Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0200
(754 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0) 37 0.020
SB_8046| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_2315| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 34 0.14
SB_19405| Best HMM Match : DMP1 (HMM E-Value=3.8) 33 0.19
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23) 33 0.19
SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0) 33 0.33
SB_9510| Best HMM Match : Keratin_B2 (HMM E-Value=3.8e-05) 32 0.43
SB_10244| Best HMM Match : Laminin_EGF (HMM E-Value=0) 32 0.57
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 31 1.0
SB_5218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_33333| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_36593| Best HMM Match : PHD (HMM E-Value=3.4e-18) 31 1.3
SB_34555| Best HMM Match : EGF (HMM E-Value=7.00649e-45) 31 1.3
SB_24569| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 31 1.3
SB_17752| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0) 31 1.3
SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05) 31 1.3
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 30 1.8
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.1
SB_38444| Best HMM Match : TMS_TDE (HMM E-Value=0) 29 3.1
SB_30961| Best HMM Match : I-set (HMM E-Value=0) 29 3.1
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 29 3.1
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 29 4.1
SB_28272| Best HMM Match : EGF (HMM E-Value=2.6e-15) 29 4.1
SB_39250| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 29 4.1
SB_38090| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_37171| Best HMM Match : EGF (HMM E-Value=2.6e-15) 29 4.1
SB_52925| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 5.4
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14) 29 5.4
SB_14427| Best HMM Match : Cadherin (HMM E-Value=0) 29 5.4
SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05) 29 5.4
SB_48962| Best HMM Match : Cadherin (HMM E-Value=0) 28 7.1
SB_3579| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_2351| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-07) 28 7.1
SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20) 28 7.1
SB_59124| Best HMM Match : Bac_luciferase (HMM E-Value=1.6) 28 7.1
SB_54652| Best HMM Match : Retrotrans_gag (HMM E-Value=0.52) 28 7.1
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_20407| Best HMM Match : ResIII (HMM E-Value=0.36) 28 7.1
SB_16968| Best HMM Match : Laminin_EGF (HMM E-Value=0) 28 7.1
SB_52909| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_49127| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_31319| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_26932| Best HMM Match : rve (HMM E-Value=3.2) 28 9.4
SB_55657| Best HMM Match : EGF_CA (HMM E-Value=0) 28 9.4
SB_54959| Best HMM Match : TatC (HMM E-Value=0.44) 28 9.4
SB_47789| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-34) 28 9.4
SB_39739| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 28 9.4
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 28 9.4
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Frame = +1
Query: 538 CDDCKCDETGK----CDKPE-CLCIPT-EGKPCICLCSDDKGNIKVCDDCSCTPAQSKEL 699
C C CD +G C+ C C P G+ C G C C+C A S
Sbjct: 822 CSPCNCDASGSLATNCNSTGYCQCKPNIGGRRCDRCMPGSYGGPGSCKPCNCNMAGSLSD 881
Query: 700 KCDKSG-CICVP-TEGKSC 750
CD SG C C P +G C
Sbjct: 882 TCDDSGKCNCKPNVQGDKC 900
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Frame = +2
Query: 281 DESPHAESNFNCTVFNKKMACKTNICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCD 460
D S +N N T + + CK NI R C C+C A S CD
Sbjct: 828 DASGSLATNCNSTGYCQ---CKPNIGGRRCDRCMPGSYGGPGSCKPCNCNMAGSLSDTCD 884
Query: 461 KSG-CICVP-TEGKPC 502
SG C C P +G C
Sbjct: 885 DSGKCNCKPNVQGDKC 900
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Frame = +1
Query: 538 CDDCKCDETGK----CDKP-ECLCIPT-EGKPCICLCSDDKGNIKVCDDCSCT 678
C C C+ G CD +C C P +G C C D N++V +D C+
Sbjct: 868 CKPCNCNMAGSLSDTCDDSGKCNCKPNVQGDKCDT-CKDGTQNLQVNNDFGCS 919
>SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 546
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
Frame = +1
Query: 547 CKCDETGK----CDKP--ECLC-IPTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKC 705
C C+ G CD+ C C GK C LC N C C C P +K+ C
Sbjct: 2 CNCNPEGATNLVCDQSTGRCPCRTRIRGKKCD-LCPLGHFNFPRCKGCDCDPLTTKDEIC 60
Query: 706 DKSG-CICVPT-EGKSC 750
D +G C+C +G C
Sbjct: 61 DNTGSCVCKDNFQGHRC 77
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +2
Query: 287 SPHAESNFNCTVFNKKMACKTNICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCDKS 466
+P +N C + C+T I + + N C C C P +K+ CD +
Sbjct: 5 NPEGATNLVCDQSTGRCPCRTRI-RGKKCDLCPLGHFNFPRCKGCDCDPLTTKDEICDNT 63
Query: 467 G-CIC 478
G C+C
Sbjct: 64 GSCVC 68
