Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0195
(582 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g26560.1 68416.m03315 ATP-dependent RNA helicase, putative si... 150 6e-37
At1g32490.1 68414.m04009 RNA helicase, putative similar to ATP-d... 121 4e-28
At2g47250.1 68415.m05900 RNA helicase, putative similar to SP|P5... 120 9e-28
At3g62310.1 68416.m07000 RNA helicase, putative similar to SP|P5... 119 2e-27
At2g35340.1 68415.m04333 RNA helicase, putative similar to ATP-d... 118 3e-27
At5g13010.1 68418.m01491 RNA helicase, putative similar to DEAH-... 112 1e-25
At4g16680.1 68417.m02519 RNA helicase, putative similar to SP|Q1... 109 1e-24
At1g26370.1 68414.m03217 RNA helicase, putative similar to SP|Q1... 103 9e-23
At4g18465.1 68417.m02740 RNA helicase, putative similar to SP|Q1... 95 3e-20
At1g27900.1 68414.m03419 RNA helicase, putative similar to SP|Q1... 94 5e-20
At5g10370.1 68418.m01203 helicase domain-containing protein / IB... 74 8e-14
At2g35920.1 68415.m04409 helicase domain-containing protein simi... 74 8e-14
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 70 1e-12
At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to ... 67 9e-12
At1g58060.1 68414.m06580 helicase domain-containing protein cont... 66 2e-11
At2g30800.1 68415.m03755 DEIH-box RNA/DNA helicase, putative sim... 65 3e-11
At1g48650.1 68414.m05445 helicase domain-containing protein cont... 64 9e-11
At1g58050.1 68414.m06579 helicase domain-containing protein cont... 62 3e-10
At2g01130.1 68415.m00021 helicase domain-containing protein simi... 60 1e-09
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 55 3e-08
At5g04895.1 68418.m00514 helicase domain-containing protein simi... 46 2e-05
At2g47680.1 68415.m05955 zinc finger (CCCH type) helicase family... 40 0.001
At5g57110.2 68418.m07131 calcium-transporting ATPase 8, plasma m... 31 0.56
At5g57110.1 68418.m07130 calcium-transporting ATPase 8, plasma m... 31 0.56
At5g06400.1 68418.m00716 pentatricopeptide (PPR) repeat-containi... 29 1.7
At5g55680.1 68418.m06942 glycine-rich protein 29 3.0
At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related ... 28 4.0
At4g02010.1 68417.m00271 protein kinase family protein contains ... 28 5.2
At2g35350.1 68415.m04334 protein phosphatase 2C family protein /... 28 5.2
At1g70100.3 68414.m08067 expressed protein 28 5.2
At1g70100.2 68414.m08066 expressed protein 28 5.2
At1g70100.1 68414.m08065 expressed protein 28 5.2
At5g50410.1 68418.m06243 expressed protein 27 6.9
At5g41620.1 68418.m05057 expressed protein weak similarity to mi... 27 6.9
At5g15020.1 68418.m01761 paired amphipathic helix repeat-contain... 27 6.9
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 27 6.9
At4g04500.1 68417.m00653 protein kinase family protein contains ... 27 6.9
At2g21680.1 68415.m02579 kelch repeat-containing F-box family pr... 27 6.9
At1g80030.3 68414.m09368 DNAJ heat shock protein, putative simil... 27 6.9
At1g80030.2 68414.m09367 DNAJ heat shock protein, putative simil... 27 6.9
At1g80030.1 68414.m09366 DNAJ heat shock protein, putative simil... 27 6.9
At1g55540.1 68414.m06356 proline-rich family protein contains pr... 27 6.9
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 27 9.1
At4g30180.1 68417.m04291 expressed protein 27 9.1
At3g09350.1 68416.m01109 armadillo/beta-catenin repeat family pr... 27 9.1
At1g01930.1 68414.m00111 zinc finger protein-related contains Pf... 27 9.1
>At3g26560.1 68416.m03315 ATP-dependent RNA helicase, putative
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00575: S1 RNA binding domain
Length = 1168
Score = 150 bits (364), Expect = 6e-37
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +1
Query: 256 PPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPG 435
P GDIL+FLTGQEEID+AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIF+P PPG
Sbjct: 722 PEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPG 781
Query: 436 SRKVVIATNIAETSLTIDGIYYVV 507
RKVV+ATNIAE SLTIDGIYYVV
Sbjct: 782 KRKVVVATNIAEASLTIDGIYYVV 805
Score = 146 bits (354), Expect = 9e-36
Identities = 68/88 (77%), Positives = 78/88 (88%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHERTIHTDVLFGLLK+ +++R +L+LIVTSATLDA KFS YFF IFTIPGRTFPVE+
