Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0200
         (754 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    36   0.001
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    31   0.029
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    28   0.27 
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   4.4  
DQ370044-1|ABD18605.1|   99|Anopheles gambiae putative salivary ...    23   7.7  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.7  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 35.9 bits (79), Expect = 0.001
 Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
 Frame = +2

Query: 314  CTVFNKKMACKTNICKRLTSEEDQRKQCNI---KVCNDCSCTPAQSKELKCDK-SG-CIC 478
            C   N    CK N+  R T  E +    NI     C  C+C P  S    CD  SG C C
Sbjct: 902  CDAINGNCHCKPNVIGR-TCNECKNGYWNIVSGNGCESCNCDPIGSYNASCDTYSGDCFC 960

Query: 479  VP-TEGKPC 502
             P   GK C
Sbjct: 961  KPGVVGKKC 969



 Score = 34.3 bits (75), Expect = 0.004
 Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 18/89 (20%)
 Frame = +1

Query: 538  CDDCKC-----DETGK----CD--KPECLCIPTE-GKPCICLCSDDKGNI---KVCDDCS 672
            C++C C     ++T K    CD     C C P   G+ C   C +   NI     C+ C+
Sbjct: 882  CEECSCYPRGTEQTEKGISICDAINGNCHCKPNVIGRTCN-ECKNGYWNIVSGNGCESCN 940

Query: 673  CTPAQSKELKCDK-SG-CICVP-TEGKSC 750
            C P  S    CD  SG C C P   GK C
Sbjct: 941  CDPIGSYNASCDTYSGDCFCKPGVVGKKC 969



 Score = 31.5 bits (68), Expect = 0.029
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +1

Query: 658 CDDCSCTPAQSKELKCDKSG-CICVP-TEGKSC 750
           C +C C P  S+ L+C+  G C C P   G+ C
Sbjct: 394 CINCGCDPVGSRSLQCNAEGRCQCKPGVTGEKC 426



 Score = 31.1 bits (67), Expect = 0.038
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +2

Query: 410 CNDCSCTPAQSKELKCDKSG-CICVP-TEGKPC 502
           C +C C P  S+ L+C+  G C C P   G+ C
Sbjct: 394 CINCGCDPVGSRSLQCNAEGRCQCKPGVTGEKC 426


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 31.5 bits (68), Expect = 0.029
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 13/69 (18%)
 Frame = +1

Query: 553 CDETGKCDKPECLCIP-TEGKPCIC---------LCSDDKGNIKVCDDCSCTPAQSK--- 693
           C + G+C   +C C P  EG+ C C         +C      I  C  CSC  + S    
Sbjct: 535 CSDRGECICGQCYCNPGFEGEHCECNECATIDGSICGGPDHGICTCGTCSCFDSWSGDNC 594

Query: 694 ELKCDKSGC 720
           E   D +GC
Sbjct: 595 ECTTDTTGC 603


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 11/84 (13%)
 Frame = +1

Query: 520 DGKLLRCDDCKCDETGKCDKPECLCIPTEGKPCIC-LCSDDKGNIKVCDDC-----SCTP 681
           DG+   CD+  CD  G       LC   +   C+C  C   +G      DC     +C P
Sbjct: 584 DGRYCECDNFSCDRPG-----GLLCSGPDHGRCVCGQCECREGWTGPACDCRASNETCMP 638

Query: 682 AQSKEL-----KCDKSGCICVPTE 738
               EL      C+   C C  TE
Sbjct: 639 PGGGELCSGHGTCECGTCRCTVTE 662


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 610 KPCICLCSDDKGNIKVCDDCSC 675
           KPCIC    +  NI V  D SC
Sbjct: 366 KPCICHRDLNSRNILVKSDLSC 387


>DQ370044-1|ABD18605.1|   99|Anopheles gambiae putative salivary
           secreted peptide withTIL domain protein.
          Length = 99

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +2

Query: 311 NCTVFNKKMACKTNICKRLTSEEDQRKQCNIKVCNDCSCTP 433
           +CTV N++     + C+R  +   Q   C     + C C P
Sbjct: 24  DCTVENEEYYSCASPCRRNCTNLAQMLSCTGVCVSGCFCRP 64


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 628 CSDDKGNIKVCDDCSCTPAQSK 693
           C+DD G IK  D+    PAQ++
Sbjct: 702 CTDDAGKIKHNDNPFIEPAQTQ 723


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,217
Number of Sequences: 2352
Number of extensions: 16882
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)