Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0207
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 61 8e-10
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 61 8e-10
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 45 5e-05
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 42 3e-04
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 31 0.71
AC024200-14|AAF36005.1| 557|Caenorhabditis elegans Hypothetical... 31 0.71
U41015-5|AAA82310.1| 166|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 29 2.2
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC006696-10|AAF39990.1| 228|Caenorhabditis elegans Hypothetical... 29 2.9
Z67756-1|CAA91762.1| 157|Caenorhabditis elegans Hypothetical pr... 29 3.8
U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormon... 29 3.8
U53332-10|AAK31530.1| 136|Caenorhabditis elegans Frataxin (invo... 29 3.8
AY048153-1|AAL05950.1| 136|Caenorhabditis elegans frataxin prot... 29 3.8
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 28 5.0
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 28 5.0
AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical ... 28 5.0
AC006720-4|AAF60448.1| 330|Caenorhabditis elegans Hypothetical ... 28 5.0
Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical p... 28 6.6
Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical p... 28 6.6
AF016448-13|AAB65963.1| 239|Caenorhabditis elegans Hypothetical... 28 6.6
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/75 (40%), Positives = 47/75 (62%)
Frame = +3
Query: 270 ATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTR 449
+ A QW +++ LLPA +V P + F+K+ VE+ K++L L+VLD L+ +
Sbjct: 43 SANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKK 102
Query: 450 TFLVTERITLADVIV 494
T+LV ER++LADV V
Sbjct: 103 TYLVGERLSLADVSV 117
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2
Query: 512 AFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLT 625
AFQ+VLD + R S++NV RWF TV +QP V V+G ++
Sbjct: 124 AFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVS 161
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/75 (40%), Positives = 47/75 (62%)
Frame = +3
Query: 270 ATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTR 449
+ A QW +++ LLPA +V P + F+K+ VE+ K++L L+VLD L+ +
Sbjct: 68 SANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKK 127
Query: 450 TFLVTERITLADVIV 494
T+LV ER++LADV V
Sbjct: 128 TYLVGERLSLADVSV 142
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2
Query: 512 AFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLT 625
AFQ+VLD + R S++NV RWF TV +QP V V+G ++
Sbjct: 149 AFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVS 186
Score = 35.9 bits (79), Expect = 0.025
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +1
Query: 19 GVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADG 198
G LY +NFR K LIAA+ + V +A G+ ++ KFP G PAFE G
Sbjct: 3 GKLYGNKDNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---G 50
Query: 199 KVLLTESNAIAYYVANESL-AEEI-WL 273
LL + +I ++ S AE + WL
Sbjct: 51 DALLFGAESIGLHLTGTSANAETVQWL 77
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 518 QHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLT 625
Q+VLD + R S++NV RWF TV +QP V V+G ++
Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVS 153
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 270 ATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALK-VLDGH 437
+ A QW +++ LLPA +V P + F+K+ VE+ K++L L+ VLD +
Sbjct: 68 SANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYKNELNGQLQYVLDAN 124
Score = 35.9 bits (79), Expect = 0.025
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +1
Query: 19 GVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADG 198
G LY +NFR K LIAA+ + V +A G+ ++ KFP G PAFE G
Sbjct: 3 GKLYGNKDNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---G 50
Query: 199 KVLLTESNAIAYYVANESL-AEEI-WL 273
LL + +I ++ S AE + WL
Sbjct: 51 DALLFGAESIGLHLTGTSANAETVQWL 77
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 10 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSE-DFLKKFPAGKVPAFE 186
MA +LY+Y + A++ IA D + P +F E +K+ +F+K PA KVP
Sbjct: 1 MAKPILYSYWRSSCAWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTL- 59
Query: 187 SADGKVLLTESNAIAYYVANESLAEEIWLPK 279
+ LTES AI Y+ +E+ + +LPK
Sbjct: 60 -VINGLSLTESLAIIEYL-DEAYPDPPFLPK 88
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
protein ZK430.1 protein.
Length = 1650
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 253 DFHWQRSKRWHCFQLEAPFHRHFRMQALFRQETSSR-SLRTCWSRQIRNSV 104
DF W+RSK W Q ++ R SS+ S+ TC + IR++V
Sbjct: 153 DFDWKRSKEWQFMQQFTKTETPIPFTSIARATLSSKHSIITCITDHIRHAV 203
>AC024200-14|AAF36005.1| 557|Caenorhabditis elegans Hypothetical
protein Y71F9AL.4 protein.
Length = 557
Score = 31.1 bits (67), Expect = 0.71
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +3
Query: 201 GASN*KQCHRLLRCQ*KSRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQ 380
G S K HR+L+ K+ G + ++ +QWASW D +P SC L ++ +K+
Sbjct: 308 GKSKDKITHRVLKVVVKATGQE--SKLNHYQWASWPDHG-MPDSCDTALRLLSAVKKDKK 364
Query: 381 NV 386
V
Sbjct: 365 PV 366
>U41015-5|AAA82310.1| 166|Caenorhabditis elegans Hypothetical
protein F20B6.1 protein.
Length = 166
Score = 30.7 bits (66), Expect = 0.94
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +3
Query: 201 GASN*KQCHRLLRCQ*KSRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQ 380
G S K HR+L+ K+ G + ++ +QWASW D +P SC L ++ +K+
Sbjct: 53 GKSKDKITHRVLKVVVKATGQE--SKLNHYQWASWPDHG-MPDSCDTAHRLLSAVKKDKK 109
Query: 381 NV 386
V
Sbjct: 110 PV 111
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
protein F25C8.3b protein.
Length = 3175
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 521 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSL 622
H L PS+ ++L +V RW L A P V GSL
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSL 118
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
protein F25C8.3a protein.
