Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0209
         (482 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   3.0  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   6.9  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   6.9  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   6.9  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   6.9  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   6.9  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   6.9  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   6.9  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   6.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 20  LLDHVKVNSEGWLIC 64
           LL HVK + EG+ +C
Sbjct: 772 LLQHVKEDREGFYLC 786


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 20  LLDHVKVNSEGWLIC 64
           LL HVK + EG+ +C
Sbjct: 768 LLQHVKEDREGFYLC 782


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = -3

Query: 255 NKSTEARLHNTNTNSTHTYCEFF 187
           +K  +  ++NTN N+T+ Y +++
Sbjct: 127 HKWFQMSINNTNNNNTNKYKDYY 149


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 164 LAVNVEKLKNSQ*VCVEF 217
           LAVN+EK +N    C ++
Sbjct: 193 LAVNIEKSENETKTCKKY 210


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 164 LAVNVEKLKNSQ*VCVEF 217
           LAVN+EK +N    C ++
Sbjct: 193 LAVNIEKSENETKTCKKY 210


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 164 LAVNVEKLKNSQ*VCVEF 217
           LAVN+EK +N    C ++
Sbjct: 193 LAVNIEKSENETKTCKKY 210


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 164 LAVNVEKLKNSQ*VCVEF 217
           LAVN+EK +N    C ++
Sbjct: 193 LAVNIEKSENETKTCKKY 210


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 164 LAVNVEKLKNSQ*VCVEF 217
           LAVN+EK +N    C ++
Sbjct: 193 LAVNIEKSENETKTCKKY 210


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 164 LAVNVEKLKNSQ*VCVEF 217
           LAVN+EK +N    C ++
Sbjct: 193 LAVNIEKSENETKTCKKY 210


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 164 LAVNVEKLKNSQ*VCVEF 217
           LAVN+EK +N    C ++
Sbjct: 193 LAVNIEKSENETKTCKKY 210


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 164 LAVNVEKLKNSQ*VCVEF 217
           LAVN+EK +N    C ++
Sbjct: 193 LAVNIEKSENETKTCKKY 210


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,906
Number of Sequences: 438
Number of extensions: 2934
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)