Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0195
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 162 1e-40
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 162 1e-40
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 125 3e-29
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 125 3e-29
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 125 3e-29
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 107 4e-24
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 107 4e-24
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 106 1e-23
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 106 1e-23
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 89 2e-18
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 78 4e-15
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 68 4e-12
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 67 7e-12
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 62 3e-10
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 57 8e-09
AC084159-1|AAK39368.1| 223|Caenorhabditis elegans Hypothetical ... 38 0.007
AC006708-24|AAF60413.1| 660|Caenorhabditis elegans Hypothetical... 31 0.79
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 29 1.8
AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical ... 29 1.8
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 29 1.8
AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical ... 28 4.2
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 28 5.6
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 28 5.6
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 28 5.6
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 28 5.6
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 28 5.6
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 28 5.6
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 28 5.6
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z69885-5|CAA93756.2| 882|Caenorhabditis elegans Hypothetical pr... 27 7.4
AY064464-1|AAL40874.1| 882|Caenorhabditis elegans minibrain kin... 27 7.4
AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical ... 27 7.4
U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical pr... 27 9.7
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 162 bits (394), Expect = 1e-40
Identities = 74/84 (88%), Positives = 81/84 (96%)
Frame = +1
Query: 256 PPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPG 435
PPGD+L+FLTGQEEIDT+CE+LYERMKS+GPDVPELIILPVY ALPSEMQTRIF+PAP G
Sbjct: 747 PPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAG 806
Query: 436 SRKVVIATNIAETSLTIDGIYYVV 507
RKVVIATNIAETSLTIDGI+YVV
Sbjct: 807 KRKVVIATNIAETSLTIDGIFYVV 830
Score = 156 bits (379), Expect = 9e-39
Identities = 72/88 (81%), Positives = 81/88 (92%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHERTIHTDVLFGLLK A +KRPELKLI+TSATLD+VKFS+YF EAPIFTIPGRTFPVE+
Sbjct: 662 AHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEI 721
Query: 182 LYTKEPETDYLDASLITVMQIHLKGPRG 265
LYT+EPE+DYL+A+ ITVMQIHL P G
Sbjct: 722 LYTREPESDYLEAAHITVMQIHLTEPPG 749
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 510 PGFVKQKVYNSKTGMDSLVVTPIS 581
PGFVKQK+YN K+GMDSLVVTPIS
Sbjct: 832 PGFVKQKIYNPKSGMDSLVVTPIS 855
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 162 bits (394), Expect = 1e-40
Identities = 74/84 (88%), Positives = 81/84 (96%)
Frame = +1
Query: 256 PPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPG 435
PPGD+L+FLTGQEEIDT+CE+LYERMKS+GPDVPELIILPVY ALPSEMQTRIF+PAP G