Sbjct: 637 AHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEI 696
Query: 182 LYTKEPETDYLDASLITVMQIHLKGPRG 265
LYTK+PETDYLDA+LITV+QIHL P G
Sbjct: 697 LYTKQPETDYLDAALITVLQIHLTEPEG 724
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3
Query: 510 PGFVKQKVYNSKTGMDSLVVTPIS 581
PGF KQ VYN K G++SLV+TPIS
Sbjct: 807 PGFAKQNVYNPKQGLESLVITPIS 830
>At1g32490.1 68414.m04009 RNA helicase, putative similar to
ATP-dependent RNA helicase #3 [Homo sapiens] GI:3107913;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1044
Score = 121 bits (291), Expect = 4e-28
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +1
Query: 256 PPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPG 435
P GDIL+F TGQEEI+TA EIL R++ LG + ELII P+Y+ LPSE+Q +IFEP P G
Sbjct: 611 PLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEG 670
Query: 436 SRKVVIATNIAETSLTIDGIYYVV 507
+RKVV+ATNIAETSLTIDGI YVV
Sbjct: 671 ARKVVLATNIAETSLTIDGIKYVV 694
Score = 120 bits (290), Expect = 5e-28
Identities = 50/88 (56%), Positives = 70/88 (79%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHERT+ TD+LFGL+K + RP+LKL+++SAT+DA KFS YF APIF+ PGR +PVE+
Sbjct: 526 AHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEI 585
Query: 182 LYTKEPETDYLDASLITVMQIHLKGPRG 265
YT PE DY+DA+++T++ IH++ P G
Sbjct: 586 NYTSAPEADYMDAAIVTILTIHVREPLG 613
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 510 PGFVKQKVYNSKTGMDSLVVTPIS 581
PGF K K YN +TGM+SL++TPIS
Sbjct: 696 PGFSKMKSYNPRTGMESLLITPIS 719
>At2g47250.1 68415.m05900 RNA helicase, putative similar to
SP|P53131 Pre-mRNA splicing factor RNA helicase PRP43
(Helicase JA1) {Saccharomyces cerevisiae}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 729
Score = 120 bits (288), Expect = 9e-28
Identities = 53/88 (60%), Positives = 70/88 (79%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHERT+ TDVLFGLLK+ ++ RP+LKL+V SATL+A KF +YF AP+ +PGR PVE+
Sbjct: 193 AHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEI 252
Query: 182 LYTKEPETDYLDASLITVMQIHLKGPRG 265
YT+EPE DYL+A++ TV+QIH+ P G
Sbjct: 253 FYTQEPERDYLEAAIRTVVQIHMCEPPG 280
Score = 103 bits (247), Expect = 9e-23
Identities = 49/91 (53%), Positives = 66/91 (72%), Gaps = 7/91 (7%)
Frame = +1
Query: 256 PPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAP-- 429
PPGDIL+FLTG+EEI+ AC + + + +LG V + ++P+YS LP MQ +IF+PAP
Sbjct: 278 PPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVP 337
Query: 430 -----PGSRKVVIATNIAETSLTIDGIYYVV 507
P RK+V++TNIAETSLTIDGI YV+
Sbjct: 338 LTEGGPAGRKIVVSTNIAETSLTIDGIVYVI 368
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 510 PGFVKQKVYNSKTGMDSLVVTPIS 581
PGF KQKVYN + ++SL+V+PIS
Sbjct: 370 PGFAKQKVYNPRIRVESLLVSPIS 393
>At3g62310.1 68416.m07000 RNA helicase, putative similar to
SP|P53131 Pre-mRNA splicing factor RNA helicase PRP43
(Helicase JA1) {Saccharomyces cerevisiae}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 726
Score = 119 bits (286), Expect = 2e-27
Identities = 53/88 (60%), Positives = 69/88 (78%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHERT+ TDVLFGLLK+ ++ RP+LKL+V SATL+A KF YF AP+ +PGR PVE+
Sbjct: 189 AHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEI 248
Query: 182 LYTKEPETDYLDASLITVMQIHLKGPRG 265
YT+EPE DYL+A++ TV+QIH+ P G
Sbjct: 249 FYTQEPERDYLEAAIRTVVQIHMCEPPG 276
Score = 102 bits (244), Expect = 2e-22
Identities = 49/91 (53%), Positives = 66/91 (72%), Gaps = 7/91 (7%)
Frame = +1
Query: 256 PPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAP-- 429
PPGDIL+FLTG+EEI+ AC + + + +LG V + ++P+YS LP MQ +IF+PAP
Sbjct: 274 PPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEP 333
Query: 430 -----PGSRKVVIATNIAETSLTIDGIYYVV 507
P RK+V++TNIAETSLTIDGI YV+
Sbjct: 334 VTEGGPPGRKIVVSTNIAETSLTIDGIVYVI 364
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 510 PGFVKQKVYNSKTGMDSLVVTPIS 581
PGF KQKVYN + ++SL+V+PIS
Sbjct: 366 PGFAKQKVYNPRIRVESLLVSPIS 389
>At2g35340.1 68415.m04333 RNA helicase, putative similar to
ATP-dependent RNA helicase #3 [Homo sapiens] GI:3107913;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1110
Score = 118 bits (284), Expect = 3e-27
Identities = 49/88 (55%), Positives = 69/88 (78%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHERT+ TD+LFGL+K + RP+LKL+++SAT+DA KFS +F +APIF PGR +PV++
