Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0204
(611 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK223583-1|BAD97303.1| 593|Homo sapiens tigger transposable ele... 56 1e-07
BC037869-1|AAH37869.1| 512|Homo sapiens tigger transposable ele... 35 0.20
BC109202-1|AAI09203.1| 524|Homo sapiens jerky homolog-like (mou... 34 0.34
AY744466-1|AAV30885.1| 278|Homo sapiens FSHD region gene 2 prot... 33 1.0
AY028079-2|AAK21977.1| 278|Homo sapiens FSHD Region Gene 2 prot... 33 1.0
AL731696-1|CAH69901.1| 279|Homo sapiens novel protein similar t... 33 1.0
AY714545-1|AAU14220.1| 278|Homo sapiens FSHD region gene 2 prot... 32 1.4
CR533559-1|CAG38590.1| 521|Homo sapiens TIGD6 protein. 31 3.2
BC117249-1|AAI17250.1| 521|Homo sapiens tigger transposable ele... 31 3.2
AK056604-1|BAB71230.1| 521|Homo sapiens protein ( Homo sapiens ... 31 3.2
AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein. 30 5.6
AC104785-1|AAY40951.1| 525|Homo sapiens unknown protein. 30 5.6
AL354873-4|CAI10908.1| 778|Homo sapiens actin binding LIM prote... 29 9.8
AL354873-3|CAI10909.1| 846|Homo sapiens actin binding LIM prote... 29 9.8
AL133384-13|CAI40140.1| 778|Homo sapiens actin binding LIM prot... 29 9.8
AL133384-12|CAI40139.1| 846|Homo sapiens actin binding LIM prot... 29 9.8
AF005654-1|AAC51676.1| 778|Homo sapiens actin-binding double-zi... 29 9.8
>AK223583-1|BAD97303.1| 593|Homo sapiens tigger transposable
element derived 5 variant protein.
Length = 593
Score = 56.0 bits (129), Expect = 1e-07
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = +1
Query: 271 DKIEAIQRVNDGESKASVARDIGVPESTLRGWCKNEDKLRYMTSRL 408
DK++AI+RV GE +ASV RD GVP TLRG K+E KLR+ +L
Sbjct: 11 DKLQAIERVKGGERQASVCRDFGVPGGTLRGCLKDEPKLRWFLEQL 56
>BC037869-1|AAH37869.1| 512|Homo sapiens tigger transposable
element derived 4 protein.
Length = 512
Score = 35.1 bits (77), Expect = 0.20
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +1
Query: 256 ALTPGDKIEAIQRVNDGESKASVARDIGVPESTLRGWCKNEDKL 387
+L+ +KI+ I V G+ KA +A + G+ +++L KN+DK+
Sbjct: 20 SLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKV 63
>BC109202-1|AAI09203.1| 524|Homo sapiens jerky homolog-like (mouse)
protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.34
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 259 LTPGDKIEAIQRVNDGESKASVARDIGVPESTLRGWCKNEDKL 387
LT DK++ I+++ DG S +A G+ E+T+R KN++K+
Sbjct: 10 LTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKI 52
>AY744466-1|AAV30885.1| 278|Homo sapiens FSHD region gene 2 protein
protein.
Length = 278
Score = 32.7 bits (71), Expect = 1.0
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 165 DCPVKNCKQNTRRLAISEWPLWQQRVSDLCRSDARRQNR---GHTTGQRRRVQGIGRTRH 335
+CP K C + + + S P+ + + C + R ++R G + R R G+
Sbjct: 112 NCPEKECSLSLNKKSRSSTPVHNSEIQETCDAHHRGRSRACTGRSKRHRSRALGVQTPSI 171
Query: 336 RRARVHSARLVQE 374
R++ V S R + E
Sbjct: 172 RKSLVTSVRAMSE 184
>AY028079-2|AAK21977.1| 278|Homo sapiens FSHD Region Gene 2 protein
protein.
Length = 278
Score = 32.7 bits (71), Expect = 1.0
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 165 DCPVKNCKQNTRRLAISEWPLWQQRVSDLCRSDARRQNR---GHTTGQRRRVQGIGRTRH 335
+CP K C + + + S P+ + + C + R ++R G + R R G+
Sbjct: 112 NCPEKECSLSLNKKSRSSTPVHNSEIQETCDAHHRGRSRACTGRSKRHRSRALGVQTPSI 171
Query: 336 RRARVHSARLVQE 374
R++ V S R + E
Sbjct: 172 RKSLVTSVRAMSE 184
>AL731696-1|CAH69901.1| 279|Homo sapiens novel protein similar to
FSHD Region Gene 2 protein protein.
Length = 279
Score = 32.7 bits (71), Expect = 1.0
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 165 DCPVKNCKQNTRRLAISEWPLWQQRVSDLCRSDARRQNR---GHTTGQRRRVQGIGRTRH 335
+CP K C + + + S P+ + + C + R ++R G + R R G+
Sbjct: 113 NCPEKECSLSLNKKSRSSTPVHNSEIQETCDAHHRGRSRACTGRSKRHRSRALGVQTPSI 172
Query: 336 RRARVHSARLVQE 374
R++ V S R + E
Sbjct: 173 RKSLVTSVRAMSE 185
>AY714545-1|AAU14220.1| 278|Homo sapiens FSHD region gene 2 protein
protein.
