Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0199
         (772 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81531-6|CAB04317.2|  330|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AC006673-5|AAF39919.2|  335|Caenorhabditis elegans Serpentine re...    30   2.1  
Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical ...    28   6.4  
Z35595-10|CAA84634.2|  387|Caenorhabditis elegans Hypothetical p...    28   8.5  
AC024882-12|AAF60928.2|  347|Caenorhabditis elegans Seven tm rec...    28   8.5  

>Z81531-6|CAB04317.2|  330|Caenorhabditis elegans Hypothetical
           protein F36D3.6 protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/62 (25%), Positives = 32/62 (51%)
 Frame = +1

Query: 481 FYFLTSYLYIIFFYIPSLIIYDIL*FGCPAINIKIYKYNFFIIHSLCFCFTIFHILLCVH 660
           FY L S++  +  +  +L+   I+ F  P+ N+   K++  ++H   F    +  +LC+ 
Sbjct: 14  FYLLCSHVITVIQFPLNLLGLYIVVFKTPS-NMSKVKFSMLVMHFTIFWIDFYWNILCIP 72

Query: 661 FV 666
           FV
Sbjct: 73  FV 74


>AC006673-5|AAF39919.2|  335|Caenorhabditis elegans Serpentine
           receptor, class h protein8 protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
 Frame = +1

Query: 487 FLTSYLYIIFFYIPSLIIYDIL*FGCPAINIKIYKYNFFIIHS-------LCFCFTIFHI 645
           F   Y  IIF ++P+ +IY     G   I++ +Y+    +IH+        C  +  +  
Sbjct: 85  FTAEYAPIIFLFLPACLIYT----GISIISLFVYRMEAVVIHASEGSIARRCVMYLRYMF 140

Query: 646 LLCVHFV 666
            +CV FV
Sbjct: 141 FICVVFV 147


>Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical
           protein Y7A9C.8 protein.
          Length = 310

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/68 (20%), Positives = 33/68 (48%)
 Frame = +1

Query: 460 ILFLYVMFYFLTSYLYIIFFYIPSLIIYDIL*FGCPAINIKIYKYNFFIIHSLCFCFTIF 639
           I  ++ +FY +T   Y++ F +  +   + L F   +   ++ K+ F+++  L  C  + 
Sbjct: 23  IFLIFTLFYLITFPFYVLSFNLNRMRDKNTLLFPTVSHFYEMVKFTFYLLVLLILCIPL- 81

Query: 640 HILLCVHF 663
            + +  HF
Sbjct: 82  -LFVATHF 88


>Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical
           protein F02D10.6 protein.
          Length = 199

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
 Frame = +1

Query: 472 YVMFYFLTSYLYIIFFYIPSLIIYDIL*FGCPAINIKIYK---------YNFFIIHSLCF 624
           Y+    + +++Y I+ +   L+I   L   C  +N  IY+         YN +I+++L +
Sbjct: 36  YLFINPVENFIYNIWMF--HLLIALFLSVFCKTLNFAIYRAGFRLLHMCYNVYILYTLGY 93

Query: 625 CFTIFHILLCVHFVF**ILYSLGHLVMN*RPTSSLNIKYMR 747
               FHI L   F F   +Y + +  M+  PT+ + I   +
Sbjct: 94  MIVPFHISLYFLFEFTYTVYGISYKQMD-YPTTWIVISLQK 133


>AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical
           protein Y53G8AM.4 protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = +1

Query: 469 LYVMFYFLTSYLYIIFFYIPSLIIYDIL*FGCPAINIKIYKYNFFIIHSLCFCFTIFHIL 648
           +Y +F +  S  YI+F  +    +  IL FGC  + I  YKY+ +      F      IL
Sbjct: 96  VYFLFGYGASIFYILFVALNC--VSSILQFGCFHVYITSYKYHKY---RAFFRGWFVPIL 150

Query: 649 LCVHFV 666
            C++FV
Sbjct: 151 NCLNFV 156


>Z35595-10|CAA84634.2|  387|Caenorhabditis elegans Hypothetical
           protein C01G6.3 protein.
          Length = 387

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +1

Query: 232 CAVLDAFQVHTVGFIVYKENKLCQYRNNIMWCNLY*FNVNSF 357
           C+VLD+F+ + + F VY E +L   + +   C  Y  ++N F
Sbjct: 16  CSVLDSFRANGIEFEVYGEGRLIPEKQH---CVPYTLDLNEF 54


>AC024882-12|AAF60928.2|  347|Caenorhabditis elegans Seven tm
           receptor protein 163 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
 Frame = +1

Query: 466 FLYVMFYFLTSYLYIIFFYIPSLIIYD-IL*FGCPAINIKIYKYNFF-------IIHSLC 621
           + Y+M YF    ++ IFF +  ++I   IL  G   I I   K  F         + S+C
Sbjct: 44  YKYLMIYFC---VFAIFFSVLDIVIQPYILSAGPGFIVITEIKDTFLGPFGETCFLSSIC 100

Query: 622 FCFTIFHILLCVHFVF 669
            CF +    + +HF++
Sbjct: 101 GCFGVILATIAIHFIY 116


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,168,568
Number of Sequences: 27780
Number of extensions: 332204
Number of successful extensions: 951
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)