Sbjct: 747 PPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAG 806
Query: 436 SRKVVIATNIAETSLTIDGIYYVV 507
RKVVIATNIAETSLTIDGI+YVV
Sbjct: 807 KRKVVIATNIAETSLTIDGIFYVV 830
Score = 156 bits (379), Expect = 9e-39
Identities = 72/88 (81%), Positives = 81/88 (92%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHERTIHTDVLFGLLK A +KRPELKLI+TSATLD+VKFS+YF EAPIFTIPGRTFPVE+
Sbjct: 662 AHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEI 721
Query: 182 LYTKEPETDYLDASLITVMQIHLKGPRG 265
LYT+EPE+DYL+A+ ITVMQIHL P G
Sbjct: 722 LYTREPESDYLEAAHITVMQIHLTEPPG 749
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 510 PGFVKQKVYNSKTGMDSLVVTPIS 581
PGFVKQK+YN K+GMDSLVVTPIS
Sbjct: 832 PGFVKQKIYNPKSGMDSLVVTPIS 855
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 125 bits (301), Expect = 3e-29
Identities = 53/86 (61%), Positives = 71/86 (82%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHERT+HTD+LFGL+K + R +LKL+++SATLDA KFS +F +APIF IPGR FPV++
Sbjct: 487 AHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDI 546
Query: 182 LYTKEPETDYLDASLITVMQIHLKGP 259
YT+ PE DY+DA+++T+MQIHL P
Sbjct: 547 YYTQAPEADYVDAAIVTIMQIHLTQP 572
Score = 118 bits (284), Expect = 3e-27
Identities = 56/83 (67%), Positives = 68/83 (81%)
Frame = +1
Query: 259 PGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGS 438
PGDIL+FLTGQEEI+T E L ER K+LG + ELI LPVY+ LPS++Q +IFEP P +
Sbjct: 574 PGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDA 633
Query: 439 RKVVIATNIAETSLTIDGIYYVV 507
RKVV+ATNIAETS+TIDGI YV+
Sbjct: 634 RKVVLATNIAETSVTIDGINYVI 656
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 125 bits (301), Expect = 3e-29
Identities = 53/86 (61%), Positives = 71/86 (82%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHERT+HTD+LFGL+K + R +LKL+++SATLDA KFS +F +APIF IPGR FPV++
Sbjct: 487 AHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDI 546
Query: 182 LYTKEPETDYLDASLITVMQIHLKGP 259
YT+ PE DY+DA+++T+MQIHL P
Sbjct: 547 YYTQAPEADYVDAAIVTIMQIHLTQP 572
Score = 118 bits (284), Expect = 3e-27
Identities = 56/83 (67%), Positives = 68/83 (81%)
Frame = +1
Query: 259 PGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGS 438
PGDIL+FLTGQEEI+T E L ER K+LG + ELI LPVY+ LPS++Q +IFEP P +
Sbjct: 574 PGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDA 633
Query: 439 RKVVIATNIAETSLTIDGIYYVV 507
RKVV+ATNIAETS+TIDGI YV+
Sbjct: 634 RKVVLATNIAETSVTIDGINYVI 656
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 125 bits (301), Expect = 3e-29
Identities = 53/86 (61%), Positives = 71/86 (82%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHERT+HTD+LFGL+K + R +LKL+++SATLDA KFS +F +APIF IPGR FPV++
Sbjct: 487 AHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDI 546
Query: 182 LYTKEPETDYLDASLITVMQIHLKGP 259
YT+ PE DY+DA+++T+MQIHL P
Sbjct: 547 YYTQAPEADYVDAAIVTIMQIHLTQP 572
Score = 118 bits (284), Expect = 3e-27
Identities = 56/83 (67%), Positives = 68/83 (81%)
Frame = +1
Query: 259 PGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGS 438
PGDIL+FLTGQEEI+T E L ER K+LG + ELI LPVY+ LPS++Q +IFEP P +
Sbjct: 574 PGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDA 633
Query: 439 RKVVIATNIAETSLTIDGIYYVV 507
RKVV+ATNIAETS+TIDGI YV+
Sbjct: 634 RKVVLATNIAETSVTIDGINYVI 656
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 107 bits (258), Expect = 4e-24
Identities = 44/83 (53%), Positives = 66/83 (79%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHERT+ TD+L GL+K+ V+ R ++K+++ SATLDA KF +YF + P+ ++PGRTFPVE+
Sbjct: 206 AHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEI 265
