Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0197
(684 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5SRN1 Cluster: Cell division cycle 40 homolog; n=27; E... 99 1e-19
UniRef50_Q2TA76 Cluster: CDC40 protein; n=6; Eutheria|Rep: CDC40... 99 1e-19
UniRef50_O60508 Cluster: Pre-mRNA-processing factor 17; n=13; Fu... 99 1e-19
UniRef50_O44729 Cluster: Yeast prp (Splicing factor) related pro... 66 6e-10
UniRef50_Q4P561 Cluster: Putative uncharacterized protein; n=1; ... 66 6e-10
UniRef50_O43071 Cluster: Pre-mRNA-processing factor 17; n=1; Sch... 60 7e-08
UniRef50_A6RDT8 Cluster: Putative uncharacterized protein; n=2; ... 51 3e-05
UniRef50_Q2UPN7 Cluster: MRNA splicing factor; n=7; Eurotiomycet... 46 9e-04
UniRef50_Q9XIJ3 Cluster: T10O24.21; n=5; Viridiplantae|Rep: T10O... 45 0.002
UniRef50_A2QPE3 Cluster: Contig An07c0320, complete genome; n=22... 45 0.002
UniRef50_Q54HF5 Cluster: Putative uncharacterized protein; n=1; ... 42 0.011
UniRef50_A5A8P6 Cluster: Putative uncharacterized protein; n=3; ... 41 0.032
UniRef50_Q010G1 Cluster: C86239 protein T10O24.21; n=1; Ostreoco... 40 0.043
UniRef50_Q84MU4 Cluster: Putative pre-mRNA splicing factor; n=2;... 38 0.30
UniRef50_A2TV06 Cluster: Putative uncharacterized protein; n=2; ... 33 4.9
UniRef50_Q4SE28 Cluster: Chromosome 3 SCAF14626, whole genome sh... 33 6.5
>UniRef50_Q5SRN1 Cluster: Cell division cycle 40 homolog; n=27;
Eumetazoa|Rep: Cell division cycle 40 homolog - Homo
sapiens (Human)
Length = 539
Score = 98.7 bits (235), Expect = 1e-19
Identities = 46/79 (58%), Positives = 56/79 (70%)
Frame = +1
Query: 271 VCAAPAVVPTNEDDTRVLIPANAKELTHNPKYEELFAPAFGPENPFQTQQMKATRNILSG 450
V +AP V + +T V + KE+ +NP YE +FAP FGPENPF+TQQM A RN+LSG
Sbjct: 54 VDSAPEVAVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSG 113
Query: 451 YVELAHISDFQFENQRRTF 507
Y E AHI+DF FE QRRTF
Sbjct: 114 YAEPAHINDFMFEQQRRTF 132
>UniRef50_Q2TA76 Cluster: CDC40 protein; n=6; Eutheria|Rep: CDC40
protein - Homo sapiens (Human)
Length = 280
Score = 98.7 bits (235), Expect = 1e-19
Identities = 46/79 (58%), Positives = 56/79 (70%)
Frame = +1
Query: 271 VCAAPAVVPTNEDDTRVLIPANAKELTHNPKYEELFAPAFGPENPFQTQQMKATRNILSG 450
V +AP V + +T V + KE+ +NP YE +FAP FGPENPF+TQQM A RN+LSG
Sbjct: 54 VDSAPEVAVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSG 113
Query: 451 YVELAHISDFQFENQRRTF 507
Y E AHI+DF FE QRRTF
Sbjct: 114 YAEPAHINDFMFEQQRRTF 132
>UniRef50_O60508 Cluster: Pre-mRNA-processing factor 17; n=13;
Fungi/Metazoa group|Rep: Pre-mRNA-processing factor 17 -
Homo sapiens (Human)
Length = 579
Score = 98.7 bits (235), Expect = 1e-19
Identities = 46/79 (58%), Positives = 56/79 (70%)
Frame = +1
Query: 271 VCAAPAVVPTNEDDTRVLIPANAKELTHNPKYEELFAPAFGPENPFQTQQMKATRNILSG 450
V +AP V + +T V + KE+ +NP YE +FAP FGPENPF+TQQM A RN+LSG
Sbjct: 54 VDSAPEVAVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSG 113
Query: 451 YVELAHISDFQFENQRRTF 507
Y E AHI+DF FE QRRTF
Sbjct: 114 YAEPAHINDFMFEQQRRTF 132
>UniRef50_O44729 Cluster: Yeast prp (Splicing factor) related
protein 17; n=3; Chromadorea|Rep: Yeast prp (Splicing
