Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0199
         (772 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0663 + 23248869-23250371                                         29   5.4  
08_02_0707 - 20212190-20214592                                         28   7.2  
02_04_0297 + 21709873-21711375                                         28   7.2  

>06_03_0663 + 23248869-23250371
          Length = 500

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 23/77 (29%), Positives = 37/77 (48%)
 Frame = +1

Query: 40  DLQGSRRQTSHRTTRLFSPLIRLTDHKSYLGFNARENWRGFRTFLDTVRLIRVKIDAVSK 219
           DLQG RR T+ R  R+FS +  + D +     + R+N      FLD++    +++ A  K
Sbjct: 232 DLQGLRRWTTKRFNRVFSIMGDIIDRRL---AHIRDNKPSHNDFLDSL----LELMAAGK 284

Query: 220 YHRVCAVLDAFQVHTVG 270
             RV  +   F+    G
Sbjct: 285 IDRVNVLDMLFEAFVAG 301


>08_02_0707 - 20212190-20214592
          Length = 800

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +2

Query: 2   EVDPRYVTDQVARIFREAGVKHLTVQLD 85
           E D   + ++ + IF EAG++ LT+Q++
Sbjct: 769 EADKSSIREKASDIFHEAGIQDLTIQIE 796


>02_04_0297 + 21709873-21711375
          Length = 500

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 23/77 (29%), Positives = 37/77 (48%)
 Frame = +1

Query: 40  DLQGSRRQTSHRTTRLFSPLIRLTDHKSYLGFNARENWRGFRTFLDTVRLIRVKIDAVSK 219
           DLQG RR T+ R  R+FS +  + D +     + R+N      FLD++    +++ A  K
Sbjct: 232 DLQGLRRWTTKRFNRVFSIMGDIIDRRL---AHIRDNKPRHDDFLDSI----LELMAAGK 284

Query: 220 YHRVCAVLDAFQVHTVG 270
             RV  +   F+    G
Sbjct: 285 IDRVNVLNMLFEAFVAG 301


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,951,453
Number of Sequences: 37544
Number of extensions: 301168
Number of successful extensions: 524
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)