Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0208
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    26   0.35 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    26   0.35 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.7  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   9.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.9  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 8/33 (24%), Positives = 21/33 (63%)
 Frame = +3

Query: 168 LYKVSPLYTLVAYVAVGLFCYSILFVVFILYHV 266
           + K++  +++   V++G+  + +LF  + LY+V
Sbjct: 244 MQKINSAFSVQLLVSIGVSLFDVLFQAYYLYYV 276


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 8/33 (24%), Positives = 21/33 (63%)
 Frame = +3

Query: 168 LYKVSPLYTLVAYVAVGLFCYSILFVVFILYHV 266
           + K++  +++   V++G+  + +LF  + LY+V
Sbjct: 244 MQKINSAFSVQLLVSIGVSLFDVLFQAYYLYYV 276


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 153 ISYNFLYK-VSPLYTLVAYVAVGLFCYSILFVVFILYHVWYSESLSM 290
           I  NF +  ++     + +V   L+C+S    + +L  +W S +  +
Sbjct: 525 ICKNFCFGFITKQLIFMIFVTYQLYCWSSFLKISVLQSLWASPTCDL 571


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 499 YWKAMNILHDPN 534
           YWKA+   +DP+
Sbjct: 102 YWKALEAKYDPD 113


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 140 ARIINLIQFFVQSVATLYTSS 202
           A I+  +  F Q  AT+YTSS
Sbjct: 268 ALIVRALFLFFQLWATVYTSS 288


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 140 ARIINLIQFFVQSVATLYTSS 202
           A I+  +  F Q  AT+YTSS
Sbjct: 264 ALIVRALFLFFQLWATVYTSS 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,193
Number of Sequences: 336
Number of extensions: 3902
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)