Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0208
         (713 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0663 - 5059881-5060119,5060682-5060898,5061008-5061838,506...    29   2.8  
02_02_0682 - 12923103-12923747,12924607-12924870,12924953-129252...    29   3.7  
12_01_0969 - 9765114-9765664,9767963-9768512,9769507-9769561,976...    28   6.4  
01_01_0047 + 334809-334877,334966-335074,335159-335299,336337-33...    28   6.4  
06_02_0349 + 15032131-15033117                                         28   8.5  
04_01_0505 + 6599181-6599249,6599537-6599632,6599931-6599962,660...    28   8.5  

>01_01_0663 -
           5059881-5060119,5060682-5060898,5061008-5061838,
           5063560-5064120
          Length = 615

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 201 LLVYKVATLCTKNCMRLIMRAV 136
           LL+  VA LC K+CM+L+ R +
Sbjct: 203 LLILSVANLCNKSCMKLLERCL 224


>02_02_0682 -
           12923103-12923747,12924607-12924870,12924953-12925219,
           12925301-12925529,12925614-12926295,12926409-12926682,
           12926822-12927347,12927460-12927698,12927799-12927896,
           12928017-12928020,12928657-12928832,12929593-12929647,
           12930787-12931047
          Length = 1239

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 159 YNFLYKVSPLYTLVAYVAVGLFCYSILFVVFILY--HVWYSESLSME 293
           YN   K+S    +    A+GL   S++F+VF  Y   VWY   L +E
Sbjct: 212 YNEFLKISYRSAVHQGAAMGLGIGSVMFIVFCSYGLAVWYGAKLIIE 258


>12_01_0969 -
           9765114-9765664,9767963-9768512,9769507-9769561,
           9769918-9769980,9770547-9771325
          Length = 665

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 442 HYRRSHDCNTGFDFIHHCSYWK 507
           HY  S  C TG++  H+ +YW+
Sbjct: 341 HYEISSYCKTGYECKHNVTYWQ 362


>01_01_0047 + 334809-334877,334966-335074,335159-335299,336337-336498,
            336577-336734,337180-337310,337385-337472,337587-337690,
            338346-338444,339060-339116,339262-339337,339519-339602,
            339969-340010,340128-340198,341516-341564,342370-342441,
            343149-343286,343393-343473,344166-344353,344591-345188,
            345274-345342,346729-346854,347048-347175,347986-348142,
            348342-348388,348472-348535,348691-348765,349292-349414,
            349797-349982,351179-351303,351390-351459,351974-352101,
            352585-352726,353065-353163,353239-353285,353598-353652,
            353758-353967,354686-354757,354836-354905,355231-355414,
            355521-355644,355732-355863,356252-356317,356805-356852,
            357572-357676,357728-357865,358097-358399,358482-358594,
            359082-359148,359236-359310,359395-359517,359610-359618,
            360156-360320,360401-360502,361545-361696,361794-361995,
            362079-362126,362215-362298,362613-362657,363302-363385,
            363890-363970,364044-364133,364217-364279,364824-364841,
            365238-365378,365494-365550,366091-366185,366275-366383,
            367067-367156,367308-367387,367480-367558,367742-367903,
            368005-368136,368335-368469,368553-368618,369317-369457,
            369575-369648,369685-369910
          Length = 2905

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = +1

Query: 478  DFIHHCSYWK-AMNILHDPNEDMNLISSIVLTALSTV--GLL--ITGLCV 612
            +FI HC  W  +  IL     D+N +S I+   LS V  G    I GLC+
Sbjct: 1075 NFIEHCCSWLLSFLILRGETADLNWLSKILSQPLSAVIKGYFVPIFGLCI 1124


>06_02_0349 + 15032131-15033117
          Length = 328

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 22/65 (33%), Positives = 29/65 (44%)
 Frame = +3

Query: 24  KRYTSLCMSVDYTISRNLRDGGIGTRPISSNGLWCCALLPALLISYNFLYKVSPLYTLVA 203
           +R  S C S  Y + RNL  G  G   +  N + CCA  P    S   + +    YT V 
Sbjct: 147 ERCDSTCDSAGY-LCRNL-PGCRGA--LEENNMSCCAYRPRAAESLRLMLRHCESYTSVY 202

Query: 204 YVAVG 218
           + AVG
Sbjct: 203 WRAVG 207


>04_01_0505 +
           6599181-6599249,6599537-6599632,6599931-6599962,
           6601191-6601428,6601852-6601905,6601923-6602130,
           6602353-6602590,6602788-6602962,6603074-6603442
          Length = 492

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 375 EKDNDVVKPCVLNIKFIRADTR 310
           E+DND V P  LN+  +RA TR
Sbjct: 106 EEDNDYVDPPTLNLTVLRAATR 127


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,707,151
Number of Sequences: 37544
Number of extensions: 351273
Number of successful extensions: 812
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)