Length = 3184
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 521 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSL 622
H L PS+ ++L +V RW L A P V GSL
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSL 118
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 145 FLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLAEEIWLPKPVSGSGH 300
+L K P G+VPA E +GKV + ESN I Y+ +E LP+ H
Sbjct: 138 YLPKSPIGRVPALE-INGKV-VWESNVIVEYL-DELFPTNTILPRDAYEKAH 186
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +1
Query: 37 PENFRAYKALI--AAQYS--GTDVKVAPNFVFGET--NKSEDFLKKFPAGKVPAFESADG 198
P FR Y AAQ + VK P+ V K + + K G+VP E A+G
Sbjct: 24 PNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWYFTKNYKGQVPTLEHAEG 83
Query: 199 KVLLTESNAIAYYV 240
K L+ ES I Y+
Sbjct: 84 KKLVIESAVIPEYL 97
>AC006696-10|AAF39990.1| 228|Caenorhabditis elegans Hypothetical
protein W08E12.1 protein.
Length = 228
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 512 HEQCTEDNDIGK-CDSLGNKEGACEKMSVQYF*GGQ 408
HEQ +I K CD + N G CEK V++ G Q
Sbjct: 97 HEQSKIFEEISKECDHIMNSAGDCEKCQVEHENGAQ 132
>Z67756-1|CAA91762.1| 157|Caenorhabditis elegans Hypothetical
protein R07A4.2 protein.
Length = 157
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -2
Query: 159 KLLQEVFGLVGLAKYEIRCYFHISPGILCGDQRFISAEVFRISV 28
K+LQ +FG + L+ CY + + CG++ F S++VF++ V
Sbjct: 22 KILQLIFGFINLSA-NYWCYPN-QHFLYCGERYFTSSQVFQLIV 63
>U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 78 protein.
Length = 387
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 300 SWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAAL 419
S+ ++ +L A C W + + + +K+NV + KS L+ L
Sbjct: 298 SFEENAILKALCCWQTAHFKLEECDKENVRKQKSLLVQCL 337
>U53332-10|AAK31530.1| 136|Caenorhabditis elegans Frataxin
(involved in human friedrich'sataxia) homolog protein 1
protein.
Length = 136
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 157 FPAGKVPAFESADGKVLLTESNAIAYYVAN-ESLAEEIWLPKPVSGSGHHGL 309
FP + A G + + S ++ YV N +S ++IWL P+SG + L
Sbjct: 47 FPVSEQFDVSHAMGVLTVNVSKSVGTYVINKQSPNKQIWLSSPMSGPKRYDL 98
>AY048153-1|AAL05950.1| 136|Caenorhabditis elegans frataxin
protein.
Length = 136
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 157 FPAGKVPAFESADGKVLLTESNAIAYYVAN-ESLAEEIWLPKPVSGSGHHGL 309
FP + A G + + S ++ YV N +S ++IWL P+SG + L
Sbjct: 47 FPVSEQFDVSHAMGVLTVNVSKSVGTYVINKQSPNKQIWLSSPMSGPKRYDL 98
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 133 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 240
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 62 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 97
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 133 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 240
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 380
>AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical
protein Y57E12AL.2 protein.
Length = 121
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 342 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTER 470
VF L ++ F +N E+ KS++LAA G TF+ T +
Sbjct: 35 VFALLAVVAFANRNPEQMKSEMLAAGVSAAGVATISTFMETHK 77
>AC006720-4|AAF60448.1| 330|Caenorhabditis elegans Hypothetical
protein Y17G9B.7 protein.
Length = 330
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 226 IAYYVANESLAEEIWLPKPVSGSGHHGLTANYCLLPALGSSLTLVSCNSTNRMLNV 393
IAY+VA + LPK +SG G + + Y + G + T++ + N L +
Sbjct: 271 IAYHVAPADREFIVHLPKKLSGCGDYRVIGGYDVRRNDGMTATIIVADRANVFLKM 326
>Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical
protein R06F6.8a protein.
Length = 1468
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -3
Query: 611 RRPTLAAGGRRSGT----NAERLSATNGRSGLARAGKHEQCTEDNDIGKCDSLGNKEGAC 444
RRPT+++ S T N + A GR R H Q TE D + DS+G +
Sbjct: 987 RRPTVSSPSADSSTEFVINRFQAGAAGGRLNKVR---HSQSTEQKDAPRKDSIGG--SSK 1041
Query: 443 EKMSVQYF*GGQ 408
+KM++ + G+
Sbjct: 1042 DKMALSWGLSGE 1053
>Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical
protein R06F6.8b protein.
Length = 1470
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -3
Query: 611 RRPTLAAGGRRSGT----NAERLSATNGRSGLARAGKHEQCTEDNDIGKCDSLGNKEGAC 444
RRPT+++ S T N + A GR R H Q TE D + DS+G +
Sbjct: 989 RRPTVSSPSADSSTEFVINRFQAGAAGGRLNKVR---HSQSTEQKDAPRKDSIGG--SSK 1043
Query: 443 EKMSVQYF*GGQ 408
+KM++ + G+
Sbjct: 1044 DKMALSWGLSGE 1055
>AF016448-13|AAB65963.1| 239|Caenorhabditis elegans Hypothetical
protein F41E6.1 protein.
Length = 239
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 160 ETSSRSLRTCWSRQIRNSVLLSHQSRNIVR 71
ET +R CWSR N+V R++VR
Sbjct: 167 ETGGAIVRDCWSRVFSNAVKNPRARRDVVR 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,255,220
Number of Sequences: 27780
Number of extensions: 358556
Number of successful extensions: 1044
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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