Sbjct: 592 AHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDI 651
Query: 182 LYTKEPETDYLDASLITVMQIHLKGPRG 265
+T PE DY+DA++ TV+ IH+K P G
Sbjct: 652 CFTTAPEADYMDAAITTVLTIHVKEPLG 679
Score = 112 bits (269), Expect = 2e-25
Identities = 53/84 (63%), Positives = 66/84 (78%)
Frame = +1
Query: 256 PPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPG 435
P GD+L+FL GQEEI+ E L +++ LG + ELII P+Y+ LPSE+Q +IFEP P G
Sbjct: 677 PLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEG 736
Query: 436 SRKVVIATNIAETSLTIDGIYYVV 507
+RKVV+ATNIAETSLTIDGI YVV
Sbjct: 737 ARKVVLATNIAETSLTIDGIKYVV 760
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3
Query: 510 PGFVKQKVYNSKTGMDSLVVTPIS 581
PGF K K YN +TGM+SL+VTPIS
Sbjct: 762 PGFSKMKSYNPRTGMESLLVTPIS 785
>At5g13010.1 68418.m01491 RNA helicase, putative similar to DEAH-box
RNA helicase [Chlamydomonas reinhardtii] GI:12044832;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1226
Score = 112 bits (270), Expect = 1e-25
Identities = 51/88 (57%), Positives = 67/88 (76%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHER+++TDVLFG+LK+ V +R + KLIVTSATL+A KFS +F PIF IPGRTFPV +
Sbjct: 651 AHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGRTFPVNI 710
Query: 182 LYTKEPETDYLDASLITVMQIHLKGPRG 265
LY+K P DY++A++ M IH+ P G
Sbjct: 711 LYSKTPCEDYVEAAVKQAMTIHITSPPG 738
Score = 109 bits (261), Expect = 2e-24
Identities = 49/88 (55%), Positives = 68/88 (77%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 PPGDILLFLTGQEEIDTACEILYERMKSL----GPDVPELIILPVYSALPSEMQTRIFEP 423
PPGDIL+F+TGQ+EI+ AC L ERM+ L ++ L+ILP+YS LP+++Q +IF+
Sbjct: 736 PPGDILIFMTGQDEIEAACFSLKERMEQLVSSSSREITNLLILPIYSQLPADLQAKIFQK 795
Query: 424 APPGSRKVVIATNIAETSLTIDGIYYVV 507
G+RK ++ATNIAETSLT+DGIYYV+
Sbjct: 796 PEDGARKCIVATNIAETSLTVDGIYYVI 823
Score = 30.7 bits (66), Expect = 0.74
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 513 GFVKQKVYNSKTGMDSLVVTPIS 581
G+ K KV+N + GMD+L V PIS
Sbjct: 826 GYGKMKVFNPRMGMDALQVFPIS 848
>At4g16680.1 68417.m02519 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 883
Score = 109 bits (263), Expect = 1e-24
Identities = 52/82 (63%), Positives = 64/82 (78%)
Frame = +1
Query: 262 GDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSR 441
GDIL+FLTGQEEI+T L RM LG E+II P+YS LP+ +Q ++FEPAP G+R
Sbjct: 431 GDILVFLTGQEEIETVETNLKRRMMDLGTKGSEIIICPIYSNLPTPLQAKVFEPAPKGTR 490
Query: 442 KVVIATNIAETSLTIDGIYYVV 507
KVV+ATNIAETSLTIDG+ YV+
Sbjct: 491 KVVLATNIAETSLTIDGVKYVI 512
Score = 103 bits (248), Expect = 7e-23
Identities = 47/82 (57%), Positives = 63/82 (76%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHERT+ TD+LF L+K + RP+L+LI++SATL+A KFS+YF A I+ IPGR +PVE
Sbjct: 344 AHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYFDSARIYLIPGRRYPVEK 403
Query: 182 LYTKEPETDYLDASLITVMQIH 247
L+ K PE DYL+ + TV+QIH
Sbjct: 404 LFRKCPEPDYLETVIRTVVQIH 425
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 480 DHRRYILRGGPGFVKQKVYNSKTGMDSLVVTPIS 581
D +Y++ PG+ K YN +TGM+SL+VTPIS
Sbjct: 506 DGVKYVI--DPGYCKINSYNPRTGMESLLVTPIS 537
>At1g26370.1 68414.m03217 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 717
Score = 103 bits (247), Expect = 9e-23
Identities = 47/86 (54%), Positives = 67/86 (77%)
Frame = +1
Query: 250 EGPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAP 429
E PGDIL+FLTGQ+EI++ ++ ER++++ D +L+ L ++SALPSE Q ++F PAP
Sbjct: 288 EEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAP 347
Query: 430 PGSRKVVIATNIAETSLTIDGIYYVV 507
G RKV++ATNIAETS+TI GI YV+
Sbjct: 348 TGFRKVILATNIAETSITIPGIRYVI 373
Score = 75.8 bits (178), Expect = 2e-14
Identities = 35/69 (50%), Positives = 48/69 (69%)
Frame = +2
Query: 59 QKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVM 238
+K LKLI+ SA+LDA FS+YF A + GR FPV++LYT PE+DY+DA+L+T+
Sbjct: 224 RKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVTIF 283
Query: 239 QIHLKGPRG 265
QIH + G
Sbjct: 284 QIHFEEKPG 292
Score = 31.5 bits (68), Expect = 0.42
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 489 RYILRGGPGFVKQKVYNSKTGMDSLVVTPIS 581
RY++ PGFVK + Y+ GM+SL V P S
Sbjct: 370 RYVI--DPGFVKARSYDPSKGMESLDVVPAS 398
Score = 31.1 bits (67), Expect = 0.56
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPE 73
AH+R++HTDVL LLK+ + R +
