Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0195
(582 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 6e-31
SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 8e-31
SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 78 5e-15
SB_37839| Best HMM Match : HA2 (HMM E-Value=4e-21) 76 2e-14
SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09) 75 6e-14
SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06) 74 7e-14
SB_38249| Best HMM Match : HA2 (HMM E-Value=1.6e-26) 69 4e-12
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 65 3e-11
SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22) 63 1e-10
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_52252| Best HMM Match : DEAD (HMM E-Value=0.96) 52 5e-07
SB_6014| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_6592| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.074
SB_55153| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.52
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_20317| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_2642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_1344| Best HMM Match : HGTP_anticodon (HMM E-Value=4.4) 29 3.7
SB_581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 29 3.7
SB_10592| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_38704| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_1256| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 130 bits (315), Expect = 6e-31
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +1
Query: 256 PPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPG 435
PPGDIL+FLTGQEEIDTACEILYER KSLGPDVPELIILPVYSALPSEMQTRIF+PAPPG
Sbjct: 507 PPGDILVFLTGQEEIDTACEILYERTKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPG 566
Query: 436 SRK 444
SRK
Sbjct: 567 SRK 569
Score = 81.4 bits (192), Expect = 5e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 131 FEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLKGPRG 265
++APIFTIPGRTFPVE+LYTKE E+DYLDA+LITVMQIHL P G
Sbjct: 465 YKAPIFTIPGRTFPVEILYTKEAESDYLDAALITVMQIHLTEPPG 509
>SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 130 bits (314), Expect = 8e-31
Identities = 56/88 (63%), Positives = 73/88 (82%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHERT+HTD+LFGL+K + RP++KLI++SATLDA KFS +F +APIF IPGR FPV++
Sbjct: 209 AHERTLHTDILFGLVKDIARFRPDIKLIISSATLDADKFSSFFDDAPIFRIPGRRFPVDI 268
Query: 182 LYTKEPETDYLDASLITVMQIHLKGPRG 265
YTK PE DYLDA+++TV+QIH+ P G
Sbjct: 269 YYTKAPEADYLDATVVTVLQIHITQPDG 296
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3
Query: 510 PGFVKQKVYNSKTGMDSLVVTPIS 581
PGF KQK YN +TGM+SLVVTPIS
Sbjct: 335 PGFCKQKSYNPRTGMESLVVTPIS 358
Score = 40.7 bits (91), Expect(2) = 9e-09
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +1
Query: 442 KVVIATNIAETSLTIDGIYYVVALASLNRKS 534
+V++ATNIAETSLTIDGI YV+ +KS
Sbjct: 312 QVILATNIAETSLTIDGIIYVIDPGFCKQKS 342
Score = 36.3 bits (80), Expect(2) = 9e-09
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 256 PPGDILLFLTGQEEIDTACEIL 321
P GD+L+FLTGQEEI+TA IL
Sbjct: 294 PDGDVLVFLTGQEEIETAQVIL 315
>SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 100 bits (239), Expect = 1e-21
Identities = 49/93 (52%), Positives = 66/93 (70%), Gaps = 5/93 (5%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPE-----LKLIVTSATLDAVKFSQYFFEAPIFTIPGRT 166
AHERTIHTDVLFG++K A R + LK++V SATL+A +FS+YF A + I GR