>SB_8046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 36.3 bits (80), Expect = 0.027
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 9/79 (11%)
Frame = +1
Query: 532 LRCDDCKCDETGK----C--DKPECLCIPTEGKPCICLCSDDKGNIKV---CDDCSCTPA 684
L C C C+ TG C D +C C P+ + C D N C C C
Sbjct: 741 LGCKACACNMTGSKRSSCHPDTGKCECHPSITERQCSRCLDHYFNFTSGVGCQPCGCNEL 800
Query: 685 QSKELKCDKSGCICVPTEG 741
S++L+CD +C +G
Sbjct: 801 YSRDLQCDNDTGVCSCKDG 819
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 410 CNDCSCTPAQSKELKCDKSGCICVPTEG 493
C C C S++L+CD +C +G
Sbjct: 792 CQPCGCNELYSRDLQCDNDTGVCSCKDG 819
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 35.9 bits (79), Expect = 0.035
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 10/76 (13%)
Frame = +1
Query: 529 LLRCDDCKCDETG------KCDKP--ECLCIPTE-GKPCICLCSDDKGNIKVCDDCSCTP 681
+L C DCKCD G C+ +C C P+ G+ C C+ C C C
Sbjct: 721 ILGCQDCKCDRFGVAGGNIACNPKTGQCPCKPSHTGRRC-DQCAVGYHGYPYCQQCDCDA 779
Query: 682 AQSKELKCDKSG-CIC 726
CD +G C+C
Sbjct: 780 RGVNGSVCDSTGRCLC 795
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Frame = +2
Query: 284 ESPHAESNFNCTVFNKKMACKTNICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCDK 463
+S +AE CT + CK +RK + C+ C+C S + KCD
Sbjct: 41 DSQNAEVTGKCTCKEYVTGTRCTTCKVGFYALQERK---VFGCSGCACDVGGSFDQKCDS 97
Query: 464 --SGCICVP-TEGKPCVCF 511
C C P G+ C F
Sbjct: 98 ITGQCKCRPNVRGRDCSRF 116
Score = 28.3 bits (60), Expect = 7.1
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Frame = +1
Query: 532 LRCDDCKCDETG---KCD--KPECLCIP-TEGKPCICLCSDDKGNIK--VCDDCSCTPAQ 687
L C+DC+C E C+ +CLC P G+ C C N K C C+C P
Sbjct: 1272 LGCEDCECAEASLGQSCNVRTGQCLCKPGATGRRCE-RCKAGFWNYKNTGCQACNC-PGG 1329
Query: 688 SKEL--KCD-KSGCICVPTEGKSC 750
+ L CD +G C P G +C
Sbjct: 1330 PENLWGFCDVNTGQCCKP--GGNC 1351
>SB_2315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +1
Query: 532 LRCDDCKCDETGKCDKPECLCIPTEGKPCICL-CSDDKGNIKVCDDCSCTPAQSKELKCD 708
+RCD +CD +CD C + + C + C + + CD C + ++CD
Sbjct: 6 MRCDAMRCDAM-RCDAMRCDAMLCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCD 64
Query: 709 KSGCICVPTEGKSC 750
C + + C
Sbjct: 65 AMRCDAMRCDAMRC 78
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +1
Query: 532 LRCDDCKCDETGKCDKPECLCIPTEGKPCICL-CSDDKGNIKVCDDCSCTPAQSKELKCD 708
+RCD +CD +CD C + + C + C + + CD C + ++CD
Sbjct: 11 MRCDAMRCDAM-RCDAMLCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCD 69
Query: 709 KSGCICVPTEGKSC 750
C + + C
Sbjct: 70 AMRCDAMRCDAMRC 83
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +1
Query: 532 LRCDDCKCDETGKCDKPECLCIPTEGKPCICL-CSDDKGNIKVCDDCSCTPAQSKELKCD 708
+RCD +CD CD C + + C + C + + CD C + ++CD
Sbjct: 16 MRCDAMRCDAM-LCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCD 74
Query: 709 KSGCICVPTEGKSC 750
C + + C
Sbjct: 75 AMRCDAMRCDAMRC 88
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +1
Query: 532 LRCDDCKCDETGKCDKPECLCIPTEGKPCICL-CSDDKGNIKVCDDCSCTPAQSKELKCD 708
+RCD CD +CD C + + C + C + + CD C + ++CD
Sbjct: 21 MRCDAMLCDAM-RCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCD 79
Query: 709 KSGCICVPTEGKSC 750
C + + C
Sbjct: 80 AMRCDAMRCDAMRC 93
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Frame = +1
Query: 538 CDDCKCDETGKCDKPECLCIPTEGKPCICL-CSDDKGNIKVCDDCSCTPAQSKELKCDKS 714
CD +CD +CD C + + C + C + + CD C + ++CD
Sbjct: 28 CDAMRCDAM-RCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCDAMRCDAM 86
Query: 715 GCICVPTEGKSC 750
C + + C
Sbjct: 87 RCDAMRCDAMRC 98
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/72 (26%), Positives = 25/72 (34%), Gaps = 4/72 (5%)
Frame = +1
Query: 547 CKCDETGKCD--KPECLCIP-TEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSG 717
C+C G+CD C C P G C C + C+C +
Sbjct: 419 CQCSRNGECDAASGRCACAPGFTGDRCESRCPKGYYGTNCSNACTCKATNTNVCDVTSGF 478
Query: 718 CICVP-TEGKSC 750
C C P G+SC
Sbjct: 479 CHCNPGWSGRSC 490
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Frame = +1
Query: 547 CKCDETGKCDK--PECLCIP-TEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSG 717
C C E G CD +C C+P G CI C + C C S + +
Sbjct: 183 CTCSEYGSCDSRTGKCHCMPGYSGPTCIDECPTGYYGYECTQKCQCVNGASCDRRTGSCN 242
Query: 718 CICVPTEGKSC 750
C V GK C
Sbjct: 243 C-TVGWIGKFC 252
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +1
Query: 547 CKCDETGKCDKP--ECLCIP-TEGKPCICLCSDDKGNIKVCDDCSCTP 681
C C+ KCD+ C C P EG C C + + C C P
Sbjct: 912 CLCENGAKCDRKTGACTCAPGFEGLRCSRPCLEGRYGGNCTKICDCNP 959
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +1
Query: 586 CLCIPT-EGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSGCICVP-TEGKSCI 753
C C P G C C D + I C+C+ S + + K C C+P G +CI
Sbjct: 155 CACAPGFHGNTCQLPCPDGQWGIDCKGVCTCSEYGSCDSRTGK--CHCMPGYSGPTCI 210
>SB_19405| Best HMM Match : DMP1 (HMM E-Value=3.8)
Length = 551
Score = 33.5 bits (73), Expect = 0.19
Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 5/110 (4%)
