Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0207
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   2.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.9  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   2.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.8  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.8  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.8  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 88  TDVKVAPNFVFGETNKSED 144
           ++  ++P+ VFG+  KSED
Sbjct: 201 SEQSLSPDTVFGDDGKSED 219


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 185 SNAGTFPAGNFFKKSSDL 132
           S  GT+P+ N++  +SD+
Sbjct: 12  SQHGTYPSDNYYNYTSDI 29


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 185 SNAGTFPAGNFFKKSSDL 132
           S  GT+P+ N++  +SD+
Sbjct: 12  SQHGTYPSDNYYNYTSDI 29


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 185 SNAGTFPAGNFFKKSSDL 132
           S  GT+P+ N++  +SD+
Sbjct: 12  SQHGTYPSDNYYNYTSDI 29


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 429 DGHLLTRTFLVTERITLADVIV 494
           DGH++  TF  +E   + DV++
Sbjct: 624 DGHVILETFHFSEADFVMDVVM 645


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 429 DGHLLTRTFLVTERITLADVIV 494
           DGH++  TF  +E   + DV++
Sbjct: 624 DGHVILETFHFSEADFVMDVVM 645


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 121 QIRNSVLLSHQSRNIVRRSTLYKRG 47
           QIR +  +SH+  N      L++RG
Sbjct: 218 QIRGTFFVSHKYTNYSAVQDLHRRG 242


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 121 QIRNSVLLSHQSRNIVRRSTLYKRG 47
           QIR +  +SH+  N      L++RG
Sbjct: 225 QIRGTFFVSHKYTNYSAVQDLHRRG 249


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 421 KYWTDIFSHAP 453
           K+WTDI++  P
Sbjct: 501 KFWTDIYNSNP 511


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 421 KYWTDIFSHAP 453
           K+WTDI++  P
Sbjct: 503 KFWTDIYNSNP 513


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,825
Number of Sequences: 336
Number of extensions: 3642
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)