Sbjct: 180 AHERTIHTDVLFGIVKGAQISRKDKGMLPLKIVVMSATLEAHQFSEYFGSAEVLYIEGRQ 239
Query: 167 FPVEVLYTKEPETDYLDASLITVMQIHLKGPRG 265
PVE++Y EP+ DY+ A+LIT+MQ+H + P G
Sbjct: 240 HPVELMYAVEPQVDYMHAALITIMQLHQEKPLG 272
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/91 (48%), Positives = 68/91 (74%)
Frame = +1
Query: 235 HADPPEGPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRI 414
H + P G GDIL+FLTGQ+EI++ +++ + PD P+L++ P+++ALPS Q ++
Sbjct: 266 HQEKPLG--GDILVFLTGQDEIESLSKLVSDCSLHCPPDCPQLLVCPMFAALPSSQQMQV 323
Query: 415 FEPAPPGSRKVVIATNIAETSLTIDGIYYVV 507
F PA PG+RKV+++TNIAETS+TI G+ YV+
Sbjct: 324 FRPAIPGARKVILSTNIAETSVTIPGVKYVI 354
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 513 GFVKQKVYNSKTGMDSLVVTPIS 581
G+VK K ++ KTG+D L V P+S
Sbjct: 357 GYVKAKGFHPKTGLDMLRVQPVS 379
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 78.2 bits (184), Expect = 5e-15
Identities = 34/65 (52%), Positives = 48/65 (73%)
Frame = +2
Query: 56 VQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITV 235
V +R +LKLIVTSAT+DA KF+ +F P + IPGRTFPVE+ +T+ DY+D+++
Sbjct: 700 VSRRRDLKLIVTSATMDAQKFADFFGNVPTYKIPGRTFPVEIFFTRTVMEDYVDSAVKQA 759
Query: 236 MQIHL 250
+QIHL
Sbjct: 760 LQIHL 764
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = +1
Query: 349 DVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVV 507
+ P L +LP+YS LPS++Q +IF+ AP G RK V+ATNIAETSLT+DGI +V+
Sbjct: 776 EAPPLAVLPIYSQLPSDLQAKIFQKAPDGVRKCVVATNIAETSLTVDGIMFVI 828
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 513 GFVKQKVYNSKTGMDSLVVTPIS 581
G+ K KVYN K GMD+L V PIS
Sbjct: 831 GYCKLKVYNPKIGMDALQVYPIS 853
>SB_37839| Best HMM Match : HA2 (HMM E-Value=4e-21)
Length = 422
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 6/77 (7%)
Frame = +1
Query: 295 EIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPG------SRKVVIA 456
EI+ AC+ + + + +LG ++ EL +P+YS LP Q RIFE APP RK V+A
Sbjct: 101 EIEEACKRIKKEVDNLGSEIGELKCIPLYSTLPPTQQQRIFEAAPPDRPNGAIGRKCVVA 160
Query: 457 TNIAETSLTIDGIYYVV 507
TNIAETSLTIDG+ +V+
Sbjct: 161 TNIAETSLTIDGVVFVI 177
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 510 PGFVKQKVYNSKTGMDSLVVTPIS 581
PGF KQKVYN + ++SL+V+ IS
Sbjct: 179 PGFSKQKVYNPRIRVESLLVSAIS 202
>SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09)
Length = 185
Score = 74.5 bits (175), Expect = 6e-14
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +1
Query: 289 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIA 468
QEE+++A L ER + + L +LP+YS LP E Q +F+ PP +RKV++ATN+A
Sbjct: 81 QEEVESAVSKLIERARGMPKGSSYLKVLPMYSGLPYEEQMLVFKRPPPNTRKVIVATNVA 140
Query: 469 ETSLTIDGIYY 501
E S+TIDGI Y
Sbjct: 141 EASITIDGIVY 151
Score = 34.7 bits (76), Expect = 0.056
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2
Query: 59 QKRPELKLIVTSATLDAVKFSQYF 130
+KRP+L++IV+SATLDA F +F
Sbjct: 39 KKRPDLRIIVSSATLDAEMFKDFF 62
>SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06)
Length = 368
Score = 74.1 bits (174), Expect = 7e-14
Identities = 31/64 (48%), Positives = 47/64 (73%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVL 184
HERT +D L +L+ + +RP+L++I+ SATLD+ FS+YF++AP+ IPGRTFPV
Sbjct: 102 HERTEESDFLMMVLRDLIMERPDLRVILMSATLDSKLFSEYFYDAPVIHIPGRTFPVHEY 161
Query: 185 YTKE 196
Y ++
Sbjct: 162 YLED 165
>SB_38249| Best HMM Match : HA2 (HMM E-Value=1.6e-26)
Length = 355
Score = 68.5 bits (160), Expect = 4e-12
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Frame = +1
Query: 253 GPPGDILLFLTGQEEIDTACEILYERMKSLGPD--VPELIILPVYSALPSEMQTRIFEPA 426
