Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0200
(754 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea... 33 0.20
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea... 33 0.20
At2g19110.1 68415.m02231 ATPase E1-E2 type family protein / halo... 33 0.27
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 33 0.27
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 33 0.27
At3g51340.1 68416.m05620 aspartyl protease family protein contai... 31 0.62
At3g16160.1 68416.m02040 tesmin/TSO1-like CXC domain-containing ... 31 0.82
At4g21380.1 68417.m03089 S-locus protein kinase, putative (ARK3)... 30 1.4
At5g22355.1 68418.m02608 DC1 domain-containing protein contains ... 30 1.9
At1g53030.1 68414.m06003 cytochrome c oxidase copper chaperone f... 29 2.5
At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nea... 29 3.3
At5g17880.1 68418.m02097 disease resistance protein (TIR-NBS-LRR... 28 5.8
At3g12000.1 68416.m01486 S-locus related protein SLR1, putative ... 28 5.8
At5g12400.1 68418.m01458 PHD finger transcription factor, putati... 28 7.7
At3g61380.1 68416.m06869 expressed protein 28 7.7
At3g14430.1 68416.m01829 expressed protein 28 7.7
>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 514 KEDGKLLRCDDC-KCDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDC-SCTPAQ 687
K DG +C+D +C E C PEC C T G C CS D I+ D C S T AQ
Sbjct: 508 KGDGTK-KCEDINECKEKKACQCPECSCKNTWGS-YECSCSGDLLYIRDHDTCISKTGAQ 565
>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 514 KEDGKLLRCDDC-KCDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDC-SCTPAQ 687
K DG +C+D +C E C PEC C T G C CS D I+ D C S T AQ
Sbjct: 508 KGDGTK-KCEDINECKEKKACQCPECSCKNTWGS-YECSCSGDLLYIRDHDTCISKTGAQ 565
>At2g19110.1 68415.m02231 ATPase E1-E2 type family protein /
haloacid dehalogenase-like hydrolase family protein /
heavy-metal-associated domain-containing protein similar
to cadmium efflux pump protein from Geobacillus
stearothermophilus [GI:16753175], cadmium resistance
protein B from Staphylococcus aureus [GI:14020985];
T20K24.13 has been merged with T20K24.12 per suggestion
of Dr. Kristian Axelsen (axe@biobase.dk)
Length = 1172
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = +2
Query: 464 SGCICVPTEGKPCVCFVRKMESSFAVTTASVMKLANVINRNVSVYRLKENLVFACVAMTK 643
+G ICV T C V KM +S K +I++ Y LV ACVA+
Sbjct: 275 NGYICVKTTSLAGDCVVAKMAKLVEEAQSSKTKSQRLIDKCSQYYTPAIILVSACVAIVP 334
Query: 644 VI*RYAMIAHVLLLSL 691
VI + + H L+L
Sbjct: 335 VIMKVHNLKHWFHLAL 350
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 514 KEDGKLLRCDDC-KCDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDC-SCTPAQ 687
K DG + +C+D +C E C PEC C T G C CS D ++ D C S T +Q
Sbjct: 508 KGDG-VKKCEDINECKEKKACQCPECSCKNTWGS-YECSCSGDLLYMRDHDTCISKTGSQ 565
Query: 688 SK 693
K
Sbjct: 566 VK 567
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 514 KEDGKLLRCDDC-KCDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDC-SCTPAQ 687
K DG + +C+D +C E C PEC C T G C CS D ++ D C S T +Q
Sbjct: 508 KGDG-VKKCEDINECKEKKACQCPECSCKNTWGS-YECSCSGDLLYMRDHDTCISKTGSQ 565
Query: 688 SK 693
K
Sbjct: 566 VK 567
>At3g51340.1 68416.m05620 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 518
Score = 31.5 bits (68), Expect = 0.62
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 532 LRCDDCKCDETGKCDKPECLC 594
+RC D +C +GKC PE +C
Sbjct: 154 IRCSDKRCFGSGKCSSPESIC 174
>At3g16160.1 68416.m02040 tesmin/TSO1-like CXC domain-containing
protein low similarity to cysteine-rich polycomb-like
protein (cpp1) [Glycine max] GI:4218187; contains Pfam
profile PF03638: Tesmin/TSO1-like CXC domain
Length = 360
Score = 31.1 bits (67), Expect = 0.82
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 550 KCDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSGCICV 729
K DE G + C + K C+ L D + VC DC C + KCD V
Sbjct: 55 KTDEEGITSRKHKGCRCKQSK-CLKLYCDCFASGVVCTDCDCVDCHNNSEKCDAREAAMV 113