Sbjct: 164 AHDRSVHTDVLLALLKKIQRTRSQ 187
>At4g18465.1 68417.m02740 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 704
Score = 95.1 bits (226), Expect = 3e-20
Identities = 44/84 (52%), Positives = 60/84 (71%)
Frame = +1
Query: 256 PPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPG 435
PPGD+L+FLTGQE+I+TA ++L E S + L+ LP+YS L Q IF P P G
Sbjct: 283 PPGDVLVFLTGQEDIETAIKLLEEEAHSNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRG 342
Query: 436 SRKVVIATNIAETSLTIDGIYYVV 507
RKV+++TNIAETSLT++G+ YV+
Sbjct: 343 KRKVILSTNIAETSLTLEGVVYVI 366
Score = 62.5 bits (145), Expect = 2e-10
Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 26/114 (22%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQ---------KRPELKLIVTSATLDAVKFSQYF-------- 130
AHER+I TD+L GLLK+ Q +RPEL+LI++SAT++A S +F
Sbjct: 172 AHERSISTDILLGLLKKVSQSNTVLIIQRRRPELRLIISSATIEAKTMSNFFNSSKKRHA 231
Query: 131 ---------FEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLKGPRG 265
E I ++ GR F V++ Y +EP +DY+ + + T++ I+ + P G
Sbjct: 232 PEGSTPGPKLEPAILSVEGRGFSVKIHYVEEPVSDYIRSVVSTILLINEREPPG 285
Score = 31.1 bits (67), Expect = 0.56
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 513 GFVKQKVYNSKTGMDSLVVTPIS 581
GF KQK YN + ++SLVV PIS
Sbjct: 369 GFSKQKFYNPISDIESLVVAPIS 391
>At1g27900.1 68414.m03419 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 700
Score = 94.3 bits (224), Expect = 5e-20
Identities = 41/85 (48%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 PPGDILLFLTGQEEIDTACEILYERMKSLGP-DVPELIILPVYSALPSEMQTRIFEPAPP 432
P GDIL+F+TGQ++I+ L E+++SL + II P++ +LP EMQ R+F P PP
Sbjct: 212 PEGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPP 271
Query: 433 GSRKVVIATNIAETSLTIDGIYYVV 507
R+ +++TNIAETSLT+DG+ YV+
Sbjct: 272 NCRRFIVSTNIAETSLTVDGVVYVI 296
Score = 92.3 bits (219), Expect = 2e-19
Identities = 39/89 (43%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPE-LKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVE 178
AHER+++TD+L GL+K+ V+ R K+++TSATLD K S++F P+ +PG+ +PVE
Sbjct: 126 AHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYPVE 185
Query: 179 VLYTKEPETDYLDASLITVMQIHLKGPRG 265
+LY+KE Y+++SL + IH++ P G
Sbjct: 186 ILYSKERPVSYIESSLKVAIDIHVREPEG 214
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 513 GFVKQKVYNSKTGMDSLVVTPIS 581
G+VKQ+ YN +GM SL V IS
Sbjct: 299 GYVKQRQYNPSSGMFSLDVIQIS 321
>At5g10370.1 68418.m01203 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to RNA-dependent ATPase/helicase Cdc28p
[Schizosaccharomyces pombe] GI:1439562; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, weak hit
to PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1775
Score = 73.7 bits (173), Expect = 8e-14
Identities = 31/63 (49%), Positives = 47/63 (74%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHER+++TD+L LLK+ + +R +L+L++ SAT DA + SQYFF I + GR FPVE+
Sbjct: 429 AHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFPVEI 488
Query: 182 LYT 190
+Y+
Sbjct: 489 VYS 491
Score = 66.5 bits (155), Expect = 1e-11
Identities = 39/82 (47%), Positives = 48/82 (58%)
Frame = +1
Query: 262 GDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSR 441
G IL FLT Q E++ ACE P I LP++ L E Q R+F+ P G R
Sbjct: 525 GTILAFLTSQAEVEWACERFI---------TPSAIALPLHGKLSFEEQFRVFQNHP-GRR 574
Query: 442 KVVIATNIAETSLTIDGIYYVV 507
KV+ ATNIAETSLTI G+ YV+
Sbjct: 575 KVIFATNIAETSLTIPGVKYVI 596
>At2g35920.1 68415.m04409 helicase domain-containing protein similar
to DEIH-box RNA/DNA helicase [Arabidopsis thaliana]
GI:5881579; contains Pfam profiles PF04408: Helicase
associated domain (HA2), PF00271: Helicase conserved
C-terminal domain
Length = 995
Score = 73.7 bits (173), Expect = 8e-14
Identities = 36/82 (43%), Positives = 54/82 (65%)
Frame = +1
Query: 262 GDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSR 441
G IL+FLTG +EI E + M + D + ++LP++ ++P+ Q IF+ PP R
Sbjct: 504 GAILVFLTGWDEISKLLEKI--NMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKR 561
Query: 442 KVVIATNIAETSLTIDGIYYVV 507
K+V+ATNIAE+S+TID + YVV
Sbjct: 562 KIVLATNIAESSITIDDVVYVV 583
Score = 60.9 bits (141), Expect = 6e-10
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVL 184
HER ++ D L +L+ + +RP+L+LI+ SAT++A FS YF +P IPG TFPV L
Sbjct: 355 HERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAEL 414