G PG +L+FL G I L++ +K + P P +LP++S +P E Q R+FEP
Sbjct: 42 GIPGAVLIFLPGWNLIFA----LHKHLK-MHPQFGTPNYRLLPLHSQIPREDQRRVFEPV 96
Query: 427 PPGSRKVVIATNIAETSLTIDGIYYVV 507
P G K++++TNIAETS+TID + +V+
Sbjct: 97 PEGVTKIILSTNIAETSITIDDVVFVI 123
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 65.3 bits (152), Expect = 3e-11
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +1
Query: 259 PGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGS 438
PGD+L+FLT EID A + ++ L E+I LP++ L E Q ++F+ P G
Sbjct: 908 PGDVLVFLTCPAEIDRAVTKVCSKVNPL-----EVICLPLHGKLLQEDQQKVFQQFP-GK 961
Query: 439 RKVVIATNIAETSLTIDGIYYVV 507
RKVV +TN AETS+TI G+ +VV
Sbjct: 962 RKVVFSTNCAETSITIPGVKFVV 984
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Frame = +2
Query: 83 IVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTK-----EPETDYLDASLITVMQIH 247
I+TSAT++ F YF +P+ + GRTFPVEV++ + +DY+ ++ V++IH
Sbjct: 844 IITSATINPKLFQDYFGGSPVVEVSGRTFPVEVVWKQGDSSLNSGSDYVSEAIEKVLEIH 903
>SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22)
Length = 354
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/64 (43%), Positives = 44/64 (68%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVL 184
HER + +D L +++ + +RP+LKL++ SATL+A FS YF + P+ IPG T+PV+
Sbjct: 97 HERDLMSDFLLIIIRDLLPRRPDLKLVLMSATLNAEIFSTYFGKCPMLHIPGFTYPVKEF 156
Query: 185 YTKE 196
Y +E
Sbjct: 157 YIEE 160
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +1
Query: 400 MQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVALASLNRK 531
+ +F+ P G RK+VIATNIAETS+TID + +VV + K
Sbjct: 197 LNMEVFDRPPLGVRKIVIATNIAETSITIDDVVFVVDCGKVKEK 240
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = +1
Query: 361 LIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVALASLNRK 531
+ +LP+YS L S+ Q ++F+ +P G+R V+ATN+AETSLTI I YVV + R+
Sbjct: 597 MYVLPLYSLLSSKEQAKVFQQSPGGARLCVVATNVAETSLTIPNIKYVVDTGMVKRR 653
Score = 58.0 bits (134), Expect = 5e-09
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 8/96 (8%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRP----ELKLIVTSATL---DAVKFSQYFFEAPI-FTIP 157
AHER+++TD+L GLL + V R +LKL++ SATL D ++ F + PI +
Sbjct: 415 AHERSVYTDILIGLLSRIVPLRAKQGNKLKLVIMSATLRVEDFTSNTKLFPDPPITIKVD 474
Query: 158 GRTFPVEVLYTKEPETDYLDASLITVMQIHLKGPRG 265
R FPV V ++K DY+ + V +IH P G
Sbjct: 475 SRQFPVTVHFSKRTPDDYIQEAFRKVCKIHRTLPSG 510
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 256 PPGDILLFLTGQEEIDTACEIL 321
P G ILLF+TGQ EI C L
Sbjct: 508 PSGGILLFVTGQNEIHGLCRKL 529
>SB_52252| Best HMM Match : DEAD (HMM E-Value=0.96)
Length = 363
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVL 184
HER +D L L++ + +KL++ SA LD F +YF + P+ +PGR F V+VL
Sbjct: 97 HERDRFSDFLLISLRELLSFNKNIKLVLMSAALDIDLFVEYFGKCPVINVPGRCFDVDVL 156
Query: 185 YTKE 196
+ ++
Sbjct: 157 FLED 160
>SB_6014| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 26/31 (83%)
Frame = +1
Query: 412 IFEPAPPGSRKVVIATNIAETSLTIDGIYYV 504
+F+ AP G RK +++TNIAETS+TIDGI ++
Sbjct: 1 VFDVAPDGVRKCIVSTNIAETSITIDGIRFI 31
>SB_6592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1228
Score = 34.3 bits (75), Expect = 0.074
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 322 YERMKSLGPDVPELIILPVYS-ALPSEMQTRIFEP-APPGSRKVVIATNIAETS 477
YE +K+L PD+P L + P + A + + +P +PPG +V T +A S
Sbjct: 88 YEEVKTLSPDIPALALYPSLNIANKQSLHRTLSDPGSPPGHTQVCQETEVAPAS 141
>SB_55153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.5 bits (68), Expect = 0.52