Query: 182 LYTKEPETDYLDASLITVMQIHL 250
+T E DYL+A++ TV+QIH+
Sbjct: 266 FFTPNAEKDYLEAAIRTVIQIHM 288
Score = 100 bits (240), Expect = 7e-22
Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 6/88 (6%)
Frame = +1
Query: 262 GDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPG-- 435
GDILLFLTGQEEI+ AC+ + +++LG D L +P+YS LP Q RIFEPAPP
Sbjct: 294 GDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRP 353
Query: 436 ----SRKVVIATNIAETSLTIDGIYYVV 507
SRK VI+TNIAETSLTIDG+ +V+
Sbjct: 354 NGAISRKCVISTNIAETSLTIDGVVFVI 381
Score = 35.1 bits (77), Expect = 0.037
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 510 PGFVKQKVYNSKTGMDSLVVTPIS 581
PGF KQKVYN + ++SL+V PIS
Sbjct: 383 PGFSKQKVYNPRIRVESLLVCPIS 406
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 107 bits (258), Expect = 4e-24
Identities = 44/83 (53%), Positives = 66/83 (79%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHERT+ TD+L GL+K+ V+ R ++K+++ SATLDA KF +YF + P+ ++PGRTFPVE+
Sbjct: 206 AHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEI 265
Query: 182 LYTKEPETDYLDASLITVMQIHL 250
+T E DYL+A++ TV+QIH+
Sbjct: 266 FFTPNAEKDYLEAAIRTVIQIHM 288
Score = 100 bits (240), Expect = 7e-22
Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 6/88 (6%)
Frame = +1
Query: 262 GDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPG-- 435
GDILLFLTGQEEI+ AC+ + +++LG D L +P+YS LP Q RIFEPAPP
Sbjct: 294 GDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRP 353
Query: 436 ----SRKVVIATNIAETSLTIDGIYYVV 507
SRK VI+TNIAETSLTIDG+ +V+
Sbjct: 354 NGAISRKCVISTNIAETSLTIDGVVFVI 381
Score = 35.1 bits (77), Expect = 0.037
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 510 PGFVKQKVYNSKTGMDSLVVTPIS 581
PGF KQKVYN + ++SL+V PIS
Sbjct: 383 PGFSKQKVYNPRIRVESLLVCPIS 406
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
protein K03H1.2 protein.
Length = 1131
Score = 106 bits (255), Expect = 1e-23
Identities = 50/89 (56%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYF-FEAPIFTIPGRTFPVE 178
AHER+++TDVLFGLL++ + KR +LKLIVTSAT+DA KF+ +F P FTIPGRTFPVE
Sbjct: 563 AHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVE 622
Query: 179 VLYTKEPETDYLDASLITVMQIHLKGPRG 265
+ + + P DY+DA++ + IHL G G
Sbjct: 623 LFHARTPVEDYVDAAVKQAVTIHLGGMDG 651
Score = 103 bits (247), Expect = 9e-23
Identities = 45/85 (52%), Positives = 65/85 (76%)
Frame = +1
Query: 253 GPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPP 432
G GDIL+F+ GQE+I+ CE++ E++ L + P L +LP+YS LPS++Q +IF+ AP
Sbjct: 648 GMDGDILIFMPGQEDIECTCEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPG 706
Query: 433 GSRKVVIATNIAETSLTIDGIYYVV 507
G RK ++ATNIAETSLT+DGI +V+
Sbjct: 707 GMRKAIVATNIAETSLTVDGILFVI 731
Score = 36.3 bits (80), Expect = 0.016
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 510 PGFVKQKVYNSKTGMDSLVVTPIS 581
PGF K KVYN + GMD+L + P+S
Sbjct: 733 PGFCKMKVYNPRIGMDALSIFPVS 756
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
determination protein MOG-1 protein.
Length = 1131
Score = 106 bits (255), Expect = 1e-23
Identities = 50/89 (56%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYF-FEAPIFTIPGRTFPVE 178
AHER+++TDVLFGLL++ + KR +LKLIVTSAT+DA KF+ +F P FTIPGRTFPVE
Sbjct: 563 AHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVE 622
Query: 179 VLYTKEPETDYLDASLITVMQIHLKGPRG 265
+ + + P DY+DA++ + IHL G G
Sbjct: 623 LFHARTPVEDYVDAAVKQAVTIHLGGMDG 651
Score = 103 bits (247), Expect = 9e-23
Identities = 45/85 (52%), Positives = 65/85 (76%)
Frame = +1
Query: 253 GPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPP 432