Query: 185 YTKE 196
+ ++
Sbjct: 415 FLED 418
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/63 (46%), Positives = 47/63 (74%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEV 181
AHER+++TD+L LL++ + +R +L+L++ SAT DA + SQY F+ I + GR FPVE+
Sbjct: 426 AHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEI 485
Query: 182 LYT 190
+Y+
Sbjct: 486 VYS 488
Score = 64.1 bits (149), Expect = 6e-11
Identities = 38/82 (46%), Positives = 47/82 (57%)
Frame = +1
Query: 262 GDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSR 441
G IL FLT Q E++ ACE P I LP++ L E Q +F+ P G R
Sbjct: 522 GTILAFLTSQAEVEWACERFV---------APSAIALPLHGKLSFEEQFMVFQNYP-GRR 571
Query: 442 KVVIATNIAETSLTIDGIYYVV 507
KV+ ATNIAETSLTI G+ YV+
Sbjct: 572 KVIFATNIAETSLTIPGVKYVI 593
>At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to
DEIH-box RNA/DNA helicase GB:BAA84364 GI:5881579
[Arabidopsis thaliana]
Length = 1576
Score = 66.9 bits (156), Expect = 9e-12
Identities = 37/91 (40%), Positives = 54/91 (59%)
Frame = +1
Query: 262 GDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSR 441
G IL+FL G EEI E L + + IIL ++S +P+E Q ++F P G R
Sbjct: 576 GAILVFLPGWEEISKTKEKLLD--DRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCR 633
Query: 442 KVVIATNIAETSLTIDGIYYVVALASLNRKS 534
K+V+ATNIAE+++TID + YV+ + KS
Sbjct: 634 KIVLATNIAESAVTIDDVVYVIDSGRMKEKS 664
Score = 60.5 bits (140), Expect = 8e-10
Identities = 25/61 (40%), Positives = 39/61 (63%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVL 184
HER ++D + +L+ + P L+LI+ SATLDA +FS+YF P+ +PG T+PV
Sbjct: 346 HERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTF 405
Query: 185 Y 187
+
Sbjct: 406 F 406
>At1g58060.1 68414.m06580 helicase domain-containing protein contains
similarity to SP|P24785 Dosage compensation regulator
(Male-less protein) (No action potential protein)
{Drosophila melanogaster}; contains Pfam profiles
PF04408: Helicase associated domain (HA2), PF00271:
Helicase conserved C-terminal domain
Length = 1459
Score = 65.7 bits (153), Expect = 2e-11
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = +1
Query: 262 GDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSR 441
G IL+FL G EI ++L + GP L LP++S++ S Q ++F P G R
Sbjct: 916 GAILIFLPGVAEIYMLLDMLAASYRFRGPAADWL--LPLHSSIASSEQRKVFLRPPKGLR 973
Query: 442 KVVIATNIAETSLTIDGIYYVV 507
KV+ ATNIAETS+TID + YV+
Sbjct: 974 KVIAATNIAETSITIDDVVYVI 995
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKRP------ELKLIVTSATLDAVKFSQYFFEAPIFTIPGRT 166
HER++ D L +LK ++K+ +LK+I+ SAT+DA FS+YF P+ T GRT
Sbjct: 745 HERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRT 804
Query: 167 FPVEVLYTKE 196
PV + +E
Sbjct: 805 HPVTTHFLEE 814
>At2g30800.1 68415.m03755 DEIH-box RNA/DNA helicase, putative
similar to DEIH-box RNA/DNA helicase [Arabidopsis
thaliana] GI:5881579; contains Pfam profiles PF04408:
Helicase associated domain (HA2), PF00271: Helicase
conserved C-terminal domain
Length = 1299
Score = 65.3 bits (152), Expect = 3e-11
Identities = 34/91 (37%), Positives = 55/91 (60%)
Frame = +1
Query: 262 GDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSR 441
G IL+FL G ++I+ + L E D + I+ ++S +P+ Q ++F PPG R
Sbjct: 552 GAILVFLPGWDDINKTRQRLLEN--PFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGCR 609
Query: 442 KVVIATNIAETSLTIDGIYYVVALASLNRKS 534
K+V+ATNIAE+++TID + YV+ + KS
Sbjct: 610 KIVLATNIAESAVTIDDVVYVIDSGRMKEKS 640
Score = 63.7 bits (148), Expect = 9e-11
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVL 184
HER ++D + +++ + P L+LI+ SATLDA +FS YF P+ +PG T+PV L
Sbjct: 316 HERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTL 375
Query: 185 YTKE 196
Y ++
Sbjct: 376 YLED 379
>At1g48650.1 68414.m05445 helicase domain-containing protein
contains similarity to DEIH-box RNA/DNA helicase
[Arabidopsis thaliana] GI:5881579; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, PF00035:
Double-stranded RNA binding motif
Length = 1197
Score = 63.7 bits (148), Expect = 9e-11
Identities = 33/83 (39%), Positives = 55/83 (66%)
Frame = +1
Query: 259 PGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGS 438
PG +L+F+TG ++I++ L E LG D ++++L + ++ S Q IF+ P G
Sbjct: 578 PGAVLVFMTGWDDINSLKNQL-EAHSLLG-DPNKVLLLACHGSMASSEQRLIFDRPPEGI 635
