Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0210
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    60   4e-08
UniRef50_Q4Y2Q6 Cluster: Putative uncharacterized protein; n=1; ...    40   0.086
UniRef50_Q0IWI6 Cluster: Os10g0507000 protein; n=3; Oryza sativa...    38   0.26 
UniRef50_Q5HL27 Cluster: Conserved domain protein; n=2; Staphylo...    33   5.7  
UniRef50_Q51766 Cluster: ORF2; n=1; Leptolyngbya foveolarum|Rep:...    33   5.7  
UniRef50_UPI0000DA31AB Cluster: PREDICTED: hypothetical protein;...    33   7.5  
UniRef50_A0CCP7 Cluster: Chromosome undetermined scaffold_168, w...    33   7.5  
UniRef50_A7K8Z1 Cluster: Putative uncharacterized protein z381L;...    33   9.9  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse
           transcriptase-like protein; n=25; Arthropoda|Rep:
           Endonuclease and reverse transcriptase-like protein -
           Bombyx mori (Silk moth)
          Length = 986

 Score = 60.5 bits (140), Expect = 4e-08
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +3

Query: 669 PHYLEPLRSSTVRFQRSFLPRTIRLWN 749
           P+YLEPLRSSTVRFQRSFLPRTIRLWN
Sbjct: 917 PYYLEPLRSSTVRFQRSFLPRTIRLWN 943


>UniRef50_Q4Y2Q6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 101

 Score = 39.5 bits (88), Expect = 0.086
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +2

Query: 95  SYCITIQIYLVLYCVFLIFYDRSNLYHTAQNLLIVLYYAVLI 220
           +YCI +  Y    C+FLIF+ +  L+H    L+IVLY  +++
Sbjct: 15  TYCINLLCYFFFICIFLIFH-KPCLFHWVYKLIIVLYAQIIV 55


>UniRef50_Q0IWI6 Cluster: Os10g0507000 protein; n=3; Oryza
           sativa|Rep: Os10g0507000 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 745

 Score = 37.9 bits (84), Expect = 0.26
 Identities = 20/60 (33%), Positives = 36/60 (60%)
 Frame = -1

Query: 501 CALGLFWQLASNLYFLQRLKMLLIKQCDGLAFALTLPLPISIGHIIQNKKKSFWSSYIPQ 322
           CALG+  +  ++  FL RLKM ++++C+G+ F     +  S+GH +  K KS W + + +
Sbjct: 19  CALGVEVKEYNSGDFLDRLKMEVLQKCNGVPF-----IAASLGHRLHQKDKSKWVAILQE 73


>UniRef50_Q5HL27 Cluster: Conserved domain protein; n=2;
           Staphylococcus epidermidis|Rep: Conserved domain protein
           - Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
          Length = 143

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
 Frame = +2

Query: 29  HKNEFHLLLSSMIQN*KINKKTSYCITIQIYLVLYCVFLIFYDRS-NLYHTAQNLLIVLY 205
           H  +  L +  +I   ++       I + I +++Y  FLI Y  S +LYH A   L++++
Sbjct: 35  HLTQLLLNIDFLINPDEVPTIIEVLIHLSIGILIYLAFLIIYHYSKSLYHLAYLPLVLIF 94

Query: 206 ---YAVLIFYERSKFIAFN 253
              Y +L+F  +  F +F+
Sbjct: 95  TLMYPLLVFLAQRPFFSFS 113


>UniRef50_Q51766 Cluster: ORF2; n=1; Leptolyngbya foveolarum|Rep:
           ORF2 - Leptolyngbya foveolarum
          Length = 105

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 14/54 (25%), Positives = 29/54 (53%)
 Frame = -3

Query: 508 ISLCIRIILAACIKFVFSSTFKNASN*AM*WFSFCPDSAIAYFHRSYYSEQKKI 347
           I+ CI   ++  ++F  SST  N+++ ++ W +  PD + A F   ++   + I
Sbjct: 13  IAACITSSVSISVRFTLSSTISNSASNSLVWLNNIPDGSFAAFTPHFFQLSRTI 66


>UniRef50_UPI0000DA31AB Cluster: PREDICTED: hypothetical protein;
           n=2; Euteleostomi|Rep: PREDICTED: hypothetical protein -
           Rattus norvegicus
          Length = 196

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 92  TSYCITIQIYLVLYCVFLIFYDRSNLYHTAQNLLIVLYYAVLIFY 226
           T YC    +Y VLY V+ + Y    + HTA  +L  +Y  +   Y
Sbjct: 21  TVYCALCTVYCVLYTVYCVLYTVYYVLHTAYCVLHTVYCVLCTVY 65



 Score = 32.7 bits (71), Expect = 9.9
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 92  TSYCITIQIYLVLYCVFLIFYDRSNLYHTAQNLLIVLYYAVLIFY 226
           T YCI   +Y +L+ V+ + Y    + HTA  +L  +Y A    Y
Sbjct: 126 TVYCILCTMYCILHTVYCVLYTVYYVLHTAYCVLHTVYCAQCTMY 170


>UniRef50_A0CCP7 Cluster: Chromosome undetermined scaffold_168, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_168, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 1464

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = +2

Query: 80   INKKTSYCITIQIYLVLYCVFLIFYDRSNLYHTAQNLLIVLYYAVLIFYERS 235
            +NK  S  + I IYLV Y   ++    +N+Y    NL+I++ Y+ L F E S
Sbjct: 1211 VNKSNSQFLQIFIYLVKYDQIILVLTSNNVY----NLVIIMSYSPLSFAETS 1258


>UniRef50_A7K8Z1 Cluster: Putative uncharacterized protein z381L;
           n=1; Chlorella virus ATCV-1|Rep: Putative
           uncharacterized protein z381L - Chlorella virus ATCV-1
          Length = 209

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +1

Query: 574 TSTLQRQDTKGNKNKIVAYTKKAAARHRSRVLHTTWSHCGHPQCVSRDLFCHVPSGYG 747
           T++  +  TK  K     Y +   +R+R   +  T     HP+C+SR +FC  PS  G
Sbjct: 154 TASEHKDCTKSQKT----YQEPRTSRNRRVYIALTRHDLWHPRCLSRSVFCFPPSSGG 207


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,933,280
Number of Sequences: 1657284
Number of extensions: 12866854
Number of successful extensions: 32241
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32211
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)