Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0199
         (772 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.13 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    26   0.29 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    26   0.29 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.67 
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    24   1.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 7/40 (17%), Positives = 21/40 (52%)
 Frame = +2

Query: 548 FCDLVVLRLILKYINTTFLSYTHYVSVSQYFIFCCVFILY 667
           +C  ++  + L ++   +  +  ++  + + +FCC FI +
Sbjct: 150 YCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFF 189



 Score = 27.1 bits (57), Expect = 0.17
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = +1

Query: 460 ILFLYVMFYFLTSYLYIIFFYIPSLIIYDIL*FGCPAINIKIYKYNFFIIHSLCFCFTIF 639
           +LFL  ++YF+    +++  Y           F C  I   ++      I+     F IF
Sbjct: 127 LLFLLCIYYFVVPLFFLLCIYY----------FYCAFIIFTVHLLFLLCIYHFFCAFIIF 176

Query: 640 --HILLCVHFVF 669
             H+L C  F+F
Sbjct: 177 TMHLLFCCAFIF 188



 Score = 25.0 bits (52), Expect = 0.67
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
 Frame = +2

Query: 542 MIFCDLVVLRLILKYINTTFLSYT-H-------YVSVSQYFIFCCVFILY 667
           + +C L++L L + Y    F+ +T H       Y     + +FCC FI++
Sbjct: 227 LFYCVLIIL-LCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIF 275



 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/49 (18%), Positives = 23/49 (46%)
 Frame = +2

Query: 551 CDLVVLRLILKYINTTFLSYTHYVSVSQYFIFCCVFILYFDKFYILWAI 697
           C  ++  + L ++   +  Y   + +   + FC  FI++   FY  +++
Sbjct: 270 CAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSL 318



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -3

Query: 401 VIPILLYGFHVIYL*KLFTLN*YRLHHIILFLY*HNLF 288
           V+ ILL  ++  Y   LFT++   L  I  F Y H LF
Sbjct: 231 VLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLF 268


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 13/55 (23%), Positives = 25/55 (45%)
 Frame = +1

Query: 154 RGFRTFLDTVRLIRVKIDAVSKYHRVCAVLDAFQVHTVGFIVYKENKLCQYRNNI 318
           + +  F+    ++++ +DA      +  VL A     + F + K  K+ Q  NNI
Sbjct: 55  KDYAKFIHIKAVVQITLDATLYVQNIYTVLTALTKKPLWFKLLKNLKMVQNHNNI 109


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 13/55 (23%), Positives = 25/55 (45%)
 Frame = +1

Query: 154 RGFRTFLDTVRLIRVKIDAVSKYHRVCAVLDAFQVHTVGFIVYKENKLCQYRNNI 318
           + +  F+    ++++ +DA      +  VL A     + F + K  K+ Q  NNI
Sbjct: 55  KDYAKFIHIKAVVQITLDATLYVQNIYTVLTALTKKPLWFKLLKNLKMVQNHNNI 109


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 617 YVSVSQYFIFCCVFILYFDKFYILWAI 697
           YVS+ Q     C FI  F  +YI +++
Sbjct: 137 YVSLLQLVFVFCYFIYLFTVYYIYYSV 163


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 628 FTIFHILLCVHFVF 669
           FT+F +L C H VF
Sbjct: 3   FTVFLVLTCAHVVF 16


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 14/56 (25%), Positives = 26/56 (46%)
 Frame = -1

Query: 457  SFVTDNIIFISIRGISLSMLYQYCCMAST*FICKNCSH*ISTDCTTLYYFYIDIIY 290
            +F ++ I+++ +  IS   +    C A   +IC  C   I      +Y+FY+   Y
Sbjct: 984  AFSSEKIVWLHLVYISFLGII---CAADVFYICHVCYATIQEVRAKIYFFYLVKFY 1036


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/52 (21%), Positives = 25/52 (48%)
 Frame = +1

Query: 499 YLYIIFFYIPSLIIYDIL*FGCPAINIKIYKYNFFIIHSLCFCFTIFHILLC 654
           +L++ + ++ S +++D           + YKY   + H     FT+F++  C
Sbjct: 135 HLFVRYVFVTSYLLFDYF-----VQRNQEYKYYQILSHLSGIFFTVFNVAQC 181



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 463 LFLYVMFYFLTSYLYIIFF 519
           + L+V + F+TSYL   +F
Sbjct: 134 IHLFVRYVFVTSYLLFDYF 152



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 385 CMAST*FICKNCSH*ISTDCTTLYYFYIDIIY 290
           C A   +IC  C   I      +Y+FY+   Y
Sbjct: 286 CAADVFYICHVCYATIQEVRAKIYFFYLVKFY 317


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 360 QINYVEAIQQYWYN 401
           Q NY    QQY+YN
Sbjct: 349 QYNYPNPQQQYYYN 362


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 360 QINYVEAIQQYWYN 401
           Q NY    QQY+YN
Sbjct: 297 QYNYPNPQQQYYYN 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,881
Number of Sequences: 336
Number of extensions: 4099
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)