Query: 439 RKVVIATNIAETSLTIDGIYYVV 507
RK+V+ATN+AETS+TI+ + YV+
Sbjct: 636 RKIVLATNMAETSITINDVVYVI 658
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVL 184
HER ++ D L +LK + +RP+LKLI+ SATL+A FS YF AP IPG T+PV
Sbjct: 426 HERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYPVRAH 485
Query: 185 YTKEPETDYLDAS 223
+ + DYL+ S
Sbjct: 486 FLE----DYLETS 494
>At1g58050.1 68414.m06579 helicase domain-containing protein contains
similarity to SP|P24785 Dosage compensation regulator
(Male-less protein) (No action potential protein)
{Drosophila melanogaster}; contains Pfam profiles
PF04408: Helicase associated domain (HA2), PF00271:
Helicase conserved C-terminal domain
Length = 1417
Score = 62.1 bits (144), Expect = 3e-10
Identities = 35/82 (42%), Positives = 49/82 (59%)
Frame = +1
Query: 262 GDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSR 441
G IL+FL G EI+ L + G L LP++S++ S Q ++F P G R
Sbjct: 883 GAILVFLPGMSEINMLLNRLAASYRFRGASGDWL--LPLHSSIASTEQKKVFLRPPKGIR 940
Query: 442 KVVIATNIAETSLTIDGIYYVV 507
KV+IATNIAETS+TI+ + YV+
Sbjct: 941 KVIIATNIAETSITIEDVVYVI 962
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 8/81 (9%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKR------PELKLIVTSATLDAVKFSQYFFEAPIFTIPGRT 166
HER++ D L +LK ++K+ P+LK+I+ SAT+DA +FS+YF + PI T GRT
Sbjct: 725 HERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRT 784
Query: 167 FPVEVLYTKE--PETDYLDAS 223
PV + ++ T YL AS
Sbjct: 785 HPVTTYFLEDIYERTKYLLAS 805
>At2g01130.1 68415.m00021 helicase domain-containing protein similar
to DEIH-box RNA/DNA helicase [Arabidopsis thaliana]
GI:5881579; contains Pfam profiles PF04408: Helicase
associated domain (HA2), PF00271: Helicase conserved
C-terminal domain
Length = 1112
Score = 60.1 bits (139), Expect = 1e-09
Identities = 33/83 (39%), Positives = 52/83 (62%)
Frame = +1
Query: 259 PGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGS 438
PG IL+FLTG ++I + E L PD+ +++L + ++ + Q IFE G
Sbjct: 497 PGGILIFLTGWDDISSLKEKLQIHPIFGNPDL--VMLLACHGSMETFEQRLIFEEPASGV 554
Query: 439 RKVVIATNIAETSLTIDGIYYVV 507
RK+V+ATNIAETS+TI+ + +V+
Sbjct: 555 RKIVLATNIAETSITINDVAFVI 577
Score = 59.7 bits (138), Expect = 1e-09
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPV 175
HER ++ D L +LK + +R ELKLI+ SATLDA FS YF A + IPG T+PV
Sbjct: 346 HERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIYIPGFTYPV 402
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 55.2 bits (127), Expect = 3e-08
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +1
Query: 358 ELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVV 507
+L +LP+Y+ L Q R+FE R VV+ATN+AETSLTI GI YVV
Sbjct: 646 KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVV 695
Score = 46.0 bits (104), Expect = 2e-05
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 28/116 (24%)
Frame = +2
Query: 2 AHERTIHTDVLFGLLKQAVQKRPE-----------------------LKLIVTSATL--- 103
AHER+++TD+L G+L + ++ R E LKLI+ SATL
Sbjct: 369 AHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQITPLKLILMSATLRVE 428
Query: 104 DAVKFSQYFFEAP-IFTIPGRTFPVEVLYTKEPE-TDYLDASLITVMQIHLKGPRG 265
D V + F P + +P R +PV + ++K+ E DY+ + VM IH K P+G
Sbjct: 429 DFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVMSIHKKLPQG 484
Score = 34.3 bits (75), Expect = 0.060
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 256 PPGDILLFLTGQEEIDTACEILYERMKSL 342
P G IL+F+TGQ E+D CE L + K L
Sbjct: 482 PQGGILVFVTGQREVDYLCEKLRKSSKEL 510
>At5g04895.1 68418.m00514 helicase domain-containing protein similar
to DEIH-box RNA/DNA helicase [Arabidopsis thaliana]
GI:5881579;contains Pfam profiles PF04408: Helicase
associated domain (HA2), PF00271: Helicase conserved
C-terminal domain, PF00035: Double-stranded RNA binding
motif
Length = 581
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +1
Query: 403 QTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVV 507
Q IFE APP RK+V+ATN+AE S+TI+ + +VV
Sbjct: 6 QRLIFERAPPNIRKIVLATNMAEASITINDVVFVV 40
>At2g47680.1 68415.m05955 zinc finger (CCCH type) helicase family
protein similar to SP|Q28141 ATP-dependent RNA helicase
A (Nuclear DNA helicase II) (DEAD-box protein 9) {Bos
taurus}; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 1015
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVL 184
