Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0200
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   2.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   3.5  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    22   4.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   6.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   6.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.0  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/69 (24%), Positives = 31/69 (44%)
 Frame = -2

Query: 711 FVTFQFFRLSRST*AIIAYLYITFVIATQANTRFSFSRYTETFRFITFASFITLAVVTAK 532
           F   +FF L+R T   ++   ITF+I      + S+ + +    FI  A+   L ++   
Sbjct: 306 FTAARFFELNRRTILGVSNAVITFLIVMV--QKASYEKLSPVVLFIQVAADTVLFILNIS 363

Query: 531 ELSIFLTKQ 505
            + I   K+
Sbjct: 364 TIIITARKK 372


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 745 TFLQLV--HKCNQICHISVL*TEQEYMSNHRIP 653
           T L+L+  H C++ C +  +  E++  +  RIP
Sbjct: 268 TVLELMPKHACSEYCRVFKMLQEEDIFTPDRIP 300


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/40 (22%), Positives = 18/40 (45%)
 Frame = +2

Query: 299 ESNFNCTVFNKKMACKTNICKRLTSEEDQRKQCNIKVCND 418
           E  F C + NK+     ++ K + +     K+ +   C+D
Sbjct: 372 EKRFACPICNKRFMRSDHLAKHVKTHNGNGKKGSSDSCSD 411


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 306 FDSACGLSSVRRSYFKSLSY 247
           F S CG SS   +Y KS  Y
Sbjct: 20  FGSTCGGSSSSMAYLKSAPY 39



 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 647 LPLSSLHRQIQGFPSVGIQR 588
           LP+ SLH  + G+P+ G QR
Sbjct: 49  LPVDSLHSSMAGYPA-GNQR 67


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 748 MTFLQLVHKCNQICHISVL*T 686
           M  LQ+ H C Q C ++ + T
Sbjct: 1   MLILQIAHLCAQFCLLAAIFT 21


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 529 AFHLPYKANAWLSF 488
           +F  PYKA+ W  F
Sbjct: 384 SFKSPYKASCWAQF 397


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 529 AFHLPYKANAWLSF 488
           +F  PYKA+ W  F
Sbjct: 384 SFKSPYKASCWAQF 397


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
 Frame = -2

Query: 723 NATRFVTFQFFRLSRST*AIIAYLYITFVIA------TQANTRFSFSRYTETFRFITFAS 562
           N  RF   +FF ++R T   I    +TF+I       TQ +T  +F     TF  I F S
Sbjct: 315 NFPRFYAARFFVINRGTILGILDAIVTFLIVMIQFEMTQNSTNINF---VSTFFKIPFYS 371


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,572
Number of Sequences: 336
Number of extensions: 3952
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)