G GDIL+F+ GQE+I+ CE++ E++ L + P L +LP+YS LPS++Q +IF+ AP
Sbjct: 648 GMDGDILIFMPGQEDIECTCEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPG 706
Query: 433 GSRKVVIATNIAETSLTIDGIYYVV 507
G RK ++ATNIAETSLT+DGI +V+
Sbjct: 707 GMRKAIVATNIAETSLTVDGILFVI 731
Score = 36.3 bits (80), Expect = 0.016
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 510 PGFVKQKVYNSKTGMDSLVVTPIS 581
PGF K KVYN + GMD+L + P+S
Sbjct: 733 PGFCKMKVYNPRIGMDALSIFPVS 756
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 89.0 bits (211), Expect = 2e-18
Identities = 43/83 (51%), Positives = 58/83 (69%)
Frame = +1
Query: 259 PGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGS 438
PGDIL+FLTGQ+E++ CE L E +L + L ++P Y ALP+ Q + F+ P G+
Sbjct: 296 PGDILVFLTGQDEVEDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDSTPHGT 354
Query: 439 RKVVIATNIAETSLTIDGIYYVV 507
RKVV+ATNIAE S+TI GI YV+
Sbjct: 355 RKVVVATNIAEASITIPGICYVI 377
Score = 70.5 bits (165), Expect = 8e-13
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 10/92 (10%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYF----------FEAPIFT 151
AHER+ +TD+L GLL++ +Q R +L++IV+SATLDA F +F A I +
Sbjct: 200 AHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIIS 259
Query: 152 IPGRTFPVEVLYTKEPETDYLDASLITVMQIH 247
+ GRT PV V +TK DY +++ TV+ IH
Sbjct: 260 VEGRTHPVAVHHTKTSVPDYCQSAVDTVINIH 291
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical
protein T05E8.3 protein.
Length = 856
Score = 78.2 bits (184), Expect = 4e-15
Identities = 44/99 (44%), Positives = 57/99 (57%)
Frame = +1
Query: 235 HADPPEGPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRI 414
H P+G DIL+FLTG EEI+ L E SL L+ +P+Y+AL E Q
Sbjct: 374 HLTEPKGR--DILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEA 431
Query: 415 FEPAPPGSRKVVIATNIAETSLTIDGIYYVVALASLNRK 531
F P G+RKV+I+TNIAETS+TI GI V+ + K
Sbjct: 432 FRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTK 470
Score = 75.8 bits (178), Expect = 2e-14
Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 10/98 (10%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPE----LKLIVTSATLDAVKFSQYFFEAPIFTIPGRTF 169
AHER++H+DVL +L+Q +R E L+LI+ SATL A KF YF A + + GRTF
Sbjct: 283 AHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAGRTF 342
Query: 170 PVEVLYTKE------PETDYLDASLITVMQIHLKGPRG 265
P+EV + TDY+ ++I V +HL P+G
Sbjct: 343 PIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLTEPKG 380
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 68.1 bits (159), Expect = 4e-12
Identities = 37/93 (39%), Positives = 55/93 (59%)
Frame = +1
Query: 247 PEGPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPA 426
P GD L+FL G EI ++ E +K+ IIL ++S L E Q ++F+ A
Sbjct: 306 PSTQRGDALIFLNGVAEIS----MVAEHLKNYAELTNGWIILMLHSTLSVEEQDKVFDQA 361
Query: 427 PPGSRKVVIATNIAETSLTIDGIYYVVALASLN 525
P G RK +++TN+AETS+TIDGI +V+ +N
Sbjct: 362 PVGIRKCILSTNVAETSVTIDGIRFVIDSGKVN 394
Score = 64.1 bits (149), Expect = 7e-11
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVL 184
HER + +D+L GLL+ KR +LKLI+ SAT++ F YF AP+ +PGR FP++V
Sbjct: 212 HERHLTSDLLIGLLRDLCTKRDDLKLILMSATINLDLFKGYFEGAPVVQVPGRLFPIDVR 271
Query: 185 YTKEPETDYLDAS 223
+ P ++D S
Sbjct: 272 W--HPIKQFIDQS 282
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 67.3 bits (157), Expect = 7e-12
Identities = 37/85 (43%), Positives = 53/85 (62%)
Frame = +1
Query: 253 GPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPP 432
G G +L+FL G EI T C L E + + E ILP++S L S+ Q ++F P