HER++ +D++ +KQ + K +L++++ SAT D ++ YF E GR VEV+
Sbjct: 147 HERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKEL------GRGERVEVV 200
Query: 185 YTKEPE 202
P+
Sbjct: 201 AIPSPD 206
Score = 33.9 bits (74), Expect = 0.079
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +1
Query: 439 RKVVIATNIAETSLTIDGIYYVV 507
RKV++ATNIAE+S+TI + YV+
Sbjct: 322 RKVILATNIAESSVTIPKVAYVI 344
>At5g57110.2 68418.m07131 calcium-transporting ATPase 8, plasma
membrane-type / Ca(2+)-ATPase isoform 8 (ACA8) identical
to calcium-transporting ATPase 8, plasma membrane-type
SP:Q9LF79 from [Arabidopsis thaliana]
Length = 1074
Score = 31.1 bits (67), Expect = 0.56
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +1
Query: 385 ALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVALASLN 525
AL +E T PP RK + TNI +L I IY V L +LN
Sbjct: 889 ALATEPPTDHLMGRPPVGRKEPLITNIMWRNLLIQAIYQVSVLLTLN 935
>At5g57110.1 68418.m07130 calcium-transporting ATPase 8, plasma
membrane-type / Ca(2+)-ATPase isoform 8 (ACA8) identical
to calcium-transporting ATPase 8, plasma membrane-type
SP:Q9LF79 from [Arabidopsis thaliana]
Length = 1074
Score = 31.1 bits (67), Expect = 0.56
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +1
Query: 385 ALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVALASLN 525
AL +E T PP RK + TNI +L I IY V L +LN
Sbjct: 889 ALATEPPTDHLMGRPPVGRKEPLITNIMWRNLLIQAIYQVSVLLTLN 935
>At5g06400.1 68418.m00716 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1030
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -3
Query: 136 LEEVLRELDGVERGGRD--DELEFGALLHGLLQQTEQHVGVD 17
LEE L EL E G R D+ +G+++HGLLQ+ + +D
Sbjct: 835 LEEALSELASFE-GERSLLDQYTYGSIVHGLLQRGDLQKALD 875
>At5g55680.1 68418.m06942 glycine-rich protein
Length = 208
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -3
Query: 196 FLGVQ--DFDGEGSTGDGEDRGLEEVLRELDGVERGGRDDELEFGALLHG 53
F+GV+ DFDG+ DGE G E ++DGV + ++ +F G
Sbjct: 128 FVGVKTGDFDGDAVVQDGEVAG--ERTGDIDGVTKAAGEETEDFSGDFEG 175
>At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related
contains weak similarity to Swiss-Prot:P10366 ATP
phosphoribosyltransferase [Escherichia coli]
Length = 1402
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 356 GTSGPKDFILSYNISHAVSISSWPV 282
G SG + F+LS N H++S S +PV
Sbjct: 929 GGSGGQPFVLSQNFLHSISKSPFPV 953
>At4g02010.1 68417.m00271 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 725
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 446 TFLEPGGAGSKIRVCISDGSAEYTGRIISSGTSGPKDF 333
+ L GG G R ++DG+A ++ S G G K+F
Sbjct: 384 SILGEGGFGKVYRGILADGTAVAIKKLTSGGPQGDKEF 421
>At2g35350.1 68415.m04334 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2c
(GI:3608412) [Mesembryanthemum crystallinum]; contains
Pfam PF00481 : Protein phosphatase 2C domain
Length = 783
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 343 GPDVPELIILPVYSALPSEMQTRIFE 420
GPD PE ++ +Y A+ SE+Q +E
Sbjct: 299 GPDAPEFLMANLYRAVHSELQGLFWE 324
>At1g70100.3 68414.m08067 expressed protein
Length = 504
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 211 IVRLRFLGVQ-DFDGEGSTGDGEDRGLEEVLRELDGVERGG 92
IVR F Q FD ST DG+D ++VL + V+R G
Sbjct: 371 IVRRAFKSFQKSFDQMKSTDDGQDTAPKQVLAKATAVQRLG 411
>At1g70100.2 68414.m08066 expressed protein
Length = 482
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 211 IVRLRFLGVQ-DFDGEGSTGDGEDRGLEEVLRELDGVERGG 92
IVR F Q FD ST DG+D ++VL + V+R G
Sbjct: 371 IVRRAFKSFQKSFDQMKSTDDGQDTAPKQVLAKATAVQRLG 411
>At1g70100.1 68414.m08065 expressed protein
Length = 467
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 211 IVRLRFLGVQ-DFDGEGSTGDGEDRGLEEVLRELDGVERGG 92
IVR F Q FD ST DG+D ++VL + V+R G
Sbjct: 371 IVRRAFKSFQKSFDQMKSTDDGQDTAPKQVLAKATAVQRLG 411
>At5g50410.1 68418.m06243 expressed protein
Length = 259
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +1
Query: 238 ADPPEGPPGDILLFLTGQEEIDTACEILYERMKSLGP 348
ADP P D L+ T Q+E EIL E K L P
Sbjct: 213 ADPMSNIPKDSDLYRTKQKEAKRRFEILVELEKRLAP 249
>At5g41620.1 68418.m05057 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 (GI:2773363)
[Drosophila melanogaster]; weak similarity to
Synaptonemal complex protein 1 (SCP-1 protein)
(Swiss-Prot:Q15431) [Homo sapiens]; weak similarity to
DNA double-strand break repair rad50 ATPase.
