Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0200
(754 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 1.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 1.3
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 24 1.8
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 23 2.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 3.1
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 22 5.4
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 5.4
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 22 7.1
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 9.4
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 9.4
AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-lik... 21 9.4
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -1
Query: 631 YTGKYKVFLQSVYRDIPVYHICQFHHTCSRHSEGAFHLPY 512
++ K + L V I + ++ +F + C ++ GAF +PY
Sbjct: 22 WSSKIEFILSVVGLAIGLGNLWRFPYLCYKNGGGAFMVPY 61
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -1
Query: 631 YTGKYKVFLQSVYRDIPVYHICQFHHTCSRHSEGAFHLPY 512
++ K + L V I + ++ +F + C ++ GAF +PY
Sbjct: 75 WSSKIEFILSVVGLAIGLGNLWRFPYLCYKNGGGAFMVPY 114
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 23.8 bits (49), Expect = 1.8
Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +1
Query: 511 CKEDGKLLRCDDCKCDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDCS-CTP 681
C + RCD +C P+ LCI C+C + KVC S C P
Sbjct: 37 CPSNEIFSRCDG-RCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKCLP 93
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 23.4 bits (48), Expect = 2.3
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 511 CKEDGKLLRCDDCKCDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVC 660
C + RCD +C P+ LCI C+C + KVC
Sbjct: 37 CPSNEIFSRCDG-RCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVC 85
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 371 LLNAYKYSFCRPS 333
L NAYK FC+P+
Sbjct: 16 LSNAYKQGFCQPT 28
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 455 CDKSGCICVPTEGK 496
C+K GCIC T K
Sbjct: 74 CEKVGCICRKTSFK 87
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 703 CDKSGCICVPTEGK 744
C+K GCIC T K
Sbjct: 74 CEKVGCICRKTSFK 87
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 574 HICQFHHTCSRHSEGAFHLPY 512
++ +F + C ++ GAF +PY
Sbjct: 3 NVWRFPYLCYKNGGGAFLIPY 23
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.8 bits (44), Expect = 7.1
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +2
Query: 392 QCNIKVCNDCSCTPAQSKELKCDKSGCICVPTEGKPCVCFVRKMES 529
QC+ C CS +++ +C K+ C+P +RK S
Sbjct: 84 QCSCNKCIGCS-----AEKFECSKTSNPCLPHRNSDRDLNIRKWSS 124
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 75 FILIHTEFIYPLQKSDVTRTELGC 4
F + +E + +++ + RTELGC
Sbjct: 312 FDRVLSELVSKMREMKMDRTELGC 335
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 75 FILIHTEFIYPLQKSDVTRTELGC 4
F + +E + +++ + RTELGC
Sbjct: 312 FDRVLSELVSKMREMKMDRTELGC 335
>AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-like
protein protein.
Length = 130
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 560 KLANVINRNVSVYRLKENLVFACVAMTKV 646
K++N +N + +LKE ++ A+TK+
Sbjct: 94 KISNELNEMCPLEKLKERRIWRDDALTKL 122
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,779
Number of Sequences: 438
Number of extensions: 4054
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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