Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0212
         (755 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001829-1|AAN71584.1|  450|Drosophila melanogaster RH45546p pro...    32   0.73 
AE014296-3325|AAF49033.2|  450|Drosophila melanogaster CG6680-PB...    32   0.73 
AE014296-3324|AAF49034.2|  450|Drosophila melanogaster CG6680-PA...    32   0.73 

>BT001829-1|AAN71584.1|  450|Drosophila melanogaster RH45546p
           protein.
          Length = 450

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 19/74 (25%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = +2

Query: 365 TNLHNGLTEKIGNFSIELLYHTS-NLEQSKGNLIMSPITVWTVLAVIAEARLGIRDGRSI 541
           T++   +++ + +F+++LL   S  +E++  + ++SP +VW++L ++ E   G       
Sbjct: 66  TDVLVSISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEG------E 119

Query: 542 TRYGYKQSIRTSLE 583
           TR   K+S+R ++E
Sbjct: 120 TRNQLKKSLRINVE 133


>AE014296-3325|AAF49033.2|  450|Drosophila melanogaster CG6680-PB,
           isoform B protein.
          Length = 450

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 19/74 (25%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = +2

Query: 365 TNLHNGLTEKIGNFSIELLYHTS-NLEQSKGNLIMSPITVWTVLAVIAEARLGIRDGRSI 541
           T++   +++ + +F+++LL   S  +E++  + ++SP +VW++L ++ E   G       
Sbjct: 66  TDVLVSISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEG------E 119

Query: 542 TRYGYKQSIRTSLE 583
           TR   K+S+R ++E
Sbjct: 120 TRNQLKKSLRINVE 133


>AE014296-3324|AAF49034.2|  450|Drosophila melanogaster CG6680-PA,
           isoform A protein.
          Length = 450

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 19/74 (25%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = +2

Query: 365 TNLHNGLTEKIGNFSIELLYHTS-NLEQSKGNLIMSPITVWTVLAVIAEARLGIRDGRSI 541
           T++   +++ + +F+++LL   S  +E++  + ++SP +VW++L ++ E   G       
Sbjct: 66  TDVLVSISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEG------E 119

Query: 542 TRYGYKQSIRTSLE 583
           TR   K+S+R ++E
Sbjct: 120 TRNQLKKSLRINVE 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,069,292
Number of Sequences: 53049
Number of extensions: 652139
Number of successful extensions: 1576
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)