Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0199
         (772 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113365-1|AAM29370.1|  366|Drosophila melanogaster LD23375p pro...    35   0.14 
AE014297-1256|AAF54604.1|  366|Drosophila melanogaster CG6672-PA...    35   0.14 
AY094802-1|AAM11155.1|  424|Drosophila melanogaster LD24780p pro...    31   1.3  
AE014297-4788|AAN14284.1|  318|Drosophila melanogaster CG2261-PB...    31   1.3  
AE014297-4787|AAF57183.1|  424|Drosophila melanogaster CG2261-PA...    31   1.3  

>AY113365-1|AAM29370.1|  366|Drosophila melanogaster LD23375p
           protein.
          Length = 366

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 5   VDPRYVTDQVARIFREAGVKHLTVQLDY 88
           VDP+YV      IF   GVK + +QLDY
Sbjct: 338 VDPKYVVTHTRMIFEAVGVKQIYIQLDY 365


>AE014297-1256|AAF54604.1|  366|Drosophila melanogaster CG6672-PA
           protein.
          Length = 366

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 5   VDPRYVTDQVARIFREAGVKHLTVQLDY 88
           VDP+YV      IF   GVK + +QLDY
Sbjct: 338 VDPKYVVTHTRMIFEAVGVKQIYIQLDY 365


>AY094802-1|AAM11155.1|  424|Drosophila melanogaster LD24780p
           protein.
          Length = 424

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = +1

Query: 37  EDLQGSRRQTSHRTTRLFSPLIRLTDHKSYLGFNARENWRGFRTFLDTVRLIRVKIDAVS 216
           ED++  R Q  H   R    L   TD  SYL F+ +E+     +   TV+L  +   +V 
Sbjct: 145 EDIEPGREQQGHPVIRT---LYDHTDEVSYLEFHPKEHILASASRDGTVKLFDIAKPSVK 201

Query: 217 KYHRV 231
           K H+V
Sbjct: 202 KAHKV 206


>AE014297-4788|AAN14284.1|  318|Drosophila melanogaster CG2261-PB,
           isoform B protein.
          Length = 318

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = +1

Query: 37  EDLQGSRRQTSHRTTRLFSPLIRLTDHKSYLGFNARENWRGFRTFLDTVRLIRVKIDAVS 216
           ED++  R Q  H   R    L   TD  SYL F+ +E+     +   TV+L  +   +V 
Sbjct: 145 EDIEPGREQQGHPVIRT---LYDHTDEVSYLEFHPKEHILASASRDGTVKLFDIAKPSVK 201

Query: 217 KYHRV 231
           K H+V
Sbjct: 202 KAHKV 206


>AE014297-4787|AAF57183.1|  424|Drosophila melanogaster CG2261-PA,
           isoform A protein.
          Length = 424

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = +1

Query: 37  EDLQGSRRQTSHRTTRLFSPLIRLTDHKSYLGFNARENWRGFRTFLDTVRLIRVKIDAVS 216
           ED++  R Q  H   R    L   TD  SYL F+ +E+     +   TV+L  +   +V 
Sbjct: 145 EDIEPGREQQGHPVIRT---LYDHTDEVSYLEFHPKEHILASASRDGTVKLFDIAKPSVK 201

Query: 217 KYHRV 231
           K H+V
Sbjct: 202 KAHKV 206


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,694,260
Number of Sequences: 53049
Number of extensions: 563678
Number of successful extensions: 1051
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)