEDIDVNDERLSSKSSQK 478
Query: 599 NKDMKWKLRGD*DKEKRRTGQK 664
+ D R D D+++ G++
Sbjct: 479 SNDESTSSRYDSDRDQDEKGKE 500
>At1g15520.1 68414.m01867 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1423
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 518 NQTTTMKIRYKNTNYYLMKLIKKRKEENKDMKWKLR 625
N+ K+ +++T L +LIK +E++ + WKL+
Sbjct: 71 NEIDIQKLGFQDTKKLLERLIKVGDDEHEKLLWKLK 106
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 461 SSSDESEDENQPKKIEAIFNQTTTMKIRYKNTNYYLMKLIKKRKEENKDMKWKLRGD*DK 640
+ S E++ + K + ++ KIRY+N+ ++ + R+ + K MK D
Sbjct: 71 TKSTETKQSSDAKSERNVIDEFDGRKIRYRNSEAVSVESVYGRERDEKKMKKSKDADVVD 130
Query: 641 EK 646
EK
Sbjct: 131 EK 132
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 431 EDLDLKEYLASSSDESEDENQPKKIEAIFNQTTTMK 538
++ + KE + SSS E ++ + +KIE+ F + T K
Sbjct: 469 KETEAKEKVESSSQEKNEDKETEKIESSFLEETKEK 504
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,130,691
Number of Sequences: 28952
Number of extensions: 260585
Number of successful extensions: 983
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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