Sbjct: 657 GVDGAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYE--ILPLHSQLTSQEQRKVFNHYP- 713
Query: 433 GSRKVVIATNIAETSLTIDGIYYVV 507
G RK++++TNIAETS+TID + YV+
Sbjct: 714 GKRKIIVSTNIAETSITIDDVVYVI 738
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFE------APIFTIPGRT 166
HER + TD + +L++ + +L++++ SAT+D F+ +F P+ T+ GRT
Sbjct: 507 HERDVDTDFVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSSIPDVGPTPVITMHGRT 566
Query: 167 FPVEVLYTKE 196
FPV+ Y ++
Sbjct: 567 FPVQSFYLED 576
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/91 (35%), Positives = 55/91 (60%)
Frame = +1
Query: 262 GDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSR 441
G IL+FL G E+I + + + K+ ++ +I+LP++S + S IF+ P +R
Sbjct: 645 GTILVFLPGYEDIQQMLKAI-DCWKNSLKNMKNVIVLPLHSQMTSINHGDIFKSVPKDTR 703
Query: 442 KVVIATNIAETSLTIDGIYYVVALASLNRKS 534
K+++ATNIAE S+TI+ + +VV + KS
Sbjct: 704 KIILATNIAEASITIEDVIFVVDTGKVKEKS 734
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDA--VKFSQYF--FEAPIFTIPGRTFP 172
HER I+TD L L++ ++ RP+LK+I+ SAT++ FS YF + I R F
Sbjct: 306 HEREINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLFSNYFENHSMDVIRIESRAFD 365
Query: 173 VEVLY 187
V+V Y
Sbjct: 366 VKVFY 370
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 57.2 bits (132), Expect = 8e-09
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +1
Query: 349 DVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVV 507
D L LP+YS L Q R+F+ P G R VI+TN+AETSLTI G+ YV+
Sbjct: 571 DCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVI 623
Score = 47.6 bits (108), Expect = 6e-06
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPE----LKLIVTSATLDAVKFSQY----FFEAPIFTIP 157
AHER++++DVL G+L + V R + L+L++ SATL F+ + +
Sbjct: 357 AHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFTHKKLFPLLTPKVIKVD 416
Query: 158 GRTFPVEVLYTKEPETDYLDASLITVMQIHLKGPRG 265
R FPV V + K DY+ ++ +IH P G
Sbjct: 417 ARQFPVSVHFEKRTPDDYIASAFRKTCRIHETLPPG 452
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 256 PPGDILLFLTGQEEI 300
PPG IL+F+TGQ E+
Sbjct: 450 PPGAILVFVTGQHEV 464
>AC084159-1|AAK39368.1| 223|Caenorhabditis elegans Hypothetical
protein Y73B3A.21 protein.
Length = 223
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +1
Query: 259 PGDILLFLTGQEEIDTACEILYE 327
PGDIL+FLTGQ+E++ CE L E
Sbjct: 166 PGDILVFLTGQDEVEDVCEKLRE 188
>AC006708-24|AAF60413.1| 660|Caenorhabditis elegans Hypothetical
protein Y110A7A.19 protein.
Length = 660
Score = 30.7 bits (66), Expect = 0.79
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 238 ADPPEGPPGDI-LLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVY 381
ADP + P + LL + E+ +C ILYERM+S DV E + L ++
Sbjct: 111 ADPLQVEPTENNLLKMISSREVKDSC-ILYERMRSENVDVSEKVQLELF 158
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 313 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLT 483
+++YE+MK+L E + PV +ALP R +P V+ + +AE+ LT
Sbjct: 339 QVIYEKMKALVVKALETGV-PVLAALPPMAADRHHIASPAAPESVIPSPIMAESELT 394
>AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical
protein Y75B8A.7 protein.
Length = 648
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -3
Query: 187 VQDFDGEGSTGDGEDRGLEEVLRELDGVERGGRDDELE 74
+QD +G DG D G EE ELD E D+ELE
Sbjct: 102 IQDSEGSEDGSDGSDGGSEE---ELDDDEEELEDEELE 136
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 313 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLT 483
+++YE+MK+L E + PV +ALP R +P V+ + +AE+ LT
Sbjct: 339 QVIYEKMKALVVKALETGV-PVLAALPPMAADRHHIASPAAPESVIPSPIMAESELT 394
>AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical
protein B0041.2a protein.
