Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0208
         (713 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094927-1|AAM11280.1|  375|Drosophila melanogaster RH47633p pro...    37   0.031
AE013599-2314|AAF57978.1|  503|Drosophila melanogaster CG8311-PA...    37   0.031
AY051538-1|AAK92962.1|  409|Drosophila melanogaster GH19029p pro...    29   6.3  
AE014134-2289|AAF53252.2|  409|Drosophila melanogaster CG5287-PA...    29   6.3  

>AY094927-1|AAM11280.1|  375|Drosophila melanogaster RH47633p
           protein.
          Length = 375

 Score = 36.7 bits (81), Expect = 0.031
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
 Frame = +2

Query: 296 CIASSLVSALMNFIFNTQGLTTSLSFSLTAVYL----YSTMLRWSLTKFPKTYTIGEAMI 463
           C+ S L     +  F    + TSL+F++   ++    Y  +  ++L  F +++T GEA +
Sbjct: 118 CLVSLLPGVATSLSFYLL-VDTSLTFAIIVGFVMTSAYQQIYIYTLRGFQRSFTYGEASV 176

Query: 464 VTQGLTLFTIAVIGR 508
             QGL LF ++ I R
Sbjct: 177 FVQGLVLFALSAIHR 191


>AE013599-2314|AAF57978.1|  503|Drosophila melanogaster CG8311-PA
           protein.
          Length = 503

 Score = 36.7 bits (81), Expect = 0.031
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
 Frame = +2

Query: 296 CIASSLVSALMNFIFNTQGLTTSLSFSLTAVYL----YSTMLRWSLTKFPKTYTIGEAMI 463
           C+ S L     +  F    + TSL+F++   ++    Y  +  ++L  F +++T GEA +
Sbjct: 118 CLVSLLPGVATSLSFYLL-VDTSLTFAIIVGFVMTSAYQQIYIYTLRGFQRSFTYGEASV 176

Query: 464 VTQGLTLFTIAVIGR 508
             QGL LF ++ I R
Sbjct: 177 FVQGLVLFALSAIHR 191


>AY051538-1|AAK92962.1|  409|Drosophila melanogaster GH19029p
           protein.
          Length = 409

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = +2

Query: 389 YLYSTMLRWSLTKFPKTYTIGEAMIVTQGLTLFTIAVIG 505
           +L +T+  W   K+P    +G+      G+T   + ++G
Sbjct: 234 FLATTLALWKFNKYPSQVFVGDTYCYFAGMTFAVVGILG 272


>AE014134-2289|AAF53252.2|  409|Drosophila melanogaster CG5287-PA
           protein.
          Length = 409

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = +2

Query: 389 YLYSTMLRWSLTKFPKTYTIGEAMIVTQGLTLFTIAVIG 505
           +L +T+  W   K+P    +G+      G+T   + ++G
Sbjct: 234 FLATTLALWKFNKYPSQVFVGDTYCYFAGMTFAVVGILG 272


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,853,799
Number of Sequences: 53049
Number of extensions: 652240
Number of successful extensions: 1611
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)