Identities = 17/73 (23%), Positives = 36/73 (49%)
Frame = -1
Query: 228 ISEASK*SVSGSLVYKTSTGKVRPGMVKIGASKKYCENLTASSVADVTMSLSSGRFCTAC 49
++ ASK ++ + V + + G RP V + ++ ++ + VTMS++ T
Sbjct: 23 VARASKVTMGVARVKRVTMGVARPNKVTMSVARPNKVTMSVARPNKVTMSVARPNKVTMS 82
Query: 48 FSRPNSTSVWMVR 10
+RPN ++ + R
Sbjct: 83 VARPNKVTISVAR 95
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/73 (21%), Positives = 34/73 (46%)
Frame = -1
Query: 228 ISEASK*SVSGSLVYKTSTGKVRPGMVKIGASKKYCENLTASSVADVTMSLSSGRFCTAC 49
++ +K ++S + K + RP V I ++ ++ + VTMS++ T
Sbjct: 63 VARPNKVTMSVARPNKVTMSVARPNKVTISVARPNKVTMSVARPNKVTMSVARANKVTMS 122
Query: 48 FSRPNSTSVWMVR 10
+RPN ++ + R
Sbjct: 123 VARPNKVTMSVAR 135
>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 31.1 bits (67), Expect = 0.69
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 8/48 (16%)
Frame = +2
Query: 77 KLIVTSATLDAVKFSQYFFE--------APIFTIPGRTFPVEVLYTKE 196
++++ SATL++ FS+YF AP+F + G FPV+ Y ++
Sbjct: 197 EVVLMSATLESDLFSRYFAMPIRGQLEGAPVFAVEGNIFPVQEYYLED 244
>SB_20317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 30.7 bits (66), Expect = 0.91
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Frame = +2
Query: 80 LIVTSATLDAVKFSQYFFE--------APIFTIPGRTFPVEVLYTKE 196
+++ SATL++ FS+YF AP+F + G FPV+ Y ++
Sbjct: 1 VVLMSATLESDLFSRYFAMPIRGQLEGAPVFAVEGNIFPVQEYYLED 47
>SB_2642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -3
Query: 181 DFDGEGSTGDGEDRGLEEVLRELDGVERGGRDDELEFGALLHGLLQQTEQHVGVDG 14
D D G GD +D G++ + DGV+ G DD+ + ++ G + VG DG
Sbjct: 2 DDDDVGGDGDDDDDGVDGDGNDDDGVDDDGDDDDDDDDDVVDG-NDDDDDDVGGDG 56
>SB_1344| Best HMM Match : HGTP_anticodon (HMM E-Value=4.4)
Length = 168
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +1
Query: 292 EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAE 471
EE+++ L + P V EL+ +P+ + L EM+ ++++ +R+ + T+ +E
Sbjct: 83 EEMNSLVNKLLSQNPDDRPSVQELLEMPILATLGKEMEKKVWQ-LNSSTRRARLVTHSSE 141
Query: 472 T 474
T
Sbjct: 142 T 142
>SB_581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 425
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 338 DFILSYNISHAVSISSWPVRNSRI 267
D+ LSY SH +I ++P+RN RI
Sbjct: 178 DWTLSYEGSHRSTICAYPLRNERI 201
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 467 AMLVAITTFLEPG-GAGSKIRVCISDGSAEYTGRIISSGTSGP-KDFILSYNISH 309
A+LV I+ +P A K+ + DG RI++ GP D SYN ++
Sbjct: 662 ALLVLISYGQDPSQAAADKLNAALHDGDTVTVARIVAGTQQGPLADLEASYNATY 716
>SB_10592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 190 GVQDFDGEGST-GDGEDRGLEEVLRELDGVERGGRDDELEFGALLHGLLQQTEQHVGVDG 14
G D DG+ GDG+D G ++V + DG + DD+ + ++ ++ + VDG
Sbjct: 6 GDDDDDGDDDVYGDGDDDGDDDVYGDDDGGDDDDDDDDDDGDEVMVMMMYDIYDNDDVDG 65
>SB_38704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 393 RQRRVHRQNYQLRHVRPQGLHSLVQYLTRRVNLF 292
++R ++ +YQ ++VRP + +YL R LF
Sbjct: 47 KRRLSYKHHYQFQNVRPNKVLEAAKYLVRTSELF 80
>SB_1256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 247 PEGPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTR 411
P GD+L+FL+G EI + E + I+LP++S+L + Q +
Sbjct: 2 PPTERGDLLIFLSGMSEISAVVDAAREYAQR----TRRWIVLPLHSSLSVDEQDK 52
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.137 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,740,672
Number of Sequences: 59808
Number of extensions: 392856
Number of successful extensions: 1526
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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