Frame = +2
Query: 314 CTVFNKKMACKT--NICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCDKS---GCIC 478
CT NK C T N + + E + +CN + C ++S+ KC+ S C
Sbjct: 257 CTSSNKSNKCNTSENRSNKCNTRESRSNKCNTRENRSNKCNTSESRSNKCNTSENRSNKC 316
Query: 479 VPTEGKPCVCFVRKMESSFAVTTASVMKLANVINRNVSVYRLKENLVFAC 628
E + C R+ S+ T+ + N + +EN C
Sbjct: 317 NTRESRSNKCKTRENRSNKCNTSENRSNKCNTRENRSNKCNTRENRSNKC 366
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/103 (18%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
Frame = +2
Query: 329 KKMACKTNICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCDKS---GCICVPTEGKP 499
++M +N + + E++ +CN + C +++ KC+ S C +E +
Sbjct: 254 QEMCTSSNKSNKCNTSENRSNKCNTRESRSNKCNTRENRSNKCNTSESRSNKCNTSENRS 313
Query: 500 CVCFVRKMESSFAVTTASVMKLANVINRNVSVYRLKENLVFAC 628
C R+ S+ T + N + +EN C
Sbjct: 314 NKCNTRESRSNKCKTRENRSNKCNTSENRSNKCNTRENRSNKC 356
Score = 28.3 bits (60), Expect = 7.1
Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 5/116 (4%)
Frame = +2
Query: 296 AESNFNCTVFNKKMACKT--NICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCDKS- 466
+ SN T N+ C T N + + E++ +CN + C +S+ KC+ S
Sbjct: 321 SRSNKCKTRENRSNKCNTSENRSNKCNTRENRSNKCNTRENRSNKCNTRESRSNKCNTSE 380
Query: 467 --GCICVPTEGKPCVCFVRKMESSFAVTTASVMKLANVINRNVSVYRLKENLVFAC 628
C E + C R+ S+ T+ S N + EN C
Sbjct: 381 NRSNKCNTGENRSNKCNTRENRSNKCNTSESRSNKCNTSESRSNKCNTSENRSNKC 436
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +2
Query: 296 AESNFNCTVFNKKMACKT--NICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCDKS 466
+ SN T N+ C T N + + E++ +CN + C ++S+ KC+ S
Sbjct: 421 SRSNKCNTSENRSNKCNTSENRSNKCNTSENRSNKCNTRENRSNKCNTSESRSNKCNTS 479
Score = 27.9 bits (59), Expect = 9.4
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Frame = +2
Query: 302 SNFNCTVFNKKMACKT--NICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCDKS--- 466
SN T N+ C T N + + E + +CN C ++S+ KC+ S
Sbjct: 443 SNKCNTSENRSNKCNTRENRSNKCNTSESRSNKCNTSESRSNKCNTSESRSNKCNTSESR 502
Query: 467 GCICVPTEGKPCVCFVRKMESSFAVTTASVMKL 565
C +E + C + S+ T+ S K+
Sbjct: 503 SNKCNTSESRSNKCNTSENRSNKCNTSESPSKI 535
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Frame = +2
Query: 278 TDESPHAESNFNCTVFNKKMACKTNICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKC 457
T E +FNC + +C C +T Q K C C+ + + C
Sbjct: 180 TQECKTGSCSFNCAAQTCESSCAHGSCPNMTCGGTNCTQKCGKDCQQVVCSASGKCDQSC 239
Query: 458 DKSGCICVPTEG-KPC 502
D GC +EG K C
Sbjct: 240 DGEGCNLYCSEGAKTC 255
Score = 31.9 bits (69), Expect = 0.57
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +1
Query: 544 DCKCDETGKCDKPECLCIPTEGKPCICLCSDDKGNI---KVCDDCSCTPAQSKELKCDKS 714
DCK +CD C T+G+ C D+ K C +CT A+S EL C
Sbjct: 303 DCKM----RCDAKVCTSKCTDGRCQAISCGGDRCTQECGKNCTSMACT-AKSCELSCPGG 357
Query: 715 GCI 723
GCI
Sbjct: 358 GCI 360
>SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23)
Length = 198
Score = 33.5 bits (73), Expect = 0.19
Identities = 30/87 (34%), Positives = 36/87 (41%), Gaps = 15/87 (17%)
Frame = +1
Query: 535 RCDDCKCDE------TGKCDKP--ECL-CI-PTEGKPCICLCSDDKGNI--KVCDDCSCT 678
+C C C+ TG C+ ECL C+ T G C S GN K C C+CT
Sbjct: 74 QCRKCNCNGNVDPGVTGNCNTTTGECLKCLYNTSGFNCQWCVSGFHGNATAKTCQACNCT 133
Query: 679 PAQSKELKCDK--SGCICVP-TEGKSC 750
SK C+ C C P G SC
Sbjct: 134 DRGSKHGVCNNVTGQCDCHPLVTGLSC 160
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 10/67 (14%)
Frame = +1
Query: 538 CDDCKCDETGK----CDKP--ECLCIP-TEGKPCICLCSDDKGNI---KVCDDCSCTPAQ 687
C C C + G C+ +C C P G C C D N K C C C P
Sbjct: 127 CQACNCTDRGSKHGVCNNVTGQCDCHPLVTGLSCE-RCVKDAFNYTSGKGCTACGCHPQG 185
Query: 688 SKELKCD 708
S + +CD
Sbjct: 186 SNDTQCD 192
>SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 587
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +2
Query: 290 PHAESNFNCTVFNKKMACKTNICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCDKSG 469
P + +C+ F + C+ N+ R + C C C+P S CD +G
Sbjct: 345 PKGALDASCSKFGGQCTCRRNVVGR-KCDRCMASYTGFPNCRKCECSPVGSVSPDCDVTG 403
Query: 470 -CIC 478
C C
Sbjct: 404 HCTC 407
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 8/68 (11%)
Frame = +1
Query: 547 CKCDETG----KCDK--PECLCIPTE-GKPCICLCSDDKGNIKVCDDCSCTPAQSKELKC 705
C+CD G C K +C C G+ C C C C C+P S C
Sbjct: 341 CECDPKGALDASCSKFGGQCTCRRNVVGRKCD-RCMASYTGFPNCRKCECSPVGSVSPDC 399
Query: 706 DKSG-CIC 726
D +G C C
Sbjct: 400 DVTGHCTC 407
>SB_9510| Best HMM Match : Keratin_B2 (HMM E-Value=3.8e-05)
Length = 500
Score = 32.3 bits (70), Expect = 0.43
Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = +1
Query: 511 CKEDG-KLLRCDDCKCDETGKCDKPECLCIPTEGKPCICL-CSDDKGNIKVCDDCSCTPA 684
CK+ G K C D C + G C C + C C D C D C A
Sbjct: 351 CKDAGCKDAACKDAGCKDAG-CKDAGCKDAGCKDAGCKDAGCKDAGCKDAACKDAGCKDA 409
Query: 685 QSKELKCDKSGC 720
K+ C +GC
Sbjct: 410 GCKDAGCKDAGC 421
Score = 32.3 bits (70), Expect = 0.43
Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = +1