factor) related protein 17 - Caenorhabditis elegans
Length = 567
Score = 66.5 bits (155), Expect = 6e-10
Identities = 28/79 (35%), Positives = 48/79 (60%)
Frame = +1
Query: 271 VCAAPAVVPTNEDDTRVLIPANAKELTHNPKYEELFAPAFGPENPFQTQQMKATRNILSG 450
+ AP V + ++ KE+ NPK+++LF P GP N F+++Q ++ +N L+G
Sbjct: 37 IVTAPDVESKSAIRQVAIVDPKTKEIKSNPKFDQLFKPESGPVNHFKSEQQRSQKNTLTG 96
Query: 451 YVELAHISDFQFENQRRTF 507
+VE AH+++F F Q R+F
Sbjct: 97 FVEPAHLNEFHFNRQIRSF 115
>UniRef50_Q4P561 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 669
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/79 (41%), Positives = 45/79 (56%)
Frame = +1
Query: 271 VCAAPAVVPTNEDDTRVLIPANAKELTHNPKYEELFAPAFGPENPFQTQQMKATRNILSG 450
V AP V+ + +LI + N Y ++ AP GPENPF T+ A +N L+G
Sbjct: 109 VTLAPKVIYNSSASEALLIRPGDSTMHVNIPYADMTAPQLGPENPFATRTAGAQQNTLTG 168
Query: 451 YVELAHISDFQFENQRRTF 507
+VE A +SDF F NQ+RTF
Sbjct: 169 HVESAAVSDFDFRNQQRTF 187
>UniRef50_O43071 Cluster: Pre-mRNA-processing factor 17; n=1;
Schizosaccharomyces pombe|Rep: Pre-mRNA-processing
factor 17 - Schizosaccharomyces pombe (Fission yeast)
Length = 558
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 280 APAVVPTNEDDTRVLIPANAKELTHNPKYEELFAPAFGPENPFQTQQMKATRNILSGYVE 459
APAVV +DD V N++EL N E+ PA GP NPF T++ + +N ++GY E
Sbjct: 31 APAVVDNVKDDLIVSKGGNSRELARNVPVNEMVQPALGPANPFVTKEQDSIKNSITGYAE 90
Query: 460 LAHISDFQFENQ 495
++ +F F +
Sbjct: 91 REYVPNFVFNQE 102
>UniRef50_A6RDT8 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 583
Score = 50.8 bits (116), Expect = 3e-05
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Frame = +1
Query: 271 VCAAPAVVPTNEDDTRV---LIPANAKELTHNPKYEELFAPAFGPENPFQTQ---QMKAT 432
+ AAP V + ED +R+ L + LT+N Y++L P GPENPF++
Sbjct: 35 IVAAPDV--SIEDSSRLQLMLAKSTDTALTYNATYDDLSRPTLGPENPFRSAHGGNALKR 92
Query: 433 RNILSGYVELAHISDFQFENQRRTF 507
+N+L+G+ E IS+ F +Q RTF
Sbjct: 93 KNVLTGHAEETLISEATFNSQHRTF 117
>UniRef50_Q2UPN7 Cluster: MRNA splicing factor; n=7;
Eurotiomycetidae|Rep: MRNA splicing factor - Aspergillus
oryzae
Length = 582
Score = 46.0 bits (104), Expect = 9e-04
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +1
Query: 268 QVCAAPAVVPTNEDDTRVLIP-ANAKELTHNPKYEELFAPAFGPENPFQTQ---QMKATR 435
++ AAP V ++ ++++ +++ LT+N Y++L P GP NPF+ +
Sbjct: 30 KIVAAPEVNTEDQAHMQMMLANTSSQALTYNATYDDLSRPNQGPANPFKPDGPANGLKRK 89
Query: 436 NILSGYVELAHISDFQFENQRRTF 507
N+ +GY E A IS F Q RTF
Sbjct: 90 NVPTGYAEEAAISAATFATQHRTF 113
>UniRef50_Q9XIJ3 Cluster: T10O24.21; n=5; Viridiplantae|Rep:
T10O24.21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 280 APAVVPTNEDDTRVLIPANAKELTHNPKYEELFAPAFGPENPFQTQQM-KATRNILSGYV 456
A V N+ ++ + P + +NP +++L+AP FGP +P+ + + RN G V
Sbjct: 41 ALTVANVNQSKSKPIDPTQ-HVVFYNPTHDQLWAPMFGPAHPYAKDGIAQGMRNHKLGSV 99
Query: 457 ELAHISDFQFENQRRTF 507
E A I F FE Q TF
Sbjct: 100 EDASIGSFGFEEQYHTF 116
>UniRef50_A2QPE3 Cluster: Contig An07c0320, complete genome; n=22;
Pezizomycotina|Rep: Contig An07c0320, complete genome -
Aspergillus niger
Length = 583
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 271 VCAAPAVVPTNEDDTRVLIP-ANAKELTHNPKYEELFAPAFGPENPFQ---TQQMKATRN 438
+ AAP V ++ ++++ ++ LT+N Y++L P+ GP NPF+ +N
