Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0203
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.7  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 278 MLTTCRDHTSLNDVSGRTCHKFHAI 352
           ++    DH  LND+    C KF  I
Sbjct: 193 LVVNALDHLFLNDILSDICDKFEQI 217


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 278 MLTTCRDHTSLNDVSGRTCHKFHAI 352
           ++    DH  LND+    C KF  I
Sbjct: 149 LVVNALDHLFLNDILSDICDKFEQI 173


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 677 SYNIIKYTCHFLNIRNII*SRLPTLKT 597
           S+  ++YT   LN+ N+  S++P L T
Sbjct: 439 SFQGLEYTLLHLNLDNVSLSQVPALST 465


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 520 CNYKAIEYYIFNCCKYSFKMLFILVTV 600
           C Y     +I   C Y F   FI+ TV
Sbjct: 99  CTYYFYYAFIILLCVYYFYYAFIIFTV 125


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 606 TENSNQYEQHFKTVFTTIKYIILYCF 529
           +++ ++ E H K V    K   LYCF
Sbjct: 53  SKSFHRNEIHIKIVLMFFKEASLYCF 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,647
Number of Sequences: 336
Number of extensions: 3717
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)