Query: 511 CKEDG-KLLRCDDCKCDETGKCDKPECLCIPTEGKPCICL-CSDDKGNIKVCDDCSCTPA 684
CK+ G K C D C + G C C + C C D C D C A
Sbjct: 416 CKDAGCKDAGCKDAGCKDAG-CKDAGCKDAACKDAGCKDAGCKDAGCKDAACKDAGCKDA 474
Query: 685 QSKELKCDKSGC 720
K+ C +GC
Sbjct: 475 GCKDAGCKDAGC 486
Score = 31.9 bits (69), Expect = 0.57
Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = +1
Query: 511 CKEDG-KLLRCDDCKCDETGKCDKPECLCIPTEGKPCI-CLCSDDKGNIKVCDDCSCTPA 684
CK+ G K C D C + G C C + C C D C D C A
Sbjct: 361 CKDAGCKDAGCKDAGCKDAG-CKDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDA 419
Query: 685 QSKELKCDKSGC 720
K+ C +GC
Sbjct: 420 GCKDAGCKDAGC 431
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = +1
Query: 511 CKEDG-KLLRCDDCKCDETGKCDKPECLCIPTEGKPCICL-CSDDKGNIKVCDDCSCTPA 684
CK+ G K C D C + G C C + C C D C D C A
Sbjct: 421 CKDAGCKDAGCKDAGCKDAG-CKDAACKDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDA 479
Query: 685 QSKELKCDKSGC 720
K+ C +GC
Sbjct: 480 GCKDAGCKDAGC 491
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = +1
Query: 511 CKEDG-KLLRCDDCKCDETGKCDKPECLCIPTEGKPCICL-CSDDKGNIKVCDDCSCTPA 684
CK+ G K C D C + G C C + C C D C D C A
Sbjct: 366 CKDAGCKDAGCKDAGCKDAG-CKDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDAGCKDA 424
Query: 685 QSKELKCDKSGC 720
K+ C +GC
Sbjct: 425 GCKDAGCKDAGC 436
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = +1
Query: 511 CKEDG-KLLRCDDCKCDETGKCDKPECLCIPTEGKPCICL-CSDDKGNIKVCDDCSCTPA 684
CK+ G K C D C + G C C + C C D C D C A
Sbjct: 371 CKDAGCKDAGCKDAGCKDAG-CKDAGCKDAACKDAGCKDAGCKDAGCKDAGCKDAGCKDA 429
Query: 685 QSKELKCDKSGC 720
K+ C +GC
Sbjct: 430 GCKDAGCKDAGC 441
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = +1
Query: 511 CKEDG-KLLRCDDCKCDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDCSCTPAQ 687
CK+ G K C D C + G C C + C D G C D C A
Sbjct: 431 CKDAGCKDAGCKDAACKDAG-CKDAGCKDAGCKDAACKDAGCKDAG----CKDAGCKDAG 485
Query: 688 SKELKCDKSGC 720
K+ C +GC
Sbjct: 486 CKDAGCKDAGC 496
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 329 KKMACKTNICKRLTSEEDQRKQ--CNIKVCNDCSCTPAQSKELKCDKSGC 472
K CK CK ++ K C C D C A K+ C +GC
Sbjct: 437 KDAGCKDAACKDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDAGC 486
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = +2
Query: 329 KKMACKTNICKRLTSEEDQRKQ--CNIKVCNDCSCTPAQSKELKCDKSGC 472
K ACK CK ++ K C C D C A K+ C +GC
Sbjct: 442 KDAACKDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDAGCKDAGC 491
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 329 KKMACKTNICKRLTSEEDQRKQ--CNIKVCNDCSCTPAQSKELKCDKSGC 472
K CK CK ++ K C C D C A K+ C +GC
Sbjct: 332 KDAGCKDAGCKDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDAGC 381
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 329 KKMACKTNICKRLTSEEDQRKQ--CNIKVCNDCSCTPAQSKELKCDKSGC 472
K CK CK ++ K C C D C A K+ C +GC
Sbjct: 372 KDAGCKDAGCKDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDAGC 421
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 329 KKMACKTNICKRLTSEEDQRKQ--CNIKVCNDCSCTPAQSKELKCDKSGC 472
K CK CK ++ K C C D C A K+ C +GC
Sbjct: 347 KDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDAGCKDAGCKDAGCKDAGC 396
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 329 KKMACKTNICKRLTSEEDQRKQ--CNIKVCNDCSCTPAQSKELKCDKSGC 472
K CK CK ++ K C C D C A K+ C +GC
Sbjct: 342 KDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDAGCKDAGCKDAGC 391
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 329 KKMACKTNICKRLTSEEDQRKQ--CNIKVCNDCSCTPAQSKELKCDKSGC 472
K CK CK ++ K C C D C A K+ C +GC
Sbjct: 402 KDAGCKDAGCKDAGCKDAGCKDAGCKDAGCKDAGCKDAGCKDAACKDAGC 451
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 329 KKMACKTNICKRLTSEEDQRKQ--CNIKVCNDCSCTPAQSKELKCDKSGC 472
K CK CK ++ K C C D C A K+ C +GC
Sbjct: 407 KDAGCKDAGCKDAGCKDAGCKDAGCKDAGCKDAGCKDAACKDAGCKDAGC 456
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = +2
Query: 329 KKMACKTNICKRLTSEEDQRKQ--CNIKVCNDCSCTPAQSKELKCDKSGC 472
K CK CK ++ K C C D +C A K+ C +GC
Sbjct: 412 KDAGCKDAGCKDAGCKDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAGC 461
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 329 KKMACKTNICKRLTSEEDQRKQ--CNIKVCNDCSCTPAQSKELKCDKSGC 472
K CK CK ++ K C C D C A K+ C +GC
Sbjct: 447 KDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDAGCKDAGCKDAGC 496
>SB_10244| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 205
Score = 31.9 bits (69), Expect = 0.57
Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
Frame = +1
Query: 538 CDDCKCDETGK----CDKP--ECLC-IPTEGKPCI-CLCSDDKGNIKVCDDCSCTPAQSK 693
C C C+ G CD +C C G+ C C S C +C+C S
Sbjct: 108 CRPCDCNVNGSSSSLCDHVTGQCSCKANVVGRDCSRCKVSSYGFGPAGCTECACNVHGSA 167
Query: 694 ELKCDKSG-CIC 726
L+CD SG C C
Sbjct: 168 SLQCDDSGVCPC 179
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 281 DESPHAESNFNCTVFNKKMACKTNICKRLTSE-EDQRKQCNIKVCNDCSCTPAQSKELKC 457