Query: 730 PTEGKS 747
G++
Sbjct: 114 NVLGRN 119
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/67 (23%), Positives = 23/67 (34%)
Frame = +2
Query: 407 VCNDCSCTPAQSKELKCDKSGCICVPTEGKPCVCFVRKMESSFAVTTASVMKLANVINRN 586
VC DC C + KCD V G+ F K S A+ +++R
Sbjct: 89 VCTDCDCVDCHNNSEKCDAREAAMVNVLGRNPNAFSEKALGSLTDNQAAPDTKPGLLSRG 148
Query: 587 VSVYRLK 607
R +
Sbjct: 149 CKCKRTR 155
>At4g21380.1 68417.m03089 S-locus protein kinase, putative (ARK3)
identical to PIR|T05180|T05180 S-receptor kinase ARK3
precursor - [Arabidopsis thaliana]
Length = 850
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 389 KQCNIKVCNDCSCTPAQSKELKCDKSGCI 475
K+C K DC+CT + +++ SGC+
Sbjct: 376 KECEQKCLRDCNCTAFANTDIRGSGSGCV 404
>At5g22355.1 68418.m02608 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain; similar to ULI3 [Arabidopsis
thaliana] GI:17225050
Length = 664
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 DGKLLRCDDCKCDETGKC-DKPECLCIPTEGKPCICLCSDDKGNIKV-CDDCSCTPAQSK 693
DG LL CD C D C D P+ + + P + LC + K CD C SK
Sbjct: 520 DGYLLSCDTCDFDLDLHCTDLPKTVKHSCDNHP-LSLCYGENATGKYWCDICEAETDPSK 578
Query: 694 EL-KCDKSGCICVPTEGKSCI 753
C K CV T C+
Sbjct: 579 WFYTCSK----CVVTAHIECV 595
>At1g53030.1 68414.m06003 cytochrome c oxidase copper chaperone
family protein contains Pfam domian, PF05051: Cytochrome
C oxidase copper chaperone (COX17)
Length = 72
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 556 DETGKCDKPECLCIPTEGKP---CICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSGCIC 726
D DKP + TE KP C C D K K+ D+C +S K ++ +C
Sbjct: 8 DSACSLDKPSKDVVATETKPKKRICCACPDTK---KLRDECIVEHGESACTKWIEAHILC 64
Query: 727 VPTEG 741
+ +EG
Sbjct: 65 LRSEG 69
>At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
(GP:1737218) [Arabidopsis thaliana]
Length = 623
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 514 KEDGKLLRCDDC-KCDETGKCDKPECLCIPTEGKPCICLCSDDKGNIKVCDDC 669
K DG + C+D +C E C PEC C T G C CS+ ++ D C
Sbjct: 503 KGDG-VKNCEDVDECKEKTVCQCPECKCKNTWGS-YECSCSNGLLYMREHDTC 553
>At5g17880.1 68418.m02097 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1197
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +2
Query: 365 LTSEEDQRKQCNIKVCNDCSCTPAQSKELK-CDKSGCICVPTEGKPCVCFV--RKMESSF 535
L ++ Q + ++K C + + P L+ + GC + T KP VC + + + SSF
Sbjct: 859 LLNKFSQLQWLHLKYCKNLTHVPQLPPNLQYLNVHGCSSLKTVAKPLVCSIPMKHVNSSF 918
Query: 536 AVTTASVMKLA 568
T + ++ A
Sbjct: 919 IFTNCNELEQA 929
>At3g12000.1 68416.m01486 S-locus related protein SLR1, putative
(S1) identical to S-locus related protein SLR1 homolog
(AtS1) GI:246209 Arabidopsis thaliana]; contains Pfam
profiles PF01453: Lectin (probable mannose binding),
PF00954: S-locus glycoprotein family
Length = 439
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 392 QCNIKVCNDCSCTPAQSKELKCDKSGCI 475
+C + DC+CT +K+++ SGC+
Sbjct: 386 ECKERCSKDCNCTGFANKDIQNGGSGCV 413
>At5g12400.1 68418.m01458 PHD finger transcription factor, putative
similarity to predicted proteins, Arabidopsis thaliana
Length = 1595
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 511 CKEDGKLLRCDDCKCDETGKC 573
CK DG LL CD C KC
Sbjct: 614 CKMDGSLLCCDGCPAAYHSKC 634
>At3g61380.1 68416.m06869 expressed protein
Length = 718
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 272 EVISKASATVLDSRRLAAAAVAWRCESRRDAVMPVKT 162
EV+SK A V+ R+ + W+ E RR+ KT
Sbjct: 156 EVVSKQEAVVIPKRKANFFSRKWKSEERRNRSQVAKT 192
>At3g14430.1 68416.m01829 expressed protein
Length = 76
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 717 TRFV--TFQFFRLSRST*AIIAYLYITFVIATQANTRFSFSR 598
TRFV F FFRL+ + ++ IT+VI +R ++R
Sbjct: 21 TRFVDSVFYFFRLAEFEILFVLFMLITYVIFKDLTSRPEYNR 62
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,698,238
Number of Sequences: 28952
Number of extensions: 326821
Number of successful extensions: 997
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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