Length = 278
Score = 32.3 bits (70), Expect = 1.4
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +3
Query: 165 DCPVKNCKQNTRRLAISEWPLWQQRVSDLCRSDARRQNR---GHTTGQRRRVQGIGRTRH 335
+CP K C + + + S + + + C + R +R GH+ R R G+
Sbjct: 112 NCPEKECSLSLNKKSRSSTAVHNSEIQETCDAHHRGHSRACTGHSKRHRSRALGVQTPSI 171
Query: 336 RRARVHSARLVQE 374
R++ V S R + E
Sbjct: 172 RKSLVTSVRAMSE 184
>CR533559-1|CAG38590.1| 521|Homo sapiens TIGD6 protein.
Length = 521
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 232 NKG*ATYAALTPGDKIEAIQRVNDGESKASVARDIGVPESTLRGWCKNEDK 384
NKG + +K++ + V+ G+ K VA++ G+ STL + K+ K
Sbjct: 3 NKGNKKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTK 53
>BC117249-1|AAI17250.1| 521|Homo sapiens tigger transposable
element derived 6 protein.
Length = 521
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 232 NKG*ATYAALTPGDKIEAIQRVNDGESKASVARDIGVPESTLRGWCKNEDK 384
NKG + +K++ + V+ G+ K VA++ G+ STL + K+ K
Sbjct: 3 NKGNKKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTK 53
>AK056604-1|BAB71230.1| 521|Homo sapiens protein ( Homo sapiens
cDNA FLJ32042 fis, clone NTONG2000878, weakly similar to
MAJOR CENTROMERE AUTOANTIGEN B. ).
Length = 521
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 232 NKG*ATYAALTPGDKIEAIQRVNDGESKASVARDIGVPESTLRGWCKNEDK 384
NKG + +K++ + V+ G+ K VA++ G+ STL + K+ K
Sbjct: 3 NKGKKKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTK 53
>AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein.
Length = 1004
Score = 30.3 bits (65), Expect = 5.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 474 PGRALTPRALRPDLXAASIPTSTATQLPLAPADAPVELTTKRSEP 608
PG A P + RP + S P + P AD P++L+ K P
Sbjct: 758 PGHAPAPESPRPGSGSGSGPGLAPARSPGPAADGPIDLSKKPRRP 802
>AC104785-1|AAY40951.1| 525|Homo sapiens unknown protein.
Length = 525
Score = 30.3 bits (65), Expect = 5.6
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Frame = +1
Query: 259 LTPGDKIEAIQRVNDGESKASVARDIGVPESTLRGWCKNEDK-LRYM-----TSRLSSPD 420
LT DK++ I+++ +G S ++ G+ EST+R KN+++ + Y TS +S
Sbjct: 10 LTIKDKLDIIKKLEEGISFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTSGVSKRK 69
Query: 421 TDKSNDGEPLEK 456
+ KS+ E L++
Sbjct: 70 SMKSSTYEELDR 81
>AL354873-4|CAI10908.1| 778|Homo sapiens actin binding LIM protein
1 protein.
Length = 778
Score = 29.5 bits (63), Expect = 9.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 231 QQRVSDLCRSDARRQNRGHTTGQRRRVQGIGRTRHRRARV 350
+ +V+ R+ AR NR + RRV G T HRRA +
Sbjct: 18 KSKVTSSERTSARGSNRKRLIVEDRRVSGTSFTAHRRATI 57
>AL354873-3|CAI10909.1| 846|Homo sapiens actin binding LIM protein
1 protein.
Length = 846
Score = 29.5 bits (63), Expect = 9.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 231 QQRVSDLCRSDARRQNRGHTTGQRRRVQGIGRTRHRRARV 350
+ +V+ R+ AR NR + RRV G T HRRA +
Sbjct: 18 KSKVTSSERTSARGSNRKRLIVEDRRVSGTSFTAHRRATI 57
>AL133384-13|CAI40140.1| 778|Homo sapiens actin binding LIM protein
1 protein.
Length = 778
Score = 29.5 bits (63), Expect = 9.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 231 QQRVSDLCRSDARRQNRGHTTGQRRRVQGIGRTRHRRARV 350
+ +V+ R+ AR NR + RRV G T HRRA +
Sbjct: 18 KSKVTSSERTSARGSNRKRLIVEDRRVSGTSFTAHRRATI 57
>AL133384-12|CAI40139.1| 846|Homo sapiens actin binding LIM protein
1 protein.
Length = 846
Score = 29.5 bits (63), Expect = 9.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 231 QQRVSDLCRSDARRQNRGHTTGQRRRVQGIGRTRHRRARV 350
+ +V+ R+ AR NR + RRV G T HRRA +
Sbjct: 18 KSKVTSSERTSARGSNRKRLIVEDRRVSGTSFTAHRRATI 57
>AF005654-1|AAC51676.1| 778|Homo sapiens actin-binding
double-zinc-finger protein protein.
Length = 778
Score = 29.5 bits (63), Expect = 9.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 231 QQRVSDLCRSDARRQNRGHTTGQRRRVQGIGRTRHRRARV 350
+ +V+ R+ AR NR + RRV G T HRRA +
Sbjct: 18 KSKVTSSERTSARGSNRKRLIVEDRRVSGTSFTAHRRATI 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,726,531
Number of Sequences: 237096
Number of extensions: 1754023
Number of successful extensions: 4702
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4702
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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