D + + S+ C + +CK N+ R S + C +C+C S L+C
Sbjct: 112 DCNVNGSSSSLCDHVTGQCSCKANVVGRDCSRCKVSSYGFGPAGCTECACNVHGSASLQC 171
Query: 458 DKSG-CIC 478
D SG C C
Sbjct: 172 DDSGVCPC 179
>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
Length = 300
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 547 CKCDETGKCDKPECLCIPTEGKPCI-CLCSDDKGNIKVCDDCSC 675
CKC + CDK + C G I C CS K K CSC
Sbjct: 232 CKCQKNATCDKIDGTCQCKPGWTGIDCECSPGKYGNKCEKTCSC 275
>SB_5218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +2
Query: 341 CKTNICKRLTSEEDQ--RKQCNIKVCNDCSCTPAQSKELKCDKSGCICVPTEGKPCVCFV 514
C T C Q +CN CN C AQ +C+ + C C T+ C
Sbjct: 247 CNTTHCNTTQGNTAQCNTTECNTAQCNTTQCNTAQCNTTQCNTTQC-CNTTQCNTTQCNK 305
Query: 515 RKMESSFAVTTASV 556
+ + + VT SV
Sbjct: 306 HSV-TQYRVTEHSV 318
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 3/96 (3%)
Frame = +2
Query: 341 CKTNICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCDKSGC---ICVPTEGKPCVCF 511
C T C L + QCN CN C Q +C+ + C C T+ C
Sbjct: 227 CNTIQCNTL---QGNTTQCNTTQCNTTHCNTTQGNTAQCNTTECNTAQCNTTQCNTAQCN 283
Query: 512 VRKMESSFAVTTASVMKLANVINRNVSVYRLKENLV 619
+ ++ T +V+ YR+ E+ V
Sbjct: 284 TTQCNTTQCCNTTQ-CNTTQCNKHSVTQYRVTEHSV 318
>SB_33333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 356 CKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCDKSGCICVPTEG 493
C+ ++ + +IKVC C+C P S+ C++S C EG
Sbjct: 366 CREGFYKDPNKHITHIKVCRQCNCHPHGSRGRVCNQSTGQCPCKEG 411
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 646 NIKVCDDCSCTPAQSKELKCDKSGCICVPTEG 741
+IKVC C+C P S+ C++S C EG
Sbjct: 380 HIKVCRQCNCHPHGSRGRVCNQSTGQCPCKEG 411
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 508 LCKEDGKLLRCDDCKCDETGKCDKPECLCIPTEGKPC 618
+CK+ G+LL CD C KC P + +PT C
Sbjct: 454 VCKDGGQLLCCDKCPMAYHLKCLIPPMMRVPTGEWKC 490
>SB_36593| Best HMM Match : PHD (HMM E-Value=3.4e-18)
Length = 134
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 508 LCKEDGKLLRCDDCKCDETGKCDKPECLCIPTEGKPC 618
+CK+ G+LL CD C KC P + +PT C
Sbjct: 16 VCKDGGQLLCCDKCPMAYHLKCLIPPMMRVPTGEWKC 52
>SB_34555| Best HMM Match : EGF (HMM E-Value=7.00649e-45)
Length = 979
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Frame = +1
Query: 526 KLLRCDDCKCDETGKC-DKPE-----CLCIPTEGKPCICLCSDDKGNIKVCDDCSCTPAQ 687
K+ RCD C G C +KP+ C C P+E C + ++ CD C
Sbjct: 209 KVQRCDSSPCKNGGSCTNKPDNTGYTCTC-PSEYTGTEC-----ETQVQPCDSSPCKNGG 262
Query: 688 SKELKCDKSGCIC 726
+ K D SG C
Sbjct: 263 ACANKADNSGYTC 275
>SB_24569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1660
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 532 LRCDDCKCDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDCSC-TPAQSKELKCD 708
LRC DC +T DK C C P K D G +C+ CS + ++ D
Sbjct: 43 LRCVDCGSGQTQSDDKLSCNCRPGFKK-----TKSDGGPNLLCESCSTGSGGVNRTASLD 97
Query: 709 KSGCICVPTE 738
C+ P +
Sbjct: 98 GWSCVLCPND 107
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Frame = +1
Query: 538 CDDCKCDETGKCDKPECLCIPTEGKPCIC-LCSDDKGNIKVCDDCSCTPAQSKELKCDKS 714
C D C E G C + C+ P PC+ C D C D SC + + C S
Sbjct: 459 CIDGPCVE-GPCVESPCVDGPCVDSPCVDGPCVDAPCVDSPCVDGSCVESPCVDGPCVDS 517
Query: 715 GCICVPTEGKSCI 753
C+ P CI
Sbjct: 518 PCVDGPCVDGPCI 530
>SB_17752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 513
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Frame = +1
Query: 538 CDDCKCDETGKCDKPECLCIPTEGKPCIC-LCSDDKGNIKVCDDCSCTPAQSKELKCDKS 714
C D C E G C + C+ P PC+ C D C D SC + + C S
Sbjct: 150 CIDGPCVE-GPCVESPCVDGPCVDSPCVDGPCVDAPCVDSPCVDGSCVESPCVDGPCVDS 208
Query: 715 GCICVPTEGKSCI 753
C+ P CI
Sbjct: 209 PCVDGPCVDGPCI 221
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 329 KKMACKTNICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCDKSGCIC 478
K AC+TN ++ + D C++ DCS P S E DK C+C
Sbjct: 1535 KYQACRTNSALKVKRKGD----CDVCKDFDCSSAPYSSCEAVNDKPICVC 1580
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 640 KGNIKVCD--DCSCTPAQSKELKCDKSGCIC 726
KG+ VC DCS P S E DK C+C
Sbjct: 1550 KGDCDVCKDFDCSSAPYSSCEAVNDKPICVC 1580
>SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 683
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
Frame = +1
Query: 535 RCDDCKCDETGK----CDKP--ECLCIPTE-GKPCI-CLCSDDKGNIKVCDDCSCTPAQS 690
+C C C+ G CD +C C G+ C C + C +C+C S
Sbjct: 149 QCKACDCNVNGSSSSLCDHVTGQCSCKENVVGRDCSRCKVNSYGFGPAGCTECACNVHGS 208
Query: 691 KELKCDKSG-CIC 726
L+CD SG C C
Sbjct: 209 ASLQCDDSGVCPC 221
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 281 DESPHAESNFNCTVFNKKMACKTNICKRLTSE-EDQRKQCNIKVCNDCSCTPAQSKELKC 457
D + + S+ C + +CK N+ R S + C +C+C S L+C
Sbjct: 154 DCNVNGSSSSLCDHVTGQCSCKENVVGRDCSRCKVNSYGFGPAGCTECACNVHGSASLQC 213
Query: 458 DKSG-CIC 478
D SG C C
Sbjct: 214 DDSGVCPC 221
>SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05)
Length = 117
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +1