(Swiss-Prot:P58301) [Pyrococcus furiosus]
Length = 543
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -1
Query: 489 VDGQRRLRDVGGDHHLPGAGGRRLEDPGLHLGRQRRVHRQNYQLRHVRPQGLHSLVQYLT 310
+D + LRD DH AG R + + + + + R N+ L+ V P S ++ T
Sbjct: 29 LDLSQFLRDPSPDHQPDSAGSLRRQIGQMLIKHHQSIDRNNHALQPVSPASYGSSLEVTT 88
>At5g15020.1 68418.m01761 paired amphipathic helix repeat-containing
protein similar to transcription co-repressor Sin3
[Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 1377
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = -3
Query: 181 DFDGEGSTGDGEDR-GLEEVLREL----DGVERGGRDDELEFGALLHGLLQQTEQHVGVD 17
D DG+ ++ GED G E + E +GVE G DE++ A G + E H+ D
Sbjct: 1012 DEDGDDASEAGEDASGTESIGDECSQDDNGVEEEGEHDEIDGKAESEGEAEGMESHLIED 1071
Query: 16 GAL 8
L
Sbjct: 1072 KGL 1074
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/61 (22%), Positives = 25/61 (40%)
Frame = +2
Query: 5 HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVL 184
H + + F L+K PEL L V+ + + YF+ A + IP + +
Sbjct: 536 HANYLMGSLFFSLIKLLADGLPELTLTVSRIAVFCKQKELYFYPAWAYAIPSAILKIPIS 595
Query: 185 Y 187
+
Sbjct: 596 F 596
>At4g04500.1 68417.m00653 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 646
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -2
Query: 488 SMVSDVSAMLVAITTFLEPGGAGSKIRVCISDGSAEYTGRIISSGTSGP 342
+ +SDV A++ + L PG +R C++D ++ GR G S P
Sbjct: 195 TQISDVYALMQCVPD-LSPGNCKRCLRECVNDFQKQFWGR-QGGGVSRP 241
>At2g21680.1 68415.m02579 kelch repeat-containing F-box family
protein low similarity to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 414
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -1
Query: 483 GQRRLRDVGGDHHLPGAGGRRLEDP--GLHLGRQR 385
G++ L DVG ++ P +GGRR E G H G +R
Sbjct: 153 GEKLLEDVGVGYNKPISGGRRGETSIRGGHAGERR 187
>At1g80030.3 68414.m09368 DNAJ heat shock protein, putative similar
to SP|Q05646 Chaperone protein dnaJ {Erysipelothrix
rhusiopathiae}; contains Pfam profiles PF00226: DnaJ
domain, PF01556: DnaJ C terminal region, PF00684: DnaJ
central domain (4 repeats)
Length = 500
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 193 GTGDGLFGRLTDHGHADPPEGPPGDILLFL 282
G G R+ G + P GPPGD+ ++L
Sbjct: 301 GVSAGSILRVAGEGDSGPRGGPPGDLYVYL 330
>At1g80030.2 68414.m09367 DNAJ heat shock protein, putative similar
to SP|Q05646 Chaperone protein dnaJ {Erysipelothrix
rhusiopathiae}; contains Pfam profiles PF00226: DnaJ
domain, PF01556: DnaJ C terminal region, PF00684: DnaJ
central domain (4 repeats)
Length = 500
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 193 GTGDGLFGRLTDHGHADPPEGPPGDILLFL 282
G G R+ G + P GPPGD+ ++L
Sbjct: 301 GVSAGSILRVAGEGDSGPRGGPPGDLYVYL 330
>At1g80030.1 68414.m09366 DNAJ heat shock protein, putative similar
to SP|Q05646 Chaperone protein dnaJ {Erysipelothrix
rhusiopathiae}; contains Pfam profiles PF00226: DnaJ
domain, PF01556: DnaJ C terminal region, PF00684: DnaJ
central domain (4 repeats)
Length = 500
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 193 GTGDGLFGRLTDHGHADPPEGPPGDILLFL 282
G G R+ G + P GPPGD+ ++L
Sbjct: 301 GVSAGSILRVAGEGDSGPRGGPPGDLYVYL 330
>At1g55540.1 68414.m06356 proline-rich family protein contains
proline rich extensin domain, INTERPRO:IPR002965
Length = 915
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -3
Query: 358 PARPAPRTSFSRTISHTPCQSLLGQ 284
P++PA SFS T S TP QS GQ
Sbjct: 711 PSQPAGFGSFSVTPSQTPAQSGFGQ 735
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -1
Query: 159 PGMVKIGASKKYCENLTASSVADVTMSLSSGRFCTACFSRPNSTSVW 19
PG + G++ ENL A+ ++ M+ S +F + + R +S+ W
Sbjct: 583 PGSISKGSATWPEENLPANPLSTSAMNASHYKFLKSSYQRASSSLSW 629
>At4g30180.1 68417.m04291 expressed protein
Length = 158
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 190 GVQDFDGEGSTGDGEDRGLEEVLRELDGVERGGRDDELE 74
G++ + G E+ G+EE LREL + GG + +E
Sbjct: 92 GIRILERPDKEGGNEEGGIEERLRELKKLLPGGEEMNVE 130
>At3g09350.1 68416.m01109 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 363
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 298 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEP 423
+D I Y SL L++LP ALP ++ +++FEP
Sbjct: 300 VDLLWSICYNEPSSLREK--GLVVLPGEDALPPDVASKLFEP 339
>At1g01930.1 68414.m00111 zinc finger protein-related contains Pfam
PF00023: Ankyrin repeat; contains Pfam PF00096: Zinc
finger, C2H2 type domain and Prosite PS00028: Zinc
finger, C2H2 type, domain
Length = 580
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 242 IHLKGPRGIS--CCSSLAKKRLTRRVRYCTRE 331
+ + RG+S CC SL + +T R+R RE
Sbjct: 182 VSFENDRGVSVDCCGSLVENEVTERLRNLIRE 213
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.137 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,185,083
Number of Sequences: 28952
Number of extensions: 271081
Number of successful extensions: 1069
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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