Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0209
         (482 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82083-9|CAB04975.1|  635|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z81503-6|CAB04115.1|  635|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z93374-5|CAB07557.1|  935|Caenorhabditis elegans Hypothetical pr...    27   7.1  
AF022980-5|AAG24192.1|  328|Caenorhabditis elegans Serpentine re...    27   7.1  
AC006677-9|AAF39947.1|  344|Caenorhabditis elegans Serpentine re...    27   7.1  
AF036700-2|AAB88365.1|  550|Caenorhabditis elegans Hypothetical ...    27   9.4  

>Z82083-9|CAB04975.1|  635|Caenorhabditis elegans Hypothetical
           protein ZK1010.9 protein.
          Length = 635

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 258 RNIGFGNPLG*SDVISRVLLLLNVARTHCIPIVSYHFIAYARY 386
           RNI   NP G ++V+     L  +  T  I  + Y F+ YA +
Sbjct: 347 RNISISNPKGFNEVVQEGHALAFIVYTEAIAQMPYPFLWYALF 389


>Z81503-6|CAB04115.1|  635|Caenorhabditis elegans Hypothetical
           protein ZK1010.9 protein.
          Length = 635

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 258 RNIGFGNPLG*SDVISRVLLLLNVARTHCIPIVSYHFIAYARY 386
           RNI   NP G ++V+     L  +  T  I  + Y F+ YA +
Sbjct: 347 RNISISNPKGFNEVVQEGHALAFIVYTEAIAQMPYPFLWYALF 389


>Z93374-5|CAB07557.1|  935|Caenorhabditis elegans Hypothetical
           protein C06C6.7 protein.
          Length = 935

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 358 LTIGIQCVRATFNNNNTRDITS 293
           +TI ++CV +  NNN + D +S
Sbjct: 21  ITISVECVNSNINNNESLDYSS 42


>AF022980-5|AAG24192.1|  328|Caenorhabditis elegans Serpentine
           receptor, class j protein45 protein.
          Length = 328

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 437 GNYRFTFLYVSIVHFIY 387
           GNYRF  LY +  +FIY
Sbjct: 38  GNYRFLLLYFAFFNFIY 54


>AC006677-9|AAF39947.1|  344|Caenorhabditis elegans Serpentine
           receptor, class h protein56 protein.
          Length = 344

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 318 LLNVARTHCIPIVSYHF-IAYARYIDKMNY 404
           L NV+    IP ++  F +AY  Y DKMNY
Sbjct: 250 LKNVSIQISIPWIAIAFPVAYTMYADKMNY 279


>AF036700-2|AAB88365.1|  550|Caenorhabditis elegans Hypothetical
           protein M04G7.2 protein.
          Length = 550

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 112 SSTHLSNKKILFVWNSAPSGKRREIKK 192
           +S    N K  FV + +P+ KRRE+KK
Sbjct: 18  ASNGSKNSKSTFVNSKSPNQKRREVKK 44


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,991,077
Number of Sequences: 27780
Number of extensions: 219786
Number of successful extensions: 498
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)