Query: 541 DDCK-CDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSG 717
DDC C KC K EC+C + G+ C +C SK KC +
Sbjct: 5 DDCNGCHHNAKCVKKECIC-----------KAGFSGDGTTCRVDNCVNGCSKHGKCIRGF 53
Query: 718 CIC 726
CIC
Sbjct: 54 CIC 56
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 511 CKEDGKLLRCDDCKCDE-TGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDCSCTPAQ 687
C E C D +E TG + +C +GK ++KG +CD +
Sbjct: 2028 CHESPGQCWCVDVHGNELTGTRAFGQVVCSTRDGKTTCQKEQEEKGISDLCD----SNGG 2083
Query: 688 SKELKCDKSGCICVPTEGK 744
K L+C+K C CV GK
Sbjct: 2084 FKPLQCEKPYCWCVDRNGK 2102
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = +1
Query: 541 DDCK----CDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDCSCTPAQS 690
+DCK C++ +CD + +C TEG C C G D +CTP S
Sbjct: 870 EDCKDINECEQNHECDPLKAVCTNTEGS-YSCTCRPGYGG----DGRTCTPISS 918
>SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 3312
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Frame = +1
Query: 511 CKEDGKLLRCDDCKCDETGKCD----KPECLCIPTEGK-PCIC----LCSDDKGNIKVCD 663
C+E G LLR D C++ +CD K E C T G C C +DDK + K C
Sbjct: 564 CRE-GFLLRQDGKTCEDIDECDTGLHKCEHQCNNTFGSYSCSCSPGFALADDKKSCKACK 622
Query: 664 D 666
D
Sbjct: 623 D 623
>SB_38444| Best HMM Match : TMS_TDE (HMM E-Value=0)
Length = 1031
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = -2
Query: 669 AIIAYLYITFV------IATQANTRFSFSRYTETFRFITFASFITLAVVTAKEL 526
A+IA +Y+T+ I+ Q RF F RY +T+ F F + + ++ K L
Sbjct: 179 AVIAIIYLTWFYAFDLDISRQGGRRFEFFRYLKTWHF--FRDYFPIKLIRTKRL 230
>SB_30961| Best HMM Match : I-set (HMM E-Value=0)
Length = 1018
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -2
Query: 507 QTHGFPSVGTQMQPDLSHFSSLD*AGVHEQSLHTLILHCL 388
QTHG +V Q +PD S S D A ++E TL+L CL
Sbjct: 570 QTHGNTTVDIQYKPDDSRLSIHDIAVINE----TLVLKCL 605
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 5/53 (9%)
Frame = +1
Query: 532 LRCDDCKCDETGKCDKP-ECLCIPTEGKPCICLCSDDKGNIKVC----DDCSC 675
L+CD C KCD+ C C C +C+ C D C C
Sbjct: 370 LKCDCLSCTRAAKCDRELTCTCNKKWEGSCNAICTRTSNATSSCVTLGDQCHC 422
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = +1
Query: 493 KAMRLLCKED--GKLLRCDDC-KCDETGKCDKPECLCIPTEGK-PCIC 624
+ + +CK G + C+D +CD CDK CI T G C C
Sbjct: 455 RRLECVCKSGYHGDGVTCEDIDECDIAHHCDKLHATCINTPGSHTCRC 502
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Frame = +1
Query: 586 CLCIPTEGKPCI---CLCSDD-KGNIKVCDDCSCTPAQSKELKCDKSGCICVPT-EGKSC 750
CL G CI C+C+ GN C++ C P C+ CIC GKSC
Sbjct: 274 CLYPCMNGGSCINGKCVCAVGFTGN--TCEERLCDPPCQNSGTCNNGTCICTKQYTGKSC 331
>SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 512
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +2
Query: 374 EEDQRKQCNIKVCNDCS--CTPAQSKELKCDKSGCICVPTEGKPCVCFVRKMESSFAVTT 547
++ ++++CN D C S+ ++C K CI VP E K + E +A
Sbjct: 351 DQVRKRKCNSPKPKDGGDKCPGLNSESIECPKENCIDVPKEDKFSKEIEKDSELYYACGE 410
Query: 548 ASVMKLANVINRNVSVYRLKEN 613
+++ + V V EN
Sbjct: 411 GKAFRVSKSQDETVQVILNDEN 432
>SB_28272| Best HMM Match : EGF (HMM E-Value=2.6e-15)
Length = 157
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 4/94 (4%)
Frame = +1
Query: 472 HLCTD*RKAMRLLCKEDGKLLRCDDCKCDETGKCDKPECLCIPTEGKPCICLC----SDD 639
H C +++ C ++ CD C C E G C C SD
Sbjct: 58 HRCECPKESSSGTCANSARVKPCDSSPCQNNATCTNKE----DNSGYNCTCSTGFTGSDC 113
Query: 640 KGNIKVCDDCSCTPAQSKELKCDKSGCICVPTEG 741
+ +K C C + K + SG C + G
Sbjct: 114 ETQVKPCGSSPCKNNSTCTNKDENSGYDCTCSTG 147
>SB_39250| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 468
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +2
Query: 374 EEDQRKQCNIKVCNDCS--CTPAQSKELKCDKSGCICVPTEGKPCVCFVRKMESSFAVTT 547
++ ++++CN D C S+ ++C K CI VP E K + E +A
Sbjct: 307 DQVRKRKCNSPKPKDGGDKCPGLNSESIECPKENCIDVPKEDKFSKEIEKDSELYYACGE 366
Query: 548 ASVMKLANVINRNVSVYRLKEN 613
+++ + V V EN
Sbjct: 367 GKAFRVSKSQDETVQVILNDEN 388
>SB_38090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +1
Query: 553 CDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVC 660
C + + P C C+ E +C C ++ N VC
Sbjct: 11 CCMKNEDNAPVCCCMKNEDNAAVCCCMKNEDNAPVC 46
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +1
Query: 553 CDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVC 660
C + + P C C+ E +C C ++ N VC
Sbjct: 179 CCMKNEDNAPVCCCMKNEDNAAVCCCMKNEDNAPVC 214
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +1
Query: 553 CDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVC 660
C + + P C C+ E +C C ++ N VC
Sbjct: 131 CCMKNEDNAPICCCMKNEDNAAVCCCMKNEDNAPVC 166
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +1
Query: 553 CDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVC 660
C + + P C C+ E IC C ++ N VC
Sbjct: 119 CCMKNEDNAPVCCCMKNEDNAPICCCMKNEDNAAVC 154
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +1
Query: 553 CDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVC 660
C + + P C C+ E +C C ++ N VC