Length = 706
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = -1
Query: 459 GGDHHL-PGAGGRRLEDPGLHLGR-QRRVHR--QNYQLRH-VRPQGLHSLVQY 316
GG HH+ G GGRR G+H R Q+ H N + H RPQ + QY
Sbjct: 12 GGPHHMNGGGGGRRGGGGGMHNQRIQQNPHHGGMNRMMPHGFRPQQGQFMPQY 64
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 433 GSRKVVIATNIAETSLTIDGIYYVV 507
GS+ V+IAT +AE L I G+ +V+
Sbjct: 655 GSKPVLIATAVAERGLDIKGVDHVI 679
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 433 GSRKVVIATNIAETSLTIDGIYYVV 507
GS+ V+IAT +AE L I G+ +V+
Sbjct: 866 GSKPVLIATAVAERGLDIKGVDHVI 890
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 433 GSRKVVIATNIAETSLTIDGIYYVV 507
GS+ V+IAT +AE L I G+ +V+
Sbjct: 866 GSKPVLIATAVAERGLDIKGVDHVI 890
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 433 GSRKVVIATNIAETSLTIDGIYYVV 507
GS+ V+IAT +AE L I G+ +V+
Sbjct: 655 GSKPVLIATAVAERGLDIKGVDHVI 679
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 178 FDGEGSTGDGEDRGLEEVLRELDGVERGGRDDELEF 71
FD E S DGED +E E +G + DDE F
Sbjct: 721 FDDEASESDGEDEFEDEDEEEPEGEDLEDSDDERLF 756
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 433 GSRKVVIATNIAETSLTIDGIYYVV 507
GS+ V+IAT +AE L I G+ +V+
Sbjct: 655 GSKPVLIATAVAERGLDIKGVDHVI 679
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 433 GSRKVVIATNIAETSLTIDGIYYVV 507
GS+ V+IAT +AE L I G+ +V+
Sbjct: 866 GSKPVLIATAVAERGLDIKGVDHVI 890
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -3
Query: 379 TPAELSAPARPAPRTS--FSRTISHTPCQSLLGQ*GTAGYPPGALQ 248
TP+E S A PAPR S F R I T LL + ++G P +L+
Sbjct: 106 TPSEPSREASPAPRLSSPFERIIDET--TELLAKCASSGPPDHSLR 149
>Z69885-5|CAA93756.2| 882|Caenorhabditis elegans Hypothetical
protein T04C10.1 protein.
Length = 882
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 510 GHHVVYTVDGQRRLRDVGGDHHLPGAGGRRLEDPG 406
G+ Y G R+L ++ G G GGRRL +PG
Sbjct: 580 GYRHTYKAPGARKLHEILGVTS-GGPGGRRLGEPG 613
>AY064464-1|AAL40874.1| 882|Caenorhabditis elegans minibrain kinase
protein.
Length = 882
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 510 GHHVVYTVDGQRRLRDVGGDHHLPGAGGRRLEDPG 406
G+ Y G R+L ++ G G GGRRL +PG
Sbjct: 580 GYRHTYKAPGARKLHEILGVTS-GGPGGRRLGEPG 613
>AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical
protein B0041.2b protein.
Length = 624
Score = 27.5 bits (58), Expect = 7.4
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = -1
Query: 459 GGDHHL-PGAGGRRLEDPGLHLGR-QRRVHR--QNYQLRH-VRPQGLH 331
GG HH+ G GGRR G+H R Q+ H N + H RPQ H
Sbjct: 12 GGPHHMNGGGGGRRGGGGGMHNQRIQQNPHHGGMNRMMPHGFRPQQGH 59
>U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical
protein C34F11.8 protein.
Length = 223
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 136 GPDLHHPRSNLPRRSLVHQGTGDGLFGRLTDHGHADPP 249
GPD H+ PR G G G +G + +G++ P
Sbjct: 127 GPDYHYHYHEAPRYGYSRYGDGYGRYGPYSGYGNSYYP 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.137 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,673,333
Number of Sequences: 27780
Number of extensions: 283770
Number of successful extensions: 1102
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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