Sbjct: 32 IVAAPEVNTEDQAHMQMMLANTSSTALTYNATYDDLSRPSQGPANPFKPAGPANGLKRKN 91
Query: 439 ILSGYVELAHISDFQFENQRRTF 507
+ +G+ E A IS+ F Q RTF
Sbjct: 92 VPTGFAEEAAISEATFAAQHRTF 114
>UniRef50_Q54HF5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 595
Score = 42.3 bits (95), Expect = 0.011
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 325 IPANAKELTHNPKYEELFAPAFGPENPFQTQQMKAT---RNILSGYVELAHISDFQFENQ 495
I N K L +NP E L FGP+ PF + K +N +G VE HI+D+ F Q
Sbjct: 81 INPNDKILLYNPTVESLEGDIFGPKKPFSSNDKKLDPKFKNHTNGLVEDYHINDYAFNQQ 140
Query: 496 RRTF 507
+F
Sbjct: 141 VLSF 144
>UniRef50_A5A8P6 Cluster: Putative uncharacterized protein; n=3;
Eukaryota|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 274
Score = 40.7 bits (91), Expect = 0.032
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 271 VCAAPAVVPTNEDDTRVLIPANAKELTHNPKYEELFAPAFGPENPFQTQQMKATR 435
+ AP V + ++ KE+ NPK+++LF P GP N F+++Q TR
Sbjct: 35 IVTAPDVESKSAIRQVAIVDPKTKEIKSNPKFDQLFKPESGPVNHFKSEQFGTTR 89
>UniRef50_Q010G1 Cluster: C86239 protein T10O24.21; n=1;
Ostreococcus tauri|Rep: C86239 protein T10O24.21 -
Ostreococcus tauri
Length = 619
Score = 40.3 bits (90), Expect = 0.043
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 304 EDDTRVLIPANAKELTHNPKYEELFAPAFGPENPFQTQQM--KATRNILSGYVELAHISD 477
+DD + +T N Y+E+ AP GP + ++ ++ + RN G V++ +S
Sbjct: 95 DDDCETRADPTERNMTRNLTYDEMTAPIEGPLHEYREDRLTGRGARNHALGQVDVTSVSA 154
Query: 478 FQFENQRRTF 507
+ FE Q T+
Sbjct: 155 YSFEEQYNTY 164
>UniRef50_Q84MU4 Cluster: Putative pre-mRNA splicing factor; n=2;
Oryza sativa (japonica cultivar-group)|Rep: Putative
pre-mRNA splicing factor - Oryza sativa subsp. japonica
(Rice)
Length = 573
Score = 37.5 bits (83), Expect = 0.30
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 355 NPKYEELFAPAFGPENPF-QTQQMKATRNILSGYVELAHISDFQFENQRRTF 507
NP ++L+AP GP++P RN G+VE A + F F+ Q TF
Sbjct: 68 NPTADQLWAPVLGPQHPHAPISSASGNRNHKLGHVEDAAVLPFLFDEQYNTF 119
>UniRef50_A2TV06 Cluster: Putative uncharacterized protein; n=2;
Flavobacteriaceae|Rep: Putative uncharacterized protein
- Dokdonia donghaensis MED134
Length = 381
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 301 NEDDTRVLIPANAKELTHNPKYEELFAPAFGPENP 405
NE+D +V+ PAN +E +H P+ E L PE+P
Sbjct: 225 NENDEQVIAPANGEESSHGPEVEFLITTR-APEHP 258
>UniRef50_Q4SE28 Cluster: Chromosome 3 SCAF14626, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF14626, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 569
Score = 33.1 bits (72), Expect = 6.5
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +1
Query: 322 LIPANAKELTHNPKYEELFAPAFGPENPFQTQQMKATRNILSGYVELAH 468
LIP NA T NP L AP+ NPFQ + K T N +S +H
Sbjct: 458 LIPVNASAKTTNPFLSGLSAPS--ATNPFQAEVPKLTLNQMSSTSPASH 504
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,196,158
Number of Sequences: 1657284
Number of extensions: 12028937
Number of successful extensions: 28391
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 27623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28382
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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