Sbjct: 155 CCMKNEDNAPVCFCMKNEDNAPVCCCMKNEDNAPVC 190
>SB_37171| Best HMM Match : EGF (HMM E-Value=2.6e-15)
Length = 186
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 4/94 (4%)
Frame = +1
Query: 472 HLCTD*RKAMRLLCKEDGKLLRCDDCKCDETGKCDKPECLCIPTEGKPCICLC----SDD 639
H C +++ C ++ CD C C E G C C SD
Sbjct: 58 HRCECPKESSSGTCANSARVKPCDSSPCQNNATCTNKE----DNSGYNCTCSTGFTGSDC 113
Query: 640 KGNIKVCDDCSCTPAQSKELKCDKSGCICVPTEG 741
+ +K C C + K + SG C + G
Sbjct: 114 ETQVKPCGSSPCKNNSTCTNKDENSGYDCTCSTG 147
>SB_52925| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 393
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +1
Query: 550 KCDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELK 702
KCDE GK C C P K + S K + CD+C QSK L+
Sbjct: 257 KCDECGK-----CFCRPDNLKEHLITHSGQKPH--KCDECGKCFTQSKSLR 300
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/74 (27%), Positives = 30/74 (40%)
Frame = +1
Query: 529 LLRCDDCKCDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCD 708
LL CD C C C+ G C C+C G + CD+C ++ LKC
Sbjct: 1173 LLLCDGCDRGYHTYC------CMAAGGDNC-CVCGGPAGKMAKCDNC----PRNFHLKCL 1221
Query: 709 KSGCICVPTEGKSC 750
+ + +P +C
Sbjct: 1222 EPPLVKMPRVSWTC 1235
>SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1712
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Frame = +1
Query: 511 CKEDGKLLRCDDCK-CDETGKCDKPECLCIPTEGKPCI---CLCSDDKGNIKVCDDCSCT 678
C G L+ DD K C E C KP + + CI C D+ C
Sbjct: 1286 CSCTGSLVLQDDEKNCGEPSTC-KPNYISCASMKAICIPKMWRCDGMLDCTDKSDEEDCP 1344
Query: 679 PAQSKELKCDKSGCI 723
P + + +CD CI
Sbjct: 1345 PCKENQFRCDNGQCI 1359
>SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14)
Length = 635
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +1
Query: 553 CDE-TGKCDKPECLCIPTEGKPC--ICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSG 717
CD TG+CD+ C + T G C +C C+D + V +C+C A S C +G
Sbjct: 237 CDHVTGRCDQ-RCP-VGTYGFDCAKVCACADTEKCSVVSGECTCI-AGSCSSSCPCAG 291
>SB_14427| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2325
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +1
Query: 553 CDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSGCIC-V 729
CDE +C C G C L ++ CDD C P +K ++ C C +
Sbjct: 2199 CDEINECISNPC----RPGGECTDLVNNYTCAY-FCDDDPCVPGTTKFCSDEERACFCKL 2253
Query: 730 PTEGKSC 750
+G++C
Sbjct: 2254 GFDGRNC 2260
>SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05)
Length = 770
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +2
Query: 281 DESPHAESNFNCTVFNKKMACKTNICKRLTSEEDQRKQCNIKVCNDCSCTPAQSK 445
D S H S F T+ AC+ K L EE + +C I C+CT A K
Sbjct: 329 DNSCH--SRFGQTLLELSKACQE--AKELLDEEQRAIRCKIGCPARCTCTQASLK 379
>SB_48962| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2225
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Frame = +1
Query: 553 CDETGKCDKPECL-----CIPT-EGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKS 714
C +G C +P+ CI T + C CL + K CS P Q++ + DKS
Sbjct: 1954 CRTSGACQRPQACPLASRCIETFTDRRCECLPGHSGPDCKAYIKCSGEPCQNRGVCVDKS 2013
>SB_3579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 511 CKEDGKLLRCDDCKCDETGKCDKPECLCIPT 603
CK G+LL CD C C P IPT
Sbjct: 190 CKASGELLMCDTCTLVYHLSCLDPPLTTIPT 220
>SB_2351| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-07)
Length = 137
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 284 ESPHAESNFNCTVFN-KKMACKTNICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCD 460
E P ++ F F +K C +C+ + Q K+C ++C C T +S E KC
Sbjct: 35 ERPLTKNYFKKPPFEERKHLCP--VCEDIFVSPVQIKECGHRLCQHCYKTIWRSPEPKCP 92
Query: 461 K 463
K
Sbjct: 93 K 93
>SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20)
Length = 2232
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +1
Query: 472 HLCTD*RKAMRL-LCKEDGKLLRCDDCKCDETGKCDKPECLCIPTEGKPCICLCSD--DK 642
H C K + + L +++GK C + KC + P+ LC T G + D DK
Sbjct: 423 HKCGTCEKLIDMHLPRKEGKEHVCGEYKCSVCKEMVPPDHLCYVTTGSAALPKDCDAGDK 482
Query: 643 GNIK-VCDDCSCTPAQSK 693
G + + D P +SK
Sbjct: 483 GRTRWIIFDFEAMPLESK 500
>SB_59124| Best HMM Match : Bac_luciferase (HMM E-Value=1.6)
Length = 1953
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 551 SVMKLANVINRNVSVYRLKE-NLVFACVAMTKVI*RYAMIAHVLLLSLKN*NVTN 712
SV +VI+R+ + YRL ++ AC+ +T + Y +I HV+ S TN
Sbjct: 1673 SVSINTHVISRSHTDYRLNTVSIDHACLILTTALILYPLITHVISCSHTEEQATN 1727
>SB_54652| Best HMM Match : Retrotrans_gag (HMM E-Value=0.52)
Length = 721
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -3
Query: 587 HSGLSHLPVSSHLQSSQRRSFPSSLQSKRMAFLQSVHKCNQICHISVL 444
HSG P + H + S+ F + +K F + C Q CH S+L
Sbjct: 647 HSGRRQGPTAFHFEESKITQFCPEITAKARLFDFTWILCRQPCHRSLL 694
>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 502 RLLCKEDGKLLRCDDCK-CDETGKCDKPECLC 594
++L G DDC C KC K EC+C
Sbjct: 632 KILAALSGTENETDDCNGCHHNAKCVKKECIC 663
>SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1574
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +1
