Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0209
         (482 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.64 
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   4.5  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   4.5  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   7.9  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 428 CSFLKR*YYFYCLYVS 475
           C  L+R YYFYC+ ++
Sbjct: 50  CYNLRRIYYFYCVSIT 65



 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 434 FLKR*YYFYCLYV 472
           FL   YYFYC ++
Sbjct: 142 FLLCIYYFYCAFI 154


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 325 MLHERTVFLSSVTISLLMHVI*IK*TILTYK 417
           ++H  T FL  +  ++  H I  K  I  Y+
Sbjct: 370 LIHTDTYFLRDIIFAIRQHAITAKFPIYLYR 400


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 325 MLHERTVFLSSVTISLLMHVI*IK*TILTYK 417
           ++H  T FL  +  ++  H I  K  I  Y+
Sbjct: 372 LIHTDTYFLRDIIFAIRQHAITAKFPIYLYR 402


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -3

Query: 261 YDNKSTEARLHNTNTNSTHTYC 196
           YDN   +A LHN      +  C
Sbjct: 25  YDNVDIDAILHNKRLFDNYLQC 46


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -3

Query: 261 YDNKSTEARLHNTNTNSTHTYC 196
           YDN   +A LHN      +  C
Sbjct: 25  YDNVDIDAILHNKRLFDNYLQC 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,657
Number of Sequences: 336
Number of extensions: 2464
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)