Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0210
         (750 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g37000.1 68417.m05242 accelerated cell death 2 (ACD2) identic...    28   5.8  
At4g29285.1 68417.m04187 expressed protein                             28   7.6  

>At4g37000.1 68417.m05242 accelerated cell death 2 (ACD2) identical
           to accelerated cell death 2 (ACD2) GI:12484129 from
           [Arabidopsis thaliana]
          Length = 319

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 663 SSPHYLEPLRSSTVRFQRSFLPR 731
           SSP YL PL S   RF ++  PR
Sbjct: 13  SSPSYLSPLTSKPSRFSKNLRPR 35


>At4g29285.1 68417.m04187 expressed protein
          Length = 76

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = -1

Query: 633 RVSYDFIFISFCVLSLKSRCPNSHKVKLKNSCINIVQARDYGFHCALGLFWQ 478
           ++ Y ++FIS  VLS+    PN+    +K   +++  ++   F   + L +Q
Sbjct: 3   KLIYSYLFISMFVLSVLLALPNAEGADIKRCVVDVKLSKPCTFQECIPLCFQ 54


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,009,166
Number of Sequences: 28952
Number of extensions: 283073
Number of successful extensions: 548
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)