Query: 538 CDDCKCDETGKCDKPECLC--IPTEGKPC-ICLCSDDKGNIKVCDDC 669
C C CD TG + EC P G C+C + G ++ CD C
Sbjct: 1406 CIACNCDPTGGVNGGECEAKNDPAAGLVAGRCICKRNVGGVR-CDRC 1451
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
Frame = +1
Query: 538 CDDCKCDETG---KC--DKPECLCIP-TEGKPCICLCSDDKGNIKV---CDDCSCTPAQS 690
C C C+ G +C D C C EG+ C S+ G C +C+C S
Sbjct: 1466 CKACGCNPLGTIGECNPDTGRCTCKRYVEGEDCDRCASEYWGLSSTPAGCSNCACDVGGS 1525
Query: 691 KELKCDKSGCIC 726
+ +CDK C
Sbjct: 1526 YDNQCDKQTGQC 1537
>SB_20407| Best HMM Match : ResIII (HMM E-Value=0.36)
Length = 1175
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 622 CLCSDDKGNIKVCDDCSCTPAQSKELKCDKSGCICVP 732
CLC D +++C DC + A S L K +C P
Sbjct: 869 CLCEDRGKRLRLCRDCG-SAAPSSRLHDIKGRILCQP 904
>SB_16968| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1101
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 302 SNFNCTVFNKKMACKTNICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCDKSGC--- 472
++ NC +N + +CK N+ R T +E + + D C K CD G
Sbjct: 439 ASLNCDQYNGQCSCKPNVHTR-TCQECKHGYWDFPKTLDTDC-----KRCDCDYGGSVLQ 492
Query: 473 ICVPTEGKPCVC 508
IC T G C+C
Sbjct: 493 ICNKTTGS-CMC 503
Score = 27.9 bits (59), Expect = 9.4
Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 12/83 (14%)
Frame = +1
Query: 538 CDDCKCDETGK----CD--KPECLCIPTEGKPCICLCSDDKGNIKV---CDDCSCTPAQS 690
C C C TG C+ +C C P C+D C +C C + S
Sbjct: 775 CAPCDCVSTGSHHLVCNAVSGQCPCKPGVITRTCSRCNDSFYGYTTGSGCVECRCNMSGS 834
Query: 691 KELKCD--KSGCICV-PTEGKSC 750
+ +CD C C T+G C
Sbjct: 835 ADAQCDDVTGNCTCKNSTDGAKC 857
>SB_52909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 55
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 568 KCDKPECLCIPTEGKPCICL-CSDDKGNIKVCDDCSCTPAQSKELKCD 708
KC+ +C C+ EG C + C K C+ C + + +KC+
Sbjct: 7 KCECVKCECVKCEGVKCEGVKCEGVKCEGVKCEGVKCEGVKCEGVKCE 54
>SB_49127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -1
Query: 643 LCHRYTGKYKVFLQSVYRDIPVYHICQFHHTCSRHSEGA 527
+CHR K +L Y ++P I F C H E A
Sbjct: 105 ICHRGRDKTAKYLSENYNNLPKQIITLFTSLCKLHQEQA 143
>SB_31319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1186
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +2
Query: 308 FNCTVFNKKMACKTNICKRLTSEEDQRKQCNIKVCNDCSCTPAQSKELKCDKS 466
+ C + + ++C + ++ D+RK CNI+ C P + K KC K+
Sbjct: 585 YQCIRSIDNVRVQDSLCTEIVAKPDRRKVCNIQPC-PARWVPGEWK--KCGKT 634
>SB_26932| Best HMM Match : rve (HMM E-Value=3.2)
Length = 241
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -1
Query: 643 LCHRYTGKYKVFLQSVYRDIPVYHICQFHHTCSRHSEGA 527
+CHR K +L Y ++P I F C H E A
Sbjct: 76 ICHRGKNKTAKYLSENYSNLPKQIITLFTSICKLHQEQA 114
>SB_55657| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 868
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +1
Query: 523 GKLLRCDDCKCDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELK 702
G L D+ C + +C+ LC P G C+ N K CSC P + + K
Sbjct: 543 GYKLMSDEKTCQDVDECENAAQLCPPDMGLQCM--------NTKGSYVCSCPPGRFAKKK 594
Query: 703 CDKSG 717
KSG
Sbjct: 595 --KSG 597
>SB_54959| Best HMM Match : TatC (HMM E-Value=0.44)
Length = 359
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/70 (21%), Positives = 32/70 (45%)
Frame = -3
Query: 413 CIP*YYIAYVDPLHLLNAYKYSFCRPSFY*TQYN*NLIQRVGSRLFGEVISKASATVLDS 234
C+ ++ YV+P+ N +F F L+ R + +FG +++ A+ ++L+
Sbjct: 244 CVAISFVYYVEPVSQENQVVIAFIILVFVYVLIIFELVHRATAAMFGALLALATLSMLNM 303
Query: 233 RRLAAAAVAW 204
R + W
Sbjct: 304 RPSLEVILTW 313
>SB_47789| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-34)
Length = 262
Score = 27.9 bits (59), Expect = 9.4
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = +1
Query: 502 RLLCK-EDGKLLRCDDCKCDETGKCDKPE--C---LCIPTEGKPCICLCSDDKGNIKVCD 663
R++C+ ++G++L CK +G C + C CIP+ K C +D G+ +
Sbjct: 165 RIICRCQNGEVLVNGQCKT-LSGTCAPGQFKCGNGKCIPSSWK---CDHDNDCGDNSDEN 220
Query: 664 DCSCTPAQSKELKCDKSGCI 723
+C + + KCD CI
Sbjct: 221 NCPYSTCNPSQFKCDNGRCI 240
>SB_39739| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 1120
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Frame = +1
Query: 538 CDDCKCDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSG 717
CD + +C + C C+ G P D K ++ C P ++KCD
Sbjct: 82 CDPSGAFKQTQCHEGYCFCVDKHGIP------DMKTRVRGKPTCPVCPKGVSQMKCDVML 135
Query: 718 C---ICVPTEGKSC 750
C C E SC
Sbjct: 136 CKTATCPGYEKASC 149
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 508 LCKEDGKLLRCDDCKCDETGKCDKPECLCIPTEGKPC-ICLCSDDKGNIK 654
+C E G+LL CD C C P +P C +C +D+ + K
Sbjct: 1732 VCSEGGELLCCDICPLAYHVHCAYPPLRRVPRGNWACQVCTGADEDRSSK 1781
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,925,443
Number of Sequences: 59808
Number of extensions: 503583
Number of successful extensions: 1915
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1842
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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