Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0196
         (774 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF147791-1|AAD55679.1|  957|Homo sapiens mucin 11 protein.             33   1.1  
BC041100-1|AAH41100.1|  335|Homo sapiens SLC25A45 protein protein.     31   4.6  
AF321609-1|AAT09768.1|  834|Homo sapiens titin protein.                31   4.6  

>AF147791-1|AAD55679.1|  957|Homo sapiens mucin 11 protein.
          Length = 957

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 20/60 (33%), Positives = 28/60 (46%)
 Frame = +3

Query: 432  LGEQECTSHY*PK*TNRWQIWDDSISSGVWDLDKNTHFSAGGMVSKEFGHKRPDVGLQAE 611
            LG+Q  T H  P  T    + DD+I+SG+ +    TH S G + +          GLQ E
Sbjct: 878  LGQQSTTFHSSPGDTETTLLPDDTITSGLVEASTPTHSSTGSLHTTLTPASSTSAGLQEE 937


>BC041100-1|AAH41100.1|  335|Homo sapiens SLC25A45 protein protein.
          Length = 335

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -3

Query: 316 LFQRGHHRFVPKCQRPC--LPPLFVPSDVTGVSP*GLPA 206
           L   GHH+  P+  R C  LP L +   + G+SP  +PA
Sbjct: 234 LLPGGHHQQCPRLSRQCCHLPQLRISPPLVGMSPAAMPA 272


>AF321609-1|AAT09768.1|  834|Homo sapiens titin protein.
          Length = 834

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -2

Query: 356 LPRSSLKISLL*PAFPKRPSSFCPKVPKTLPPPIVCPK 243
           +P++++    L  A P +P S  P+VP+ LPP  V P+
Sbjct: 483 VPKAAVPEKKLPEAIPPKPESPPPEVPEVLPPKEVVPE 520


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,698,658
Number of Sequences: 237096
Number of extensions: 2343777
Number of